Result of FASTA (ccds) for
pFN21AE4571
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4571, 737 aa
1>>>pF1KE4571 737 - 737 aa - 737 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8081+/-0.00102; mu= 16.6186+/- 0.061
mean_var=63.4657+/-12.724, 0's: 0 Z-trim(103.3): 23 B-trim: 114 in 1/48
Lambda= 0.160992
statistics sampled from 7337 (7343) to 7337 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.585), E-opt: 0.2 (0.226), width: 16
Scan time: 3.880
The best scores are: opt bits E(32554)
CCDS8141.1 DPP3 gene_id:10072|Hs108|chr11 ( 737) 4858 1137.6 0
CCDS58147.1 DPP3 gene_id:10072|Hs108|chr11 ( 707) 4072 955.0 0
>>CCDS8141.1 DPP3 gene_id:10072|Hs108|chr11 (737 aa)
initn: 4858 init1: 4858 opt: 4858 Z-score: 6090.6 bits: 1137.6 E(32554): 0
Smith-Waterman score: 4858; 99.9% identity (100.0% similar) in 737 aa overlap (1-737:1-737)
10 20 30 40 50 60
pF1KE4 MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 ALLSRLFRAQDPDQLHQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
CCDS81 ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE4 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT
670 680 690 700 710 720
730
pF1KE4 ADARFWKGPSEAPSGQA
:::::::::::::::::
CCDS81 ADARFWKGPSEAPSGQA
730
>>CCDS58147.1 DPP3 gene_id:10072|Hs108|chr11 (707 aa)
initn: 4072 init1: 4072 opt: 4072 Z-score: 5104.3 bits: 955.0 E(32554): 0
Smith-Waterman score: 4587; 95.8% identity (95.9% similar) in 737 aa overlap (1-737:1-707)
10 20 30 40 50 60
pF1KE4 MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 ALLSRLFRAQDPDQLHQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK
:::::::::::::::.::::::::::::::
CCDS58 ALLSRLFRAQDPDQLRQHALAEGLTEEEYQ------------------------------
70 80 90
130 140 150 160 170 180
pF1KE4 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE4 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE4 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE4 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE4 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE4 REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE4 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE4 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE4 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD
580 590 600 610 620 630
670 680 690 700 710 720
pF1KE4 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT
640 650 660 670 680 690
730
pF1KE4 ADARFWKGPSEAPSGQA
:::::::::::::::::
CCDS58 ADARFWKGPSEAPSGQA
700
737 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 23:50:55 2016 done: Sat Nov 5 23:50:56 2016
Total Scan time: 3.880 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]