Result of FASTA (omim) for
pFN21AE5064
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5064, 554 aa
1>>>pF1KE5064 554 - 554 aa - 554 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7114+/-0.000372; mu= 7.9110+/- 0.023
mean_var=141.5901+/-28.308, 0's: 0 Z-trim(117.5): 153 B-trim: 0 in 0/55
Lambda= 0.107785
statistics sampled from 29372 (29542) to 29372 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.674), E-opt: 0.2 (0.346), width: 16
Scan time: 10.950
The best scores are: opt bits E(85289)
NP_000800 (OMIM: 137141) gamma-aminobutyric acid r ( 554) 3621 574.9 2.3e-163
NP_001191195 (OMIM: 137141) gamma-aminobutyric aci ( 535) 3442 547.0 5.5e-155
NP_000802 (OMIM: 137143) gamma-aminobutyric acid r ( 453) 1901 307.3 6.5e-83
NP_001191196 (OMIM: 137141) gamma-aminobutyric aci ( 484) 1691 274.7 4.6e-73
NP_000799 (OMIM: 305660) gamma-aminobutyric acid r ( 492) 1653 268.8 2.8e-71
NP_001121116 (OMIM: 137160,611136,615744) gamma-am ( 456) 1611 262.2 2.4e-69
NP_001121115 (OMIM: 137160,611136,615744) gamma-am ( 456) 1611 262.2 2.4e-69
NP_001121120 (OMIM: 137160,611136,615744) gamma-am ( 456) 1611 262.2 2.4e-69
NP_001121117 (OMIM: 137160,611136,615744) gamma-am ( 456) 1611 262.2 2.4e-69
NP_000797 (OMIM: 137160,611136,615744) gamma-amino ( 456) 1611 262.2 2.4e-69
XP_005268315 (OMIM: 137142) PREDICTED: gamma-amino ( 462) 1570 255.9 2.1e-67
XP_006720522 (OMIM: 137142) PREDICTED: gamma-amino ( 462) 1570 255.9 2.1e-67
NP_001158509 (OMIM: 137142) gamma-aminobutyric aci ( 462) 1570 255.9 2.1e-67
NP_000801 (OMIM: 137142) gamma-aminobutyric acid r ( 462) 1570 255.9 2.1e-67
XP_016863472 (OMIM: 103780,137140) PREDICTED: gamm ( 451) 1561 254.5 5.3e-67
NP_000798 (OMIM: 103780,137140) gamma-aminobutyric ( 451) 1561 254.5 5.3e-67
NP_001107647 (OMIM: 103780,137140) gamma-aminobuty ( 451) 1561 254.5 5.3e-67
XP_016863471 (OMIM: 103780,137140) PREDICTED: gamm ( 451) 1561 254.5 5.3e-67
NP_001317619 (OMIM: 103780,137140) gamma-aminobuty ( 511) 1561 254.5 5.9e-67
XP_011511977 (OMIM: 103780,137140) PREDICTED: gamm ( 511) 1561 254.5 5.9e-67
XP_005248137 (OMIM: 103780,137140) PREDICTED: gamm ( 396) 1337 219.6 1.5e-56
NP_001273756 (OMIM: 103780,137140) gamma-aminobuty ( 456) 1337 219.6 1.6e-56
XP_006724874 (OMIM: 305660) PREDICTED: gamma-amino ( 340) 1289 212.1 2.3e-54
XP_016877545 (OMIM: 137142) PREDICTED: gamma-amino ( 306) 1268 208.8 2e-53
XP_016877544 (OMIM: 137142) PREDICTED: gamma-amino ( 306) 1268 208.8 2e-53
NP_000807 (OMIM: 137164,607681,611277) gamma-amino ( 467) 1237 204.1 8e-52
NP_944494 (OMIM: 137164,607681,611277) gamma-amino ( 475) 1234 203.6 1.1e-51
NP_775807 (OMIM: 137166) gamma-aminobutyric acid r ( 465) 1225 202.2 2.9e-51
XP_011519732 (OMIM: 600233) PREDICTED: gamma-amino ( 473) 1179 195.1 4.2e-49
NP_150092 (OMIM: 600233) gamma-aminobutyric acid r ( 467) 1176 194.6 5.8e-49
NP_004952 (OMIM: 300093) gamma-aminobutyric acid r ( 506) 1027 171.5 5.8e-42
XP_016863479 (OMIM: 137166) PREDICTED: gamma-amino ( 336) 964 161.6 3.7e-39
XP_016877547 (OMIM: 600233) PREDICTED: gamma-amino ( 361) 944 158.5 3.4e-38
