Result of FASTA (omim) for
pFN21AE5008
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5008, 335 aa
1>>>pF1KE5008 335 - 335 aa - 335 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3321+/-0.000439; mu= -5.2984+/- 0.027
mean_var=344.4498+/-69.751, 0's: 0 Z-trim(120.4): 38 B-trim: 295 in 1/58
Lambda= 0.069105
statistics sampled from 35547 (35587) to 35547 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.417), width: 16
Scan time: 6.360
The best scores are: opt bits E(85289)
NP_060138 (OMIM: 605013,609449,614019) nuclear dis ( 335) 2144 227.2 4e-59
NP_001137451 (OMIM: 605013,609449,614019) nuclear ( 335) 2144 227.2 4e-59
XP_016878838 (OMIM: 605013,609449,614019) PREDICTE ( 346) 2023 215.1 1.7e-55
XP_016878845 (OMIM: 605013,609449,614019) PREDICTE ( 346) 2023 215.1 1.7e-55
XP_016878842 (OMIM: 605013,609449,614019) PREDICTE ( 319) 2015 214.3 2.9e-55
XP_005255453 (OMIM: 605013,609449,614019) PREDICTE ( 347) 2015 214.3 3e-55
XP_006720963 (OMIM: 605013,609449,614019) PREDICTE ( 347) 2015 214.3 3e-55
XP_011520855 (OMIM: 605013,609449,614019) PREDICTE ( 347) 2015 214.3 3e-55
XP_006720960 (OMIM: 605013,609449,614019) PREDICTE ( 379) 2015 214.4 3.2e-55
XP_016878839 (OMIM: 605013,609449,614019) PREDICTE ( 346) 1997 212.5 1e-54
XP_016878844 (OMIM: 605013,609449,614019) PREDICTE ( 301) 1706 183.4 5.1e-46
XP_016878840 (OMIM: 605013,609449,614019) PREDICTE ( 339) 1682 181.1 2.9e-45
XP_016878841 (OMIM: 605013,609449,614019) PREDICTE ( 339) 1682 181.1 2.9e-45
XP_016878843 (OMIM: 605013,609449,614019) PREDICTE ( 319) 1677 180.6 4e-45
XP_016878846 (OMIM: 605013,609449,614019) PREDICTE ( 215) 1185 131.4 1.7e-30
XP_016880676 (OMIM: 607538) PREDICTED: nuclear dis ( 328) 1133 126.4 8.6e-29
NP_001020750 (OMIM: 607538) nuclear distribution p ( 328) 1133 126.4 8.6e-29
XP_016880675 (OMIM: 607538) PREDICTED: nuclear dis ( 341) 1133 126.4 8.8e-29
XP_016880674 (OMIM: 607538) PREDICTED: nuclear dis ( 345) 1133 126.4 8.9e-29
NP_110435 (OMIM: 607538) nuclear distribution prot ( 345) 1133 126.4 8.9e-29
XP_016880673 (OMIM: 607538) PREDICTED: nuclear dis ( 358) 1133 126.4 9.2e-29
XP_016880672 (OMIM: 607538) PREDICTED: nuclear dis ( 390) 1133 126.4 9.7e-29
NP_001317058 (OMIM: 607538) nuclear distribution p ( 269) 1046 117.6 3e-26
XP_016880677 (OMIM: 607538) PREDICTED: nuclear dis ( 282) 1046 117.6 3.2e-26
>>NP_060138 (OMIM: 605013,609449,614019) nuclear distrib (335 aa)
initn: 2144 init1: 2144 opt: 2144 Z-score: 1182.5 bits: 227.2 E(85289): 4e-59
Smith-Waterman score: 2144; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:1-335)
10 20 30 40 50 60
pF1KE5 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
250 260 270 280 290 300
310 320 330
pF1KE5 GERRPSSTSVPLGDKGLDTSCRWLSKSTTRSSSSC
:::::::::::::::::::::::::::::::::::
NP_060 GERRPSSTSVPLGDKGLDTSCRWLSKSTTRSSSSC
310 320 330
>>NP_001137451 (OMIM: 605013,609449,614019) nuclear dist (335 aa)
initn: 2144 init1: 2144 opt: 2144 Z-score: 1182.5 bits: 227.2 E(85289): 4e-59
Smith-Waterman score: 2144; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:1-335)
10 20 30 40 50 60
pF1KE5 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
250 260 270 280 290 300
310 320 330
pF1KE5 GERRPSSTSVPLGDKGLDTSCRWLSKSTTRSSSSC
:::::::::::::::::::::::::::::::::::
NP_001 GERRPSSTSVPLGDKGLDTSCRWLSKSTTRSSSSC
310 320 330
>>XP_016878838 (OMIM: 605013,609449,614019) PREDICTED: n (346 aa)
initn: 2023 init1: 2023 opt: 2023 Z-score: 1117.1 bits: 215.1 E(85289): 1.7e-55
Smith-Waterman score: 2023; 96.1% identity (97.3% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KE5 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
250 260 270 280 290 300
310 320 330
pF1KE5 GERRPSSTSVPLGDKGLDTSCRWLSKSTTRSSSSC
::::::::::::::::: .. . . :::
XP_016 GERRPSSTSVPLGDKGLGKRLEFGKPPSHMSSSPLPSAQGVVKMLL
310 320 330 340
>>XP_016878845 (OMIM: 605013,609449,614019) PREDICTED: n (346 aa)
initn: 2023 init1: 2023 opt: 2023 Z-score: 1117.1 bits: 215.1 E(85289): 1.7e-55
Smith-Waterman score: 2023; 96.1% identity (97.3% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KE5 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
250 260 270 280 290 300
310 320 330
pF1KE5 GERRPSSTSVPLGDKGLDTSCRWLSKSTTRSSSSC
::::::::::::::::: .. . . :::
XP_016 GERRPSSTSVPLGDKGLGKRLEFGKPPSHMSSSPLPSAQGVVKMLL
