Result of FASTA (omim) for
pFN21AE5083
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5083, 977 aa
1>>>pF1KE5083 977 - 977 aa - 977 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2287+/-0.000394; mu= 6.8387+/- 0.025
mean_var=325.6394+/-66.800, 0's: 0 Z-trim(122.2): 71 B-trim: 0 in 0/58
Lambda= 0.071073
statistics sampled from 39898 (39977) to 39898 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.469), width: 16
Scan time: 16.730
The best scores are: opt bits E(85289)
NP_073605 (OMIM: 606077) putative RNA-binding prot ( 977) 6559 687.1 1.2e-196
NP_001188474 (OMIM: 606077) putative RNA-binding p ( 969) 6412 672.0 4e-192
NP_037418 (OMIM: 612602) putative RNA-binding prot ( 890) 1438 162.0 1.3e-38
NP_055816 (OMIM: 613484) msx2-interacting protein (3664) 448 61.2 1.2e-07
>>NP_073605 (OMIM: 606077) putative RNA-binding protein (977 aa)
initn: 6559 init1: 6559 opt: 6559 Z-score: 3651.6 bits: 687.1 E(85289): 1.2e-196
Smith-Waterman score: 6559; 100.0% identity (100.0% similar) in 977 aa overlap (1-977:1-977)
10 20 30 40 50 60
pF1KE5 MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDLRRPATMKGKERSPVKAKRSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDLRRPATMKGKERSPVKAKRSRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 GEDSTSRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 GEDSTSRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 SRLHSYSSPSTKNSSGGGESRSSSRGGGGESRSSGAASSAPGGGDGAEYKTLKISELGSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 SRLHSYSSPSTKNSSGGGESRSSSRGGGGESRSSGAASSAPGGGDGAEYKTLKISELGSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 LSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 YDRPLKIEAVYVSRRRSRSPLDKDTYPPSASVVGASVGGHRHPPGGGGGQRSLSPGGAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 YDRPLKIEAVYVSRRRSRSPLDKDTYPPSASVVGASVGGHRHPPGGGGGQRSLSPGGAAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 GYRDYRLQQLALGRLPPPPPPPLPRDLERERDYPFYERVRPAYSLEPRVGAGAGAAPFRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 GYRDYRLQQLALGRLPPPPPPPLPRDLERERDYPFYERVRPAYSLEPRVGAGAGAAPFRE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 VDEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 VDEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 FENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 FENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 IRTIDYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQYLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 IRTIDYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQYLQP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 LPLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVPPPPPVRERSTRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 LPLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVPPPPPVRERSTRT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 AATSVPAYEPLDSLDRRRDGWSLDRDRGDRDLPSSRDQPRKRRLPEESGGRHLDRSPESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 AATSVPAYEPLDSLDRRRDGWSLDRDRGDRDLPSSRDQPRKRRLPEESGGRHLDRSPESD
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE5 RPRKRHCAPSPDRSPELSSSRDRYNSDNDRSSRLLLERPSPIRDRRGSLEKSQGDKRDRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 RPRKRHCAPSPDRSPELSSSRDRYNSDNDRSSRLLLERPSPIRDRRGSLEKSQGDKRDRK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE5 NSASAERDRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 NSASAERDRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE5 SPKLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 SPKLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE5 KLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 KLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQA
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE5 AGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVMIIVRGFGFQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 AGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVMIIVRGFGFQI
910 920 930 940 950 960
970
pF1KE5 GVRYENKKRENLALTLL
:::::::::::::::::
NP_073 GVRYENKKRENLALTLL
970
>>NP_001188474 (OMIM: 606077) putative RNA-binding prote (969 aa)
initn: 6412 init1: 6412 opt: 6412 Z-score: 3570.2 bits: 672.0 E(85289): 4e-192
Smith-Waterman score: 6412; 100.0% identity (100.0% similar) in 954 aa overlap (1-954:1-954)
10 20 30 40 50 60