XP_016877548 (OMIM: 600233) PREDICTED: gamma-amino ( 355) 941 158.0 4.6e-38
XP_011543797 (OMIM: 305990) PREDICTED: glycine rec ( 436) 907 152.8 2.1e-36
XP_006724550 (OMIM: 305990) PREDICTED: glycine rec ( 436) 907 152.8 2.1e-36
XP_011543798 (OMIM: 305990) PREDICTED: glycine rec ( 436) 907 152.8 2.1e-36
NP_002054 (OMIM: 305990) glycine receptor subunit ( 452) 907 152.8 2.2e-36
NP_001112357 (OMIM: 305990) glycine receptor subun ( 452) 907 152.8 2.2e-36
NP_001036008 (OMIM: 600421) glycine receptor subun ( 449) 906 152.6 2.4e-36
XP_016884916 (OMIM: 305990) PREDICTED: glycine rec ( 452) 905 152.5 2.7e-36
NP_001112358 (OMIM: 305990) glycine receptor subun ( 452) 905 152.5 2.7e-36
XP_016884875 (OMIM: 300093) PREDICTED: gamma-amino ( 393) 901 151.8 3.7e-36
XP_016884878 (OMIM: 300093) PREDICTED: gamma-amino ( 267) 897 151.1 4.1e-36
NP_006520 (OMIM: 600421) glycine receptor subunit ( 464) 899 151.5 5.3e-36
XP_016864119 (OMIM: 600421) PREDICTED: glycine rec ( 424) 889 150.0 1.4e-35
NP_001139512 (OMIM: 138491,149400) glycine recepto ( 457) 885 149.4 2.4e-35
NP_000162 (OMIM: 138491,149400) glycine receptor s ( 449) 876 148.0 6.1e-35
XP_016864838 (OMIM: 138491,149400) PREDICTED: glyc ( 465) 875 147.8 7e-35
XP_016856425 (OMIM: 137163,613060) PREDICTED: gamm ( 687) 873 147.6 1.2e-34
>>NP_000800 (OMIM: 137141) gamma-aminobutyric acid recep (554 aa)
initn: 3621 init1: 3621 opt: 3621 Z-score: 3053.7 bits: 574.9 E(85289): 2.3e-163
Smith-Waterman score: 3621; 100.0% identity (100.0% similar) in 554 aa overlap (1-554:1-554)
10 20 30 40 50 60
pF1KE5 MVSAKKVPAIALSAGVSFALLRFLCLAVCLNESPGQNQKEEKLCTENFTRILDSLLDGYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MVSAKKVPAIALSAGVSFALLRFLCLAVCLNESPGQNQKEEKLCTENFTRILDSLLDGYD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKPPQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 EVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTVVQES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 EVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTVVQES
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 SKGTPRSYLASSPNPFSRANAAETISAARALPSASPTSIRTGYMPRKASVGSASTRHVFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SKGTPRSYLASSPNPFSRANAAETISAARALPSASPTSIRTGYMPRKASVGSASTRHVFG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 SRLQRIKTTVNTIGATGKLSATPPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SRLQRIKTTVNTIGATGKLSATPPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVV
490 500 510 520 530 540
550
pF1KE5 YLSKDTMEKSESLM
::::::::::::::
NP_000 YLSKDTMEKSESLM
550
>>NP_001191195 (OMIM: 137141) gamma-aminobutyric acid re (535 aa)
initn: 3440 init1: 3440 opt: 3442 Z-score: 2903.5 bits: 547.0 E(85289): 5.5e-155
Smith-Waterman score: 3442; 98.5% identity (98.9% similar) in 535 aa overlap (20-554:1-535)
10 20 30 40 50 60
pF1KE5 MVSAKKVPAIALSAGVSFALLRFLCLAVCLNESPGQNQKEEKLCTENFTRILDSLLDGYD
.:. : :::::::::::::::::::::::::::::::
NP_001 MLQRWFLPRSLNESPGQNQKEEKLCTENFTRILDSLLDGYD
10 20 30 40
70 80 90 100 110 120
pF1KE5 NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE5 NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE5 MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE5 GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE5 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKPPQ
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE5 EVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTVVQES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTVVQES
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE5 SKGTPRSYLASSPNPFSRANAAETISAARALPSASPTSIRTGYMPRKASVGSASTRHVFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKGTPRSYLASSPNPFSRANAAETISAARALPSASPTSIRTGYMPRKASVGSASTRHVFG
410 420 430 440 450 460
490 500 510 520 530 540
pF1KE5 SRLQRIKTTVNTIGATGKLSATPPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRLQRIKTTVNTIGATGKLSATPPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVV
470 480 490 500 510 520
550
pF1KE5 YLSKDTMEKSESLM
::::::::::::::
NP_001 YLSKDTMEKSESLM
530
>>NP_000802 (OMIM: 137143) gamma-aminobutyric acid recep (453 aa)
initn: 2112 init1: 1888 opt: 1901 Z-score: 1609.6 bits: 307.3 E(85289): 6.5e-83
Smith-Waterman score: 1977; 63.0% identity (74.9% similar) in 533 aa overlap (21-553:5-452)
10 20 30 40 50 60
pF1KE5 MVSAKKVPAIALSAGVSFALLRFLCLAVCLNESPGQNQKEEKLCTENFTRILDSLLDGYD
: .::. . :... :. . : .. .:: .::::.::.:::
NP_000 MASSLPWLCIILWLENALGKLEVEGNFYSENVSRILDNLLEGYD
10 20 30 40
70 80 90 100 110 120
pF1KE5 NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
::::::::: ::::::::::::::::::::::::::::::::: :.:::. :: ::: ::
NP_000 NRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE5 NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
:.::.:.:::::::::::::..::::.::::::::.::::::::::::.:.::::::.::
NP_000 NLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFP
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE5 MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
:::::::::::::::::::.:::: ::: :::::.:::::.:::::::::::::::: :
NP_000 MDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNT
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE5 GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
:::..:::::::.::::::::: : :::::::::::::::::::::::::::::::::::
NP_000 GEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE5 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKPPQ
:::::::::::::::::::::::::::::::::::::::::::::.: .:::::.
NP_000 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQKAKRKA-----
290 300 310 320 330
370 380 390 400 410 420
pF1KE5 EVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTVVQES
. : :. .. ::. .. ..: .: : .: :
NP_000 QFAAPPTVTISKATEPLE-----------AEIVLHPDSKY--------HLKKRIT-----
340 350 360 370
430 440 450 460 470 480
pF1KE5 SKGTPRSYLASSPNPFSRANAAETISAARALPSASPTSIRTGYMPRKASVGSASTRHVFG
: . : ..:: :.:: . : :: : . : .
NP_000 SLSLP---IVSS----SEANKVLT----RA-PILQSTPV---------------------
380 390 400
490 500 510 520 530 540
pF1KE5 SRLQRIKTTVNTIGATGKLSATPPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVV
:::: . :. .::::::.:.::::::.:..::.:::::
NP_000 ---------------------TPPPLS--PAFGGTSKIDQYSRILFPVAFAGFNLVYWVV
410 420 430
550
pF1KE5 YLSKDTMEKSESLM
:::::::: : :.
