Result of FASTA (omim) for
pFN21AE4546
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4546, 640 aa
1>>>pF1KE4546 640 - 640 aa - 640 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0937+/-0.000389; mu= 21.6474+/- 0.025
mean_var=80.4307+/-16.127, 0's: 0 Z-trim(113.0): 67 B-trim: 560 in 1/52
Lambda= 0.143009
statistics sampled from 22072 (22137) to 22072 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.623), E-opt: 0.2 (0.26), width: 16
Scan time: 10.210
The best scores are: opt bits E(85289)
NP_060570 (OMIM: 254770,607631,608815) EF-hand dom ( 640) 4298 896.9 0
NP_001165891 (OMIM: 254770,607631,608815) EF-hand ( 621) 4153 867.0 0
NP_079460 (OMIM: 300817) EF-hand domain-containing ( 749) 701 154.9 9.9e-37
XP_006724625 (OMIM: 300817) PREDICTED: EF-hand dom ( 553) 289 69.7 3.1e-11
NP_005176 (OMIM: 114184) calmodulin-like protein 3 ( 149) 170 44.7 0.00029
NP_001316852 (OMIM: 114183) calmodulin isoform 2 [ ( 113) 164 43.3 0.00056
NP_001292554 (OMIM: 114182,616249) calmodulin isof ( 113) 164 43.3 0.00056
NP_001292555 (OMIM: 114182,616249) calmodulin isof ( 113) 164 43.3 0.00056
NP_001316853 (OMIM: 114183) calmodulin isoform 2 [ ( 113) 164 43.3 0.00056
NP_001316855 (OMIM: 114183) calmodulin isoform 2 [ ( 113) 164 43.3 0.00056
NP_001316850 (OMIM: 114183) calmodulin isoform 2 [ ( 113) 164 43.3 0.00056
NP_001316854 (OMIM: 114183) calmodulin isoform 2 [ ( 113) 164 43.3 0.00056
NP_001734 (OMIM: 114182,616249) calmodulin isoform ( 149) 164 43.4 0.00069
NP_008819 (OMIM: 114180,614916,616247) calmodulin ( 149) 164 43.4 0.00069
NP_001316851 (OMIM: 114183) calmodulin isoform 1 [ ( 149) 164 43.4 0.00069
NP_005175 (OMIM: 114183) calmodulin isoform 1 [Hom ( 149) 164 43.4 0.00069
XP_006720321 (OMIM: 114180,614916,616247) PREDICTE ( 150) 164 43.4 0.00069
NP_001292553 (OMIM: 114182,616249) calmodulin isof ( 197) 164 43.5 0.00084
>>NP_060570 (OMIM: 254770,607631,608815) EF-hand domain- (640 aa)
initn: 4298 init1: 4298 opt: 4298 Z-score: 4792.1 bits: 896.9 E(85289): 0
Smith-Waterman score: 4298; 99.7% identity (99.8% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KE4 MVSNPVHGLPFLPGTSFKDSTKTAFHRSQTLSYRNGYAIVRRPTVGIGGDRLQFNQLSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MVSNPVHGLPFLPGTSFKDSTKTAFHRSQTLSYRNGYAIVRRPTVGIGGDRLQFNQLSQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 ELDELASKAPVLTYGQPKQAPPADFIPAHVAFDKKVLKFDAYFQEDVPMSTEEQYRIRQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ELDELASKAPVLTYGQPKQAPPADFIPAHVAFDKKVLKFDAYFQEDVPMSTEEQYRIRQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 NIYYYLEDDSMSVIEPVVENSGILQGKLIKRQRLAKNDRGDHYHWKDLNRGINITIYGKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 NIYYYLEDDSMSVIEPVVENSGILQGKLIKRQRLAKNDRGDHYHWKDLNRGINITIYGKT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 FRVVDCDQFTQVFLESQGIELNPPEKMALDPYTELRKQPLRKYVTPSDFDQLKQFLTFDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 FRVVDCDQFTQVFLESQGIELNPPEKMALDPYTELRKQPLRKYVTPSDFDQLKQFLTFDK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 QVLRFYAIWDDTDSMYGECRTYIIHYYLMDDTVEIREVHERNDGIDPFPLLMNRQRVPKV
