FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE4557, 679 aa
  1>>>pF1KE4557 679 - 679 aa - 679 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4210+/-0.00113; mu= 19.4954+/- 0.068
 mean_var=75.2533+/-14.991, 0's: 0 Z-trim(102.5): 25  B-trim: 0 in 0/47
 Lambda= 0.147847
 statistics sampled from 6984 (6987) to 6984 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.561), E-opt: 0.2 (0.215), width:  16
 Scan time:  3.480

The best scores are:                                      opt bits E(32554)
CCDS2099.1 SLC20A1 gene_id:6574|Hs108|chr2         ( 679) 4456 960.6       0
CCDS6132.1 SLC20A2 gene_id:6575|Hs108|chr8         ( 652) 1238 274.2 4.1e-73


>>CCDS2099.1 SLC20A1 gene_id:6574|Hs108|chr2              (679 aa)
 initn: 4456 init1: 4456 opt: 4456  Z-score: 5135.5  bits: 960.6 E(32554):    0
Smith-Waterman score: 4456; 100.0% identity (100.0% similar) in 679 aa overlap (1-679:1-679)

               10        20        30        40        50        60
pF1KE4 MATLITSTTAATAASGPLVDYLWMLILGFIIAFVLAFSVGANDVANSFGTAVGSGVVTLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 MATLITSTTAATAASGPLVDYLWMLILGFIIAFVLAFSVGANDVANSFGTAVGSGVVTLK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 QACILASIFETVGSVLLGAKVSETIRKGLIDVEMYNSTQGLLMAGSVSAMFGSAVWQLVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 QACILASIFETVGSVLLGAKVSETIRKGLIDVEMYNSTQGLLMAGSVSAMFGSAVWQLVA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 SFLKLPISGTHCIVGATIGFSLVAKGQEGVKWSELIKIVMSWFVSPLLSGIMSGILFFLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 SFLKLPISGTHCIVGATIGFSLVAKGQEGVKWSELIKIVMSWFVSPLLSGIMSGILFFLV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 RAFILHKADPVPNGLRALPVFYACTVGINLFSIMYTGAPLLGFDKLPLWGTILISVGCAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 RAFILHKADPVPNGLRALPVFYACTVGINLFSIMYTGAPLLGFDKLPLWGTILISVGCAV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 FCALIVWFFVCPRMKRKIEREIKCSPSESPLMEKKNSLKEDHEETKLSVGDIENKHPVSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 FCALIVWFFVCPRMKRKIEREIKCSPSESPLMEKKNSLKEDHEETKLSVGDIENKHPVSE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 VGPATVPLQAVVEERTVSFKLGDLEEAPERERLPSVDLKEETSIDSTVNGAVQLPNGNLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 VGPATVPLQAVVEERTVSFKLGDLEEAPERERLPSVDLKEETSIDSTVNGAVQLPNGNLV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 QFSQAVSNQINSSGHYQYHTVHKDSGLYKELLHKLHLAKVGDCMGDSGDKPLRRNNSYTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 QFSQAVSNQINSSGHYQYHTVHKDSGLYKELLHKLHLAKVGDCMGDSGDKPLRRNNSYTS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE4 YTMAICGMPLDSFRAKEGEQKGEEMEKLTWPNADSKKRIRMDSYTSYCNAVSDLHSASEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 YTMAICGMPLDSFRAKEGEQKGEEMEKLTWPNADSKKRIRMDSYTSYCNAVSDLHSASEI
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE4 DMSVKAEMGLGDRKGSNGSLEEWYDQDKPEVSLLFQFLQILTACFGSFAHGGNDVSNAIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 DMSVKAEMGLGDRKGSNGSLEEWYDQDKPEVSLLFQFLQILTACFGSFAHGGNDVSNAIG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE4 PLVALYLVYDTGDVSSKVATPIWLLLYGGVGICVGLWVWGRRVIQTMGKDLTPITPSSGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 PLVALYLVYDTGDVSSKVATPIWLLLYGGVGICVGLWVWGRRVIQTMGKDLTPITPSSGF
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE4 SIELASALTVVIASNIGLPISTTHCKVGSVVSVGWLRSKKAVDWRLFRNIFMAWFVTVPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 SIELASALTVVIASNIGLPISTTHCKVGSVVSVGWLRSKKAVDWRLFRNIFMAWFVTVPI
              610       620       630       640       650       660

              670         
pF1KE4 SGVISAAIMAIFRYVILRM
       :::::::::::::::::::
CCDS20 SGVISAAIMAIFRYVILRM
              670         

>>CCDS6132.1 SLC20A2 gene_id:6575|Hs108|chr8              (652 aa)
 initn: 2430 init1: 1096 opt: 1238  Z-score: 1426.1  bits: 274.2 E(32554): 4.1e-73
Smith-Waterman score: 2521; 60.7% identity (80.1% similar) in 672 aa overlap (20-677:5-649)

               10        20        30        40        50        60
pF1KE4 MATLITSTTAATAASGPLVDYLWMLILGFIIAFVLAFSVGANDVANSFGTAVGSGVVTLK
                          .::::.::::::::.:::::::::::::::::::::::::.
CCDS61                MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLR
                              10        20        30        40     

               70        80        90       100       110       120
pF1KE4 QACILASIFETVGSVLLGAKVSETIRKGLIDVEMYNSTQGLLMAGSVSAMFGSAVWQLVA
       :::::::::::.:::::::::.::::::.:::..:: :   :::: :::: :::::::.:
CCDS61 QACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNETVETLMAGEVSAMVGSAVWQLIA
          50        60        70        80        90       100     

              130       140       150       160       170       180
pF1KE4 SFLKLPISGTHCIVGATIGFSLVAKGQEGVKWSELIKIVMSWFVSPLLSGIMSGILFFLV
       :::.:::::::::::.:::::::: : .::.: ::.::: :::.::::::.:::.:: :.
CCDS61 SFLRLPISGTHCIVGSTIGFSLVAIGTKGVQWMELVKIVASWFISPLLSGFMSGLLFVLI
         110       120       130       140       150       160     

              190       200       210       220       230       240
pF1KE4 RAFILHKADPVPNGLRALPVFYACTVGINLFSIMYTGAPLLGFDKLPLWGTILISVGCAV
       : :::.: ::::::::::::::: :..::.:::::::::.::.  ::.:.  ::: : :.
CCDS61 RIFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVLGL-VLPMWAIALISFGVAL
         170       180       190       200        210       220    

              250       260       270       280       290       300
pF1KE4 FCALIVWFFVCPRMKRKIEREIKCSPSESPLMEKKNSLKEDHEETKLSVGDIENKHPVSE
       . :..::.:::: :.:::  .          ..:...:..  .:.  .: . :.  :: .
CCDS61 LFAFFVWLFVCPWMRRKITGK----------LQKEGALSRVSDESLSKVQEAES--PVFK
          230       240                 250       260         270  

                     310       320       330       340       350   
pF1KE4 VGP-------ATVPLQAVVEERTVSFKLGDLEEAPERERLPSVDLKEETSIDSTVNGAVQ
         :       .:.:: ... :      ::   :.      : .   .  :.   ..:.:.
CCDS61 ELPGAKANDDSTIPLTGAAGET-----LGT-SEGTSAGSHPRAAYGRALSM---THGSVK
            280       290             300       310          320   

           360       370       380       390       400         410 
pF1KE4 LPNGNLVQFSQAVSNQINSSGHYQYHTVHKDSGLYKELLHKLHLAKVGDC--MGDSGDKP
        : .: . :.   ...  :.::  ::::::::::::.::::.:. .  .     .:. . 
CCDS61 SPISNGT-FG--FDGHTRSDGHV-YHTVHKDSGLYKDLLHKIHIDRGPEEKPAQESNYRL
           330          340        350       360       370         

             420       430        440       450        460         
pF1KE4 LRRNNSYTSYTMAICGMPLD-SFRAKEGEQKGEEMEKLTWPNAD-SKKRIRMDSYTSYCN
       :::::::: :: ::::.:.  .::: .. .  :. :::.  ... ::::.:.:::.::::
CCDS61 LRRNNSYTCYTAAICGLPVHATFRAADS-SAPEDSEKLVGDTVSYSKKRLRYDSYSSYCN
     380       390       400        410       420       430        

     470          480       490       500       510       520      
pF1KE4 AVSDLHSASE---IDMSVKAEMGLGDRKGSNGSLEEWYDQDKPEVSLLFQFLQILTACFG
       ::.. .  .:   ..:.. .:..  :.   . . ::  ..: ::: :::.:::.::::::
CCDS61 AVAEAEIEAEEGGVEMKLASELADPDQPREDPAEEEKEEKDAPEVHLLFHFLQVLTACFG
      440       450       460       470       480       490        

        530       540       550       560       570       580      
pF1KE4 SFAHGGNDVSNAIGPLVALYLVYDTGDVSSKVATPIWLLLYGGVGICVGLWVWGRRVIQT
       :::::::::::::::::::.:.:  : :....:::.:::.:::::::.::::::::::::
CCDS61 SFAHGGNDVSNAIGPLVALWLIYKQGGVTQEAATPVWLLFYGGVGICTGLWVWGRRVIQT
      500       510       520       530       540       550        

        590       600       610       620       630       640      
pF1KE4 MGKDLTPITPSSGFSIELASALTVVIASNIGLPISTTHCKVGSVVSVGWLRSKKAVDWRL
       ::::::::::::::.::::::.:::::::::::.:::::::::::.:::.::.:::::::
CCDS61 MGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRL
      560       570       580       590       600       610        

        650       660       670          
pF1KE4 FRNIFMAWFVTVPISGVISAAIMAIFRYVILRM 
       :::::.:::::::..:..:::.::.. : ::   
CCDS61 FRNIFVAWFVTVPVAGLFSAAVMALLMYGILPYV
      620       630       640       650  




679 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 23:57:34 2016 done: Sat Nov  5 23:57:34 2016
 Total Scan time:  3.480 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]