NP_000 YLSKDTMEVSSSVE
440 450
>>NP_001191196 (OMIM: 137141) gamma-aminobutyric acid re (484 aa)
initn: 1688 init1: 1688 opt: 1691 Z-score: 1432.7 bits: 274.7 E(85289): 4.6e-73
Smith-Waterman score: 2988; 89.0% identity (89.3% similar) in 535 aa overlap (20-554:1-484)
10 20 30 40 50 60
pF1KE5 MVSAKKVPAIALSAGVSFALLRFLCLAVCLNESPGQNQKEEKLCTENFTRILDSLLDGYD
.:. : :::::::::::::::::::::::::::::::
NP_001 MLQRWFLPRSLNESPGQNQKEEKLCTENFTRILDSLLDGYD
10 20 30 40
70 80 90 100 110 120
pF1KE5 NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE5 NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE5 MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE5 GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
: ::::::::
NP_001 G---------------------------------------------------ITTVLTMT
230
310 320 330 340 350 360
pF1KE5 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKPPQ
240 250 260 270 280 290
370 380 390 400 410 420
pF1KE5 EVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTVVQES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTVVQES
300 310 320 330 340 350
430 440 450 460 470 480
pF1KE5 SKGTPRSYLASSPNPFSRANAAETISAARALPSASPTSIRTGYMPRKASVGSASTRHVFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKGTPRSYLASSPNPFSRANAAETISAARALPSASPTSIRTGYMPRKASVGSASTRHVFG
360 370 380 390 400 410
490 500 510 520 530 540
pF1KE5 SRLQRIKTTVNTIGATGKLSATPPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRLQRIKTTVNTIGATGKLSATPPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVV
420 430 440 450 460 470
550
pF1KE5 YLSKDTMEKSESLM
::::::::::::::
NP_001 YLSKDTMEKSESLM
480
>>NP_000799 (OMIM: 305660) gamma-aminobutyric acid recep (492 aa)
initn: 1778 init1: 1599 opt: 1653 Z-score: 1400.6 bits: 268.8 E(85289): 2.8e-71
Smith-Waterman score: 1663; 62.9% identity (84.7% similar) in 399 aa overlap (48-445:67-455)
20 30 40 50 60 70
pF1KE5 FALLRFLCLAVCLNESPGQNQKEEKLCTENFTRILDSLLDGYDNRLRPGFGGPVTEVKTD
:::::: ::::::::::::.: :::::::
NP_000 PGDFVKQDIGGLSPKHAPDIPDDSTDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTD
40 50 60 70 80 90
80 90 100 110 120 130
pF1KE5 IYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNG
:::::::::::..::::.:::::::: :.:::.:::..:: :::....:.:::::::.::
NP_000 IYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNG
100 110 120 130 140 150
140 150 160 170 180 190
pF1KE5 KKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPK
::::.::::.::::.:.. :::.:::::::: :::::.: ::::: ::::::::::::
NP_000 KKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTT
160 170 180 190 200 210
200 210 220 230 240 250
pF1KE5 SEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMG
.:..:.:: : .::::: ...: : ::::.:..:..: :.: ::::.:::..:::.::.:
NP_000 AEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIG
220 230 240 250 260 270
260 270 280 290 300 310
pF1KE5 YFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYAT
::.::::.::::::::::::::.:.::::::::::.::::::::::::::.:::::.:::
NP_000 YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYAT
280 290 300 310 320 330
320 330 340 350 360 370
pF1KE5 AMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKPPQEVPAAPVQREKHPEAPL
:::::::::.:::::::::::.::::: ::. . ..:: : ...: : ::
NP_000 AMDWFIAVCYAFVFSALIEFATVNYFT-------KRSWAWEGKKVPEALEMKKKTPAAPA
340 350 360 370 380
380 390 400 410 420 430
pF1KE5 QNTNANLNMRKRTNAL-VHSESDVGNRTEVGNHSSKSSTVVQESSKGTPRSYLASSPNPF
..:....:. : . . .... .. .. . :..:. .. : :.: :. .::.
NP_000 KKTSTTFNIVGTTYPINLAKDTEFSTISKGAAPSASSTPTIIASPKAT---YVQDSPTET
390 400 410 420 430 440
440 450 460 470 480 490
pF1KE5 SRANAAETISAARALPSASPTSIRTGYMPRKASVGSASTRHVFGSRLQRIKTTVNTIGAT
. :.. .
NP_000 KTYNSVSKVDKISRIIFPVLFAIFNLVYWATYVNRESAIKGMIRKQ
450 460 470 480 490
>>NP_001121116 (OMIM: 137160,611136,615744) gamma-aminob (456 aa)
initn: 1709 init1: 1584 opt: 1611 Z-score: 1365.8 bits: 262.2 E(85289): 2.4e-69
Smith-Waterman score: 1611; 66.6% identity (84.8% similar) in 368 aa overlap (13-376:4-370)
10 20 30 40 50
pF1KE5 MVSAKKVPAIALSAGVSFALLRF-LCLAVCLNESPGQN--QKEEKLCTENFTRILDSLLD
: :.: : . : :.. ..: :: : : : : :::::: :::
NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLD
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEIL
:::::::::.: ::::::::.::::::::: .::::.::::::.: :.:::. ::. .:
NP_001 GYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 RLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLV
::::.:..:.:::::::.::::::.:::: ::::.:: ..::.:::::::. :::::.:
NP_001 RLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 DFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIK
:::::.:::::::::::: ..:..: ::. : .:: : ...: : ::::.::::.: ..
NP_001 DFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE5 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL
: ::::.:::..:::.::.:::.::::.::::::::::::::.:.::::::::::.::::
NP_001 SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE5 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQME-KAKRKTS
::::::::::.:::::.::::::::::::.:::::::::::.:::::. . .: .
NP_001 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVP
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE5 KPPQEVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTV
. :..: :. .... ::
NP_001 EKPKKVKD-PLIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPK
360 370 380 390 400 410
>>NP_001121115 (OMIM: 137160,611136,615744) gamma-aminob (456 aa)
initn: 1709 init1: 1584 opt: 1611 Z-score: 1365.8 bits: 262.2 E(85289): 2.4e-69
Smith-Waterman score: 1611; 66.6% identity (84.8% similar) in 368 aa overlap (13-376:4-370)
10 20 30 40 50
pF1KE5 MVSAKKVPAIALSAGVSFALLRF-LCLAVCLNESPGQN--QKEEKLCTENFTRILDSLLD
: :.: : . : :.. ..: :: : : : : :::::: :::
NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLD
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEIL
:::::::::.: ::::::::.::::::::: .::::.::::::.: :.:::. ::. .:
NP_001 GYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 RLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLV
::::.:..:.:::::::.::::::.:::: ::::.:: ..::.:::::::. :::::.:
NP_001 RLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 DFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIK
:::::.:::::::::::: ..:..: ::. : .:: : ...: : ::::.::::.: ..
NP_001 DFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE5 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL
: ::::.:::..:::.::.:::.::::.::::::::::::::.:.::::::::::.::::
NP_001 SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE5 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQME-KAKRKTS
::::::::::.:::::.::::::::::::.:::::::::::.:::::. . .: .
NP_001 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVP
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE5 KPPQEVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTV
. :..: :. .... ::
NP_001 EKPKKVKD-PLIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPK
360 370 380 390 400 410
>>NP_001121120 (OMIM: 137160,611136,615744) gamma-aminob (456 aa)
initn: 1709 init1: 1584 opt: 1611 Z-score: 1365.8 bits: 262.2 E(85289): 2.4e-69
Smith-Waterman score: 1611; 66.6% identity (84.8% similar) in 368 aa overlap (13-376:4-370)
10 20 30 40 50
pF1KE5 MVSAKKVPAIALSAGVSFALLRF-LCLAVCLNESPGQN--QKEEKLCTENFTRILDSLLD
: :.: : . : :.. ..: :: : : : : :::::: :::
NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLD
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEIL
:::::::::.: ::::::::.::::::::: .::::.::::::.: :.:::. ::. .:
NP_001 GYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 RLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLV
::::.:..:.:::::::.::::::.:::: ::::.:: ..::.:::::::. :::::.:
NP_001 RLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 DFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIK
:::::.:::::::::::: ..:..: ::. : .:: : ...: : ::::.::::.: ..
NP_001 DFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE5 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL
: ::::.:::..:::.::.:::.::::.::::::::::::::.:.::::::::::.::::
NP_001 SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE5 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQME-KAKRKTS
::::::::::.:::::.::::::::::::.:::::::::::.:::::. . .: .
NP_001 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVP
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE5 KPPQEVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTV
. :..: :. .... ::
NP_001 EKPKKVKD-PLIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPK
360 370 380 390 400 410
>>NP_001121117 (OMIM: 137160,611136,615744) gamma-aminob (456 aa)
initn: 1709 init1: 1584 opt: 1611 Z-score: 1365.8 bits: 262.2 E(85289): 2.4e-69
Smith-Waterman score: 1611; 66.6% identity (84.8% similar) in 368 aa overlap (13-376:4-370)
10 20 30 40 50
pF1KE5 MVSAKKVPAIALSAGVSFALLRF-LCLAVCLNESPGQN--QKEEKLCTENFTRILDSLLD
: :.: : . : :.. ..: :: : : : : :::::: :::
NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLD
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEIL
:::::::::.: ::::::::.::::::::: .::::.::::::.: :.:::. ::. .:
NP_001 GYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 RLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLV
::::.:..:.:::::::.::::::.:::: ::::.:: ..::.:::::::. :::::.:
NP_001 RLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 DFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIK
:::::.:::::::::::: ..:..: ::. : .:: : ...: : ::::.::::.: ..
NP_001 DFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE5 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL
: ::::.:::..:::.::.:::.::::.::::::::::::::.:.::::::::::.::::
NP_001 SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE5 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQME-KAKRKTS
::::::::::.:::::.::::::::::::.:::::::::::.:::::. . .: .
NP_001 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVP
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE5 KPPQEVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTV
. :..: :. .... ::
NP_001 EKPKKVKD-PLIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPK
360 370 380 390 400 410
>>NP_000797 (OMIM: 137160,611136,615744) gamma-aminobuty (456 aa)
initn: 1709 init1: 1584 opt: 1611 Z-score: 1365.8 bits: 262.2 E(85289): 2.4e-69
Smith-Waterman score: 1611; 66.6% identity (84.8% similar) in 368 aa overlap (13-376:4-370)
10 20 30 40 50
pF1KE5 MVSAKKVPAIALSAGVSFALLRF-LCLAVCLNESPGQN--QKEEKLCTENFTRILDSLLD
: :.: : . : :.. ..: :: : : : : :::::: :::
NP_000 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLD
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEIL
:::::::::.: ::::::::.::::::::: .::::.::::::.: :.:::. ::. .:
NP_000 GYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 RLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLV
::::.:..:.:::::::.::::::.:::: ::::.:: ..::.:::::::. :::::.:
NP_000 RLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 DFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIK
:::::.:::::::::::: ..:..: ::. : .:: : ...: : ::::.::::.: ..
NP_000 DFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE5 SITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL
: ::::.:::..:::.::.:::.::::.::::::::::::::.:.::::::::::.::::
NP_000 SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE5 TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQME-KAKRKTS
::::::::::.:::::.::::::::::::.:::::::::::.:::::. . .: .
NP_000 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVP
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE5 KPPQEVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTV
. :..: :. .... ::
NP_000 EKPKKVKD-PLIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPK
360 370 380 390 400 410
554 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:41:09 2016 done: Tue Nov 8 04:41:10 2016
Total Scan time: 10.950 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]