pF1KE5 MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDLRRPATMKGKERSPVKAKRSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDLRRPATMKGKERSPVKAKRSRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 GEDSTSRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEDSTSRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 SRLHSYSSPSTKNSSGGGESRSSSRGGGGESRSSGAASSAPGGGDGAEYKTLKISELGSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRLHSYSSPSTKNSSGGGESRSSSRGGGGESRSSGAASSAPGGGDGAEYKTLKISELGSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 YDRPLKIEAVYVSRRRSRSPLDKDTYPPSASVVGASVGGHRHPPGGGGGQRSLSPGGAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YDRPLKIEAVYVSRRRSRSPLDKDTYPPSASVVGASVGGHRHPPGGGGGQRSLSPGGAAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 GYRDYRLQQLALGRLPPPPPPPLPRDLERERDYPFYERVRPAYSLEPRVGAGAGAAPFRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYRDYRLQQLALGRLPPPPPPPLPRDLERERDYPFYERVRPAYSLEPRVGAGAGAAPFRE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 VDEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 FENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 IRTIDYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQYLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRTIDYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQYLQP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 LPLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVPPPPPVRERSTRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVPPPPPVRERSTRT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 AATSVPAYEPLDSLDRRRDGWSLDRDRGDRDLPSSRDQPRKRRLPEESGGRHLDRSPESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AATSVPAYEPLDSLDRRRDGWSLDRDRGDRDLPSSRDQPRKRRLPEESGGRHLDRSPESD
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE5 RPRKRHCAPSPDRSPELSSSRDRYNSDNDRSSRLLLERPSPIRDRRGSLEKSQGDKRDRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPRKRHCAPSPDRSPELSSSRDRYNSDNDRSSRLLLERPSPIRDRRGSLEKSQGDKRDRK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE5 NSASAERDRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSASAERDRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE5 SPKLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPKLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE5 KLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQA
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE5 AGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVMIIVRGFGFQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVMIIVRAKLVEQ
910 920 930 940 950 960
970
pF1KE5 GVRYENKKRENLALTLL
NP_001 RMKIWNSKL
>>NP_037418 (OMIM: 612602) putative RNA-binding protein (890 aa)
initn: 1852 init1: 892 opt: 1438 Z-score: 814.3 bits: 162.0 E(85289): 1.3e-38
Smith-Waterman score: 2147; 45.8% identity (66.4% similar) in 934 aa overlap (59-954:14-887)
30 40 50 60 70 80
pF1KE5 RRVTQLRGDDLRRPATMKGKERSPVKAKRSRGGEDSTSRG---ERSKKLGGSGGSNGSSS
::. .:..: :: . :: ... .:.
NP_037 MKRQSERDSSPSGRGSSSSAKRPREREREAEAGGRRAAHKASG
10 20 30 40
90 100 110 120 130 140
pF1KE5 GKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSSSSRLHSYSSPSTKNSSGG-GESRSSS
: . :. ..:. :: :. : :... : : : .. ..:: : . :..
NP_037 GAKHPVPARARDKPRGSGSGGGGHRD-GRGTGDANHRASSGRSSGSGAGGGGRGGKASGD
50 60 70 80 90 100
150 160 170 180 190
pF1KE5 RGGGGES-RSS---------GAASSAPGGGDGA-EYKTLKISELGSQLSDEAVEDGLFHE
:..: : :.: :: . ::.. .: ::::: :: :. : : .:: :::.
NP_037 PGASGMSPRASPLPPPPPPPGAEPACPGSSAAAPEYKTLLISSLSPALPAEHLEDRLFHQ
110 120 130 140 150 160
200 210 220 230 240 250
pF1KE5 FKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDARAAK-HARGR-LVLYDRPLKIEAVY
:::::..:...:: : :::.::::.:.::: :. :: .: :.:::::::.: ::
NP_037 FKRFGEISLRLSHTPELG----RVAYVNFRHPQDAREARQHALARQLLLYDRPLKVEPVY
170 180 190 200 210
260 270 280 290 300
pF1KE5 V------SRRRSRSPLDKDTYPPSASVVGASVGGHRHPPGGGG---GQRSLSPGGAALGY
. ::: : : .: ::. . . .: . : :: :::::: ::
NP_037 LRGGGGSSRRSSSSSAAASTPPPGPPAPADPLG---YLPLHGGYQYKQRSLSPV-AAPPL
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE5 RDYRLQQLALG-RLPPPPPPPLPRDLERERDYPFYERVRPAYSLEPRVGAGAGAAPFREV
:. : .. : . : . . :: :: :.: : : :
NP_037 REPRARHAAAAFALDAAAAAAVGLSRERALDY---------YGLYDDRGRPYGYPAVCEE
280 290 300 310 320
370 380 390 400 410 420
pF1KE5 DEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKF
: . :::::::.:.::.:::: .:.: .:::::...:.: :: ::::.::: ..:.::::
NP_037 D-LMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKF
330 340 350 360 370 380
430 440 450 460 470 480
pF1KE5 ENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGTI
.::::.::::.::::..: :::::::::::.:::::::::::: . ::::::::::::.:
NP_037 QNLDMAHRAKVAMSGRVIGRNPIKIGYGKANPTTRLWVGGLGPNTSLAALAREFDRFGSI
390 400 410 420 430 440
490 500 510 520 530 540
pF1KE5 RTIDYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEH-RYQQQYLQP
::::. ::::.:::::::::::.:: ..:::::::::::::::::: .:. :: ::: ::
NP_037 RTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETRYPQQY-QP
450 460 470 480 490 500
550 560 570 580 590
pF1KE5 LPL-THYELVTDAFG-HRAPDPLRGARDRTPP-LLYRDRDRDLYPDSDWVPPPPPVRERS
:: .::::.::.. :: : .:::::: ::: :::: . ..::. : .:.
NP_037 SPLPVHYELLTDGYTRHRNLDA-DLVRDRTPPHLLYSDRDRTFL-EGDWTSPSKSSDRRN
510 520 530 540 550 560
600 610 620 630 640 650
pF1KE5 TRTAATSVPAYEPLDSLDRRRDG--WSLDRDRGDRDLPSSRDQPRKRRLPEESGGRHLDR
:. .: :. : :.: :. : ::: ::. .. ::::
NP_037 ------SLEGYS--RSV-RSRSGERWGAD---GDRGLPKPWEERRKRR------------
570 580 590
660 670 680 690 700 710
pF1KE5 SPESDRPRKRHCAPSPDRSPELSSSRDRYNSDNDRSSRLLLERPSPIRDRRGSLEKSQGD
: ::: : : .: .:: . ..: .. . .::. : :.:. . ..:.:
NP_037 SLSSDRGRTTH-SPYEERS-RTKGSGQQSERGSDRT---------PERSRKEN-HSSEGT
600 610 620 630 640
720 730 740 750 760 770
pF1KE5 KRDRKNSASAER----DRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSK-LKSPSQKQ
:.. .:: : : .: :. . : :. :.. :. : : :. : ...
NP_037 KESSSNSLSNSRHGAEERGHHHHHHEAADSSHGKKARDSERNHRTTEAEPKPLEEP-KHE
650 660 670 680 690 700
780 790 800 810 820 830
pF1KE5 DGGTAPVASASPKLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLK
.. . : :.:.:.:.:::: ::..::.:.:: : :::: . ..:.:..:::
NP_037 TKKLKNLSEYAQTLQLGWNGLLVLKNSCFPTSMHILEGDQGVISSLLKDHTSGSKLTQLK
710 720 730 740 750 760
840 850 860 870 880 890
pF1KE5 ITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRN
:.:::::::::::::::::: ..:::::.:::. .. .. .. . . . . . .: :::
NP_037 IAQRLRLDQPKLDEVTRRIKQGSPNGYAVLLATQATPSGLGTEGMPTVEPGLQ-RRLLRN
770 780 790 800 810 820
900 910 920 930 940 950
pF1KE5 LVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVM
::::::::::::::::::::.: ...::.:.:::::.::::.:.: ..:.: ::...:.
NP_037 LVSYLKQKQAAGVISLPVGGSKGRDGTGMLYAFPPCDFSQQYLQSALRTLGKLEEEHMVI
830 840 850 860 870 880
960 970
pF1KE5 IIVRGFGFQIGVRYENKKRENLALTLL
.:::
NP_037 VIVRDTA
890
>>NP_055816 (OMIM: 613484) msx2-interacting protein [Hom (3664 aa)
initn: 420 init1: 193 opt: 448 Z-score: 258.4 bits: 61.2 E(85289): 1.2e-07
Smith-Waterman score: 532; 26.3% identity (50.0% similar) in 792 aa overlap (10-776:199-851)
10 20 30
pF1KE5 MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDL
:: :: :. : :. .: .. ::.
NP_055 YYRDPRERTLQHGLYYASRSRSPNRFDAHDPRYEPRAREQFTL--PSVVHR--DIYRDDI
170 180 190 200 210 220
40 50 60 70 80 90
pF1KE5 RRPATMKGKERSPVKAKRSRGGEDSTSRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLH
: . . ::. . .:::. ..: ::.. ..:. :..: .. ::.:::
NP_055 TREVRGRRPERN-YQHSRSRSPHSSQSRNQSPQRLA----SQASRPTRSPSGSGSR----
230 240 250 260 270
100 110 120 130 140 150
pF1KE5 LDKSSSRGGSREYDTGGGSSSSRLHSYSSPSTKNSSGGGESRSSSRGGGGESRSSGAASS
:: .. . :::: : :: :...:: . .:: .... . .: ::
NP_055 ---------SRSSSSDSISSSSSTSSDSSDSSSSSSDDSPARSV-QSAAVPAPTSQLLSS
280 290 300 310 320
160 170 180 190 200 210
pF1KE5 APGGGDGAEYKTLKISELGSQLSDEAVEDGLFHEFKRFGDV-SVKISHLSGSGSGDERVA
. .:...: . .: ...::::::::.:: : ::.: : :...:: .
NP_055 LEKDEPRKSFG-IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQI-H----GTSEERYG
330 340 350 360 370
220 230 240 250 260 270
pF1KE5 FVNFRRPEDARAAKHA-RGRLVLYDRPLKIEAVYVSRRRSRSPLDKDTYPPSASVVGASV
.: ::. :: . : : .:.: . ..:: : : .
NP_055 LVFFRQQEDQEKALTASKGKLFF---GMQIE------------------------VTAWI
380 390 400 410
280 290 300 310 320 330
pF1KE5 GGHRHPPGGGGGQRSLSPGGAALGYRDYRLQQLALGRLPPPPPPPLPRDLERERDYPFYE
: : : : . :
NP_055 G----P--------------------------------------------ETESENEF--
420
340 350 360 370 380 390
pF1KE5 RVRPAYSLEPRVGAGAGAAPFREVDEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRF
:: :. :. ::. : .:.::::.:::. :.: ::: :.::
NP_055 --RP---LDERI------------DEFHP----KATRTLFIGNLEKTTTYHDLRNIFQRF
430 440 450 460
400 410 420 430 440 450
pF1KE5 GVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRL
: :...:::. . : . :.::.. .. .: :.:. . : .:.:.::. ::. .
NP_055 GEIVDIDIKKVN-G-VPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPTNCV
470 480 490 500 510
460 470 480 490 500 510
pF1KE5 WVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGG
:. ::. : :.:.: :.: . . . . . : . :. .. :.:: . .: .::
NP_055 WLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKGRKIGG
520 530 540 550 560 570
520 530 540 550 560 570
pF1KE5 PDRRLRVDFADTEHRYQQQYLQPLPLTHYELVTDAFGHRAP--DPLRGARDRTPPLLYRD
...::::. : : . . . . . . : . : . :.. : . : .
NP_055 --NKIKVDFANRES--QLAFYHCMEKSGQD-IRDFYEMLAERREERRASYDYNQDRTYYE
580 590 600 610 620 630
580 590 600 610 620
pF1KE5 --RDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYE------PLDSLDRRRDGWSLD-RD
: ::... : :: .. . . :: : . : : : . : :.
NP_055 SVRTPGTYPEDSRRDYPARGREFYSEWETYQGDYYESRYYDDPREYRDYRNDPYEQDIRE
640 650 660 670 680 690
630 640 650 660 670 680
pF1KE5 RGDRDLPSSRDQPRKRRLPEESGGRHLDRSP--ESDRPR--KRHCAP--SPDRSPELSSS
. :. :.. :.:. : . : .: : .:. : .: .: ::... .: :.
NP_055 YSYRQ----RERERERERFESDRDRDHERRPIERSQSPVHLRRPQSPGASPSQAERLPSD
700 710 720 730 740 750
690 700 710 720 730
pF1KE5 RDR--YNSDNDRS-SRLLLERPSPIRDRRGSLEK-SQGDKRDRKNSASAERDRKHRTTAP
.: :. ..::: : : : . .. ::. ....: :.. . . :: ...:
NP_055 SERRLYSRSSDRSGSCSSLSPPRYEKLDKSRLERYTKNEKTDKERTFDPERVERERRLIR
760 770 780 790 800 810
740 750 760 770 780 790
pF1KE5 TEG--KSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASASPKLCLAWQGMLLL
: :. :. :. :.. : :. ::. . ...... :
NP_055 KEKVEKDKTDKQKRK-GKVHSPSSQSSETDQENEREQSPEKPRSCNKLSREKADKEGIAK
820 830 840 850 860
800 810 820 830 840 850
pF1KE5 KNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKLDEVTRRIKVAGP
NP_055 NRLELMPCVVLTRVKEKEGKVIDHTPVEKLKAKLDNDTVKSSALDQKLQVSQTEPAKSDL
870 880 890 900 910 920
977 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:51:54 2016 done: Tue Nov 8 04:51:57 2016
Total Scan time: 16.730 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]