310 320 330 340
>>XP_016878842 (OMIM: 605013,609449,614019) PREDICTED: n (319 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1113.3 bits: 214.3 E(85289): 2.9e-55
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KE5 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
250 260 270 280 290 300
310 320 330
pF1KE5 GERRPSSTSVPLGDKGLDTSCRWLSKSTTRSSSSC
::::::::::::::::
XP_016 GERRPSSTSVPLGDKGREN
310
>>XP_005255453 (OMIM: 605013,609449,614019) PREDICTED: n (347 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1112.8 bits: 214.3 E(85289): 3e-55
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KE5 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
250 260 270 280 290 300
310 320 330
pF1KE5 GERRPSSTSVPLGDKGLDTSCRWLSKSTTRSSSSC
::::::::::::::::
XP_005 GERRPSSTSVPLGDKGSVPSNKPLAGGENPPAPGKRHSPPAHSHVSF
310 320 330 340
>>XP_006720963 (OMIM: 605013,609449,614019) PREDICTED: n (347 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1112.8 bits: 214.3 E(85289): 3e-55
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KE5 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
250 260 270 280 290 300
310 320 330
pF1KE5 GERRPSSTSVPLGDKGLDTSCRWLSKSTTRSSSSC
::::::::::::::::
XP_006 GERRPSSTSVPLGDKGSVPSNKPLAGGENPPAPGKRHSPPAHSHVSF
310 320 330 340
>>XP_011520855 (OMIM: 605013,609449,614019) PREDICTED: n (347 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1112.8 bits: 214.3 E(85289): 3e-55
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KE5 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
250 260 270 280 290 300
310 320 330
pF1KE5 GERRPSSTSVPLGDKGLDTSCRWLSKSTTRSSSSC
::::::::::::::::
XP_011 GERRPSSTSVPLGDKGSVPSNKPLAGGENPPAPGKRHSPPAHSHVSF
310 320 330 340
>>XP_006720960 (OMIM: 605013,609449,614019) PREDICTED: n (379 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1112.3 bits: 214.4 E(85289): 3.2e-55
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 316 aa overlap (1-316:33-348)
10 20 30
pF1KE5 MEDSGKTFSSEEEEANYWKDLAMTYKQRAE
::::::::::::::::::::::::::::::
XP_006 TAFPVTGWASRKEILRHHATRRVISSPVFTMEDSGKTFSSEEEEANYWKDLAMTYKQRAE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE5 NTQEELREFQEGSREYEAELETQLQQIETRNRDLLSENNRLRMELETIKEKFEVQHSEGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NTQEELREFQEGSREYEAELETQLQQIETRNRDLLSENNRLRMELETIKEKFEVQHSEGY
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE5 RQISALEDDLAQTKAIKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RQISALEDDLAQTKAIKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNA
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE5 FLESELDEKENLLESVQRLKDEARDLRQELAVQQKQEKPRTPMPSSVEAERTDTAVQATG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FLESELDEKENLLESVQRLKDEARDLRQELAVQQKQEKPRTPMPSSVEAERTDTAVQATG
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE5 SVPSTPIAHRGPSSSLNTPGSFRRGLDDSTGGTPLTPAARISALNIVGDLLRKVGALESK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SVPSTPIAHRGPSSSLNTPGSFRRGLDDSTGGTPLTPAARISALNIVGDLLRKVGALESK
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE5 LASCRNLVYDQSPNRTGGPASGRSSKNRDGGERRPSSTSVPLGDKGLDTSCRWLSKSTTR
::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LASCRNLVYDQSPNRTGGPASGRSSKNRDGGERRPSSTSVPLGDKGSVPSNKPLAGGENP
310 320 330 340 350 360
pF1KE5 SSSSC
XP_006 PAPGKRHSPPAHSHVSF
370
>>XP_016878839 (OMIM: 605013,609449,614019) PREDICTED: n (346 aa)
initn: 1511 init1: 1511 opt: 1997 Z-score: 1103.1 bits: 212.5 E(85289): 1e-54
Smith-Waterman score: 1997; 99.7% identity (99.7% similar) in 316 aa overlap (1-316:1-315)
10 20 30 40 50 60
pF1KE5 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_016 NRDLLSENNRLRMELETIK-KFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
70 80 90 100 110
130 140 150 160 170 180
pF1KE5 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE5 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE5 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
240 250 260 270 280 290
310 320 330
pF1KE5 GERRPSSTSVPLGDKGLDTSCRWLSKSTTRSSSSC
::::::::::::::::
XP_016 GERRPSSTSVPLGDKGSVPSNKPLAGGENPPAPGKRHSPPAHSHVSF
300 310 320 330 340
335 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:06:47 2016 done: Tue Nov 8 04:06:48 2016
Total Scan time: 6.360 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]