:::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
NP_060 QVLRFYAIWDDTDSMYGECRTYIIHYYLMDDTVEIREVHERNDGRDPFPLLMNRQRVPKV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 LVENAKNFPQCVLEISDQEVLEWYTAKDFIVGKSLTILGRTFFIYDCDPFTRRYYKEKFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LVENAKNFPQCVLEISDQEVLEWYTAKDFIVGKSLTILGRTFFIYDCDPFTRRYYKEKFG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 ITDLPRIDVSKREPPPVKQELPPYNGFGLVEDSAQNCFALIPKAPKKDVIKMLVNDNKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ITDLPRIDVSKREPPPVKQELPPYNGFGLVEDSAQNCFALIPKAPKKDVIKMLVNDNKVL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 RYLAVLESPIPEDKDRRFVFSYFLATDMISIFEPPVRNSGIIGGKYLGRTKVVKPYSTVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 RYLAVLESPIPEDKDRRFVFSYFLATDMISIFEPPVRNSGIIGGKYLGRTKVVKPYSTVD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 NPVYYGPSDFFIGAVIEVFGHRFIILDTDEYVLKYMESNAAQYSPEALASIQNHVRKREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 NPVYYGPSDFFIGAVIEVFGHRFIILDTDEYVLKYMESNAAQYSPEALASIQNHVRKREA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 PAPEAESKQTEKDPGVQELEALIDTIQKQLKDHSCKDNIREAFQIYDKEASGYVDRDMFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PAPEAESKQTEKDPGVQELEALIDTIQKQLKDHSCKDNIREAFQIYDKEASGYVDRDMFF
550 560 570 580 590 600
610 620 630 640
pF1KE4 KICESLNVPVDDSLVKELLRMCSHGEGKINYYNFVRAFSN
::::::::::::::::::.:::::::::::::::::::::
NP_060 KICESLNVPVDDSLVKELIRMCSHGEGKINYYNFVRAFSN
610 620 630 640
>>NP_001165891 (OMIM: 254770,607631,608815) EF-hand doma (621 aa)
initn: 4153 init1: 4153 opt: 4153 Z-score: 4630.6 bits: 867.0 E(85289): 0
Smith-Waterman score: 4153; 99.7% identity (99.8% similar) in 619 aa overlap (22-640:3-621)
10 20 30 40 50 60
pF1KE4 MVSNPVHGLPFLPGTSFKDSTKTAFHRSQTLSYRNGYAIVRRPTVGIGGDRLQFNQLSQA
:::::::::::::::::::::::::::::::::::::::
NP_001 MLKTAFHRSQTLSYRNGYAIVRRPTVGIGGDRLQFNQLSQA
10 20 30 40
70 80 90 100 110 120
pF1KE4 ELDELASKAPVLTYGQPKQAPPADFIPAHVAFDKKVLKFDAYFQEDVPMSTEEQYRIRQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELDELASKAPVLTYGQPKQAPPADFIPAHVAFDKKVLKFDAYFQEDVPMSTEEQYRIRQV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 NIYYYLEDDSMSVIEPVVENSGILQGKLIKRQRLAKNDRGDHYHWKDLNRGINITIYGKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NIYYYLEDDSMSVIEPVVENSGILQGKLIKRQRLAKNDRGDHYHWKDLNRGINITIYGKT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE4 FRVVDCDQFTQVFLESQGIELNPPEKMALDPYTELRKQPLRKYVTPSDFDQLKQFLTFDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FRVVDCDQFTQVFLESQGIELNPPEKMALDPYTELRKQPLRKYVTPSDFDQLKQFLTFDK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE4 QVLRFYAIWDDTDSMYGECRTYIIHYYLMDDTVEIREVHERNDGIDPFPLLMNRQRVPKV
:::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
NP_001 QVLRFYAIWDDTDSMYGECRTYIIHYYLMDDTVEIREVHERNDGRDPFPLLMNRQRVPKV
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE4 LVENAKNFPQCVLEISDQEVLEWYTAKDFIVGKSLTILGRTFFIYDCDPFTRRYYKEKFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVENAKNFPQCVLEISDQEVLEWYTAKDFIVGKSLTILGRTFFIYDCDPFTRRYYKEKFG
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE4 ITDLPRIDVSKREPPPVKQELPPYNGFGLVEDSAQNCFALIPKAPKKDVIKMLVNDNKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITDLPRIDVSKREPPPVKQELPPYNGFGLVEDSAQNCFALIPKAPKKDVIKMLVNDNKVL
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE4 RYLAVLESPIPEDKDRRFVFSYFLATDMISIFEPPVRNSGIIGGKYLGRTKVVKPYSTVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYLAVLESPIPEDKDRRFVFSYFLATDMISIFEPPVRNSGIIGGKYLGRTKVVKPYSTVD
410 420 430 440 450 460
490 500 510 520 530 540
pF1KE4 NPVYYGPSDFFIGAVIEVFGHRFIILDTDEYVLKYMESNAAQYSPEALASIQNHVRKREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPVYYGPSDFFIGAVIEVFGHRFIILDTDEYVLKYMESNAAQYSPEALASIQNHVRKREA
470 480 490 500 510 520
550 560 570 580 590 600
pF1KE4 PAPEAESKQTEKDPGVQELEALIDTIQKQLKDHSCKDNIREAFQIYDKEASGYVDRDMFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAPEAESKQTEKDPGVQELEALIDTIQKQLKDHSCKDNIREAFQIYDKEASGYVDRDMFF
530 540 550 560 570 580
610 620 630 640
pF1KE4 KICESLNVPVDDSLVKELLRMCSHGEGKINYYNFVRAFSN
::::::::::::::::::.:::::::::::::::::::::
NP_001 KICESLNVPVDDSLVKELIRMCSHGEGKINYYNFVRAFSN
590 600 610 620
>>NP_079460 (OMIM: 300817) EF-hand domain-containing fam (749 aa)
initn: 954 init1: 240 opt: 701 Z-score: 780.4 bits: 154.9 E(85289): 9.9e-37
Smith-Waterman score: 1195; 36.6% identity (63.6% similar) in 580 aa overlap (9-544:3-562)
10 20 30 40 50
pF1KE4 MVSNPVHGLPFLPGTSF-KDSTKTAFHRSQTLSYRNG-YAIVRRPTVGIGGDRLQFNQLS
::.:::.:: .. : ::.:: .. :. . .: ::::. : :.
NP_079 MALPLLPGNSFNRNVGKEKFHKSQHWGFCNNVMMLVSDEKPGIGGEPL----LG
10 20 30 40 50
60 70 80 90 100 110
pF1KE4 QAELDELASKAPVLTYGQPKQAPPADFIPAHVAFDKKVLKFDAYFQEDVPMSTEEQYRIR
: .. : . :. .. .:. :::::.::.::::..:.: ... .::::
NP_079 Q----KIKPKCSIYPKGDGSD------VPSWVAFDKQVLSFDAYLEEEVLDKSQTNYRIR
60 70 80 90 100
120 130 140 150 160 170
pF1KE4 QVNIYYYLEDDSMSVIEPVVENSGILQGKLIKRQR--LAKNDRGDHYHWKDLNRGINITI
.::.: :::...: :: :.:::.::: :.:.: : :. . : .: : ....
NP_079 YYKIYFYPEDDTIQVNEPEVKNSGLLQGTSIRRHRITLPPPDEDQFYTVYHFNVGTEVVF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE4 YGKTFRVVDCDQFTQVFLESQGIELNPPEKMALDPYTELRKQ------PLRKYVTPSDFD
::.::.. ::: ::. ::.. :...::: . ::: ..:.. ::: : . .:
NP_079 YGRTFKIYDCDAFTRNFLRKIGVKVNPPVQCPEDPYMKIRREVVEHVEPLRPYES---LD
170 180 190 200 210
240 250 260 270 280 290
pF1KE4 QLKQFLTFDKQVLRFYAIWDDTDSMYGECRTYIIHYYLMDDTVEIREVHERNDGIDPFPL
::::: . ..: :. .:::. ::.:. : :.::.: :::.::.:. ...: : . .
NP_079 TLKQFLQYHGKILCFFCLWDDSVSMFGDRRELILHYFLCDDTIEIKELLPHSSGRDALKM
220 230 240 250 260 270
300 310 320
pF1KE4 LMNRQRVPK----------------VL------VENAKN---FPQCVLEISDQEVLEWYT
.. :...:: :: ..: . : . : :: :.:
NP_079 FLRRSKLPKNCPPRVYQPGQITDRAVLNSYGDFIKNQADGYLFDRYKLGKVDQ---EFYK
280 290 300 310 320 330
330 340 350 360 370 380
pF1KE4 AKDFIVGKSLTILGRTFFIYDCDPFTRRYYKEKFGITDLPRIDVSKREPPP-VKQELPPY
.:. .: .... :: ..:::: ::. ::: :.:: .. .. . ::: .....:::
NP_079 DSDLSLGVTINVWGRKVLLYDCDEFTKSYYKSKYGIENFTSVSCKPPSPPPKIERKFPPY
340 350 360 370 380 390
390 400 410 420 430
pF1KE4 NGFGLVEDSAQNCFALIPKAPKKDVIKMLVNDN-----KVLRYLAVLESPIPEDKDRRFV
:::: ::: .::. : : ... :.. .:. ..::..: : . : :: ::
NP_079 NGFGSEEDSLRNCIDLKPTPHRRNFKKFMEKDSYGSKSNILRFFAKLVTDKCVDLDRMFV
400 410 420 430 440 450
440 450 460 470 480 490
pF1KE4 FSYFLATDMISIFEPPVRNSGIIGGKYLGRTKVVKPYSTV---DNPVYYGPSDFFIGAVI
.::.:. : ::.::: ::::: :: .: :..: :: . : . : ...::...
NP_079 ISYYLGDDTISVFEPIERNSGIAGGMFLKRSRVKKPGQEVFKSELSEYIKAEELYIGVTV
460 470 480 490 500 510
500 510 520 530 540 550
pF1KE4 EVFGHRFIILDTDEYVLKYMESNAAQYSPEALASIQNHVRKREAPAPEAESKQTEKDPGV
.: :. : .:..:::.:.:::.:. .: : ......:. . :
NP_079 NVNGYLFRLLNADEYTLNYMEQNTDKYPFSNLKLALQKLKQEEGKSRELKQVFKAADSKH
520 530 540 550 560 570
560 570 580 590 600 610
pF1KE4 QELEALIDTIQKQLKDHSCKDNIREAFQIYDKEASGYVDRDMFFKICESLNVPVDDSLVK
NP_079 TNMVDYNTFRDILMSLTVGNLAEQEFVTIARHYRVPEGTCSDMDFLIALAHEKFKKNMFE
580 590 600 610 620 630
>>XP_006724625 (OMIM: 300817) PREDICTED: EF-hand domain- (553 aa)
initn: 777 init1: 234 opt: 289 Z-score: 322.8 bits: 69.7 E(85289): 3.1e-11
Smith-Waterman score: 734; 35.5% identity (62.9% similar) in 361 aa overlap (218-544:12-366)
190 200 210 220 230 240
pF1KE4 QFTQVFLESQGIELNPPEKMALDPYTELRKQPLRKYVTPSDFDQLKQFLTFDKQVLRFYA
.::: : ..: ::::: . ..: :.
XP_006 MKIRREVVEHVEPLRPY---ESLDTLKQFLQYHGKILCFFC
10 20 30
250 260 270 280 290
pF1KE4 IWDDTDSMYGECRTYIIHYYLMDDTVEIREVHERNDGIDPFPLLMNRQRVPK--------
.:::. ::.:. : :.::.: :::.::.:. ...: : . ... :...::
XP_006 LWDDSVSMFGDRRELILHYFLCDDTIEIKELLPHSSGRDALKMFLRRSKLPKNCPPRVYQ
40 50 60 70 80 90
300 310 320 330 340
pF1KE4 --------VL------VENAKN---FPQCVLEISDQEVLEWYTAKDFIVGKSLTILGRTF
:: ..: . : . : ::: .: .:. .: .... ::
XP_006 PGQITDRAVLNSYGDFIKNQADGYLFDRYKLGKVDQE---FYKDSDLSLGVTINVWGRKV
100 110 120 130 140 150
350 360 370 380 390 400
pF1KE4 FIYDCDPFTRRYYKEKFGITDLPRIDVSKREPPP-VKQELPPYNGFGLVEDSAQNCFALI
..:::: ::. ::: :.:: .. .. . ::: .....::::::: ::: .::. :
XP_006 LLYDCDEFTKSYYKSKYGIENFTSVSCKPPSPPPKIERKFPPYNGFGSEEDSLRNCIDLK
160 170 180 190 200 210
410 420 430 440 450
pF1KE4 PKAPKKDVIKMLVNDN-----KVLRYLAVLESPIPEDKDRRFVFSYFLATDMISIFEPPV
: ... :.. .:. ..::..: : . : :: ::.::.:. : ::.:::
XP_006 PTPHRRNFKKFMEKDSYGSKSNILRFFAKLVTDKCVDLDRMFVISYYLGDDTISVFEPIE
220 230 240 250 260 270
460 470 480 490 500 510
pF1KE4 RNSGIIGGKYLGRTKVVKPYSTV---DNPVYYGPSDFFIGAVIEVFGHRFIILDTDEYVL
::::: :: .: :..: :: . : . : ...::....: :. : .:..:::.:
XP_006 RNSGIAGGMFLKRSRVKKPGQEVFKSELSEYIKAEELYIGVTVNVNGYLFRLLNADEYTL
280 290 300 310 320 330
520 530 540 550 560 570
pF1KE4 KYMESNAAQYSPEALASIQNHVRKREAPAPEAESKQTEKDPGVQELEALIDTIQKQLKDH
.:::.:. .: : ......:. . :
XP_006 NYMEQNTDKYPFSNLKLALQKLKQEEGKSRELKQVFKAADSKHTNMVDYNTFRDILMSLT
340 350 360 370 380 390
580 590 600 610 620 630
pF1KE4 SCKDNIREAFQIYDKEASGYVDRDMFFKICESLNVPVDDSLVKELLRMCSHGEGKINYYN
XP_006 VGNLAEQEFVTIARHYRVPEGTCSDMDFLIALAHEKFKKNMFENFDTFIYSCVYEDREKK
400 410 420 430 440 450
>>NP_005176 (OMIM: 114184) calmodulin-like protein 3 [Ho (149 aa)
initn: 107 init1: 87 opt: 170 Z-score: 197.5 bits: 44.7 E(85289): 0.00029
Smith-Waterman score: 170; 26.7% identity (65.3% similar) in 101 aa overlap (539-638:46-146)
510 520 530 540 550 560
pF1KE4 DEYVLKYMESNAAQYSPEALASIQNHVRKREAPAPEAESKQTEKDPGVQELEALIDTIQK
:: . :. . :. .. .. . .
NP_005 AFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMAR
20 30 40 50 60 70
570 580 590 600 610 620
pF1KE4 QLKDHSCKDNIREAFQIYDKEASGYVDRDMFFKICESLNVPVDDSLVKELLRMC-SHGEG
..:: . ...:::::...::...:.:. . .. :. ..: : :..: . :.:
NP_005 KMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDG
80 90 100 110 120 130
630 640
pF1KE4 KINYYNFVRAFSN
..:: .:::..
NP_005 QVNYEEFVRVLVSK
140
>>NP_001316852 (OMIM: 114183) calmodulin isoform 2 [Homo (113 aa)
initn: 91 init1: 91 opt: 164 Z-score: 192.4 bits: 43.3 E(85289): 0.00056
Smith-Waterman score: 164; 26.7% identity (69.8% similar) in 86 aa overlap (555-639:26-111)
530 540 550 560 570 580
pF1KE4 PEALASIQNHVRKREAPAPEAESKQTEKDPGVQELEALIDTIQKQLKDHSCKDNIREAFQ
:. .. .. . ...:: . ...:::::.
NP_001 MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR
10 20 30 40 50
590 600 610 620 630 640
pF1KE4 IYDKEASGYVDRDMFFKICESLNVPVDDSLVKELLRMCS-HGEGKINYYNFVRAFSN
..::...::.. . .. .:. . : : :..: . :.:..:: .::. ..
NP_001 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
60 70 80 90 100 110
>>NP_001292554 (OMIM: 114182,616249) calmodulin isoform (113 aa)
initn: 91 init1: 91 opt: 164 Z-score: 192.4 bits: 43.3 E(85289): 0.00056
Smith-Waterman score: 164; 26.7% identity (69.8% similar) in 86 aa overlap (555-639:26-111)
530 540 550 560 570 580
pF1KE4 PEALASIQNHVRKREAPAPEAESKQTEKDPGVQELEALIDTIQKQLKDHSCKDNIREAFQ
:. .. .. . ...:: . ...:::::.
NP_001 MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR
10 20 30 40 50
590 600 610 620 630 640
pF1KE4 IYDKEASGYVDRDMFFKICESLNVPVDDSLVKELLRMCS-HGEGKINYYNFVRAFSN
..::...::.. . .. .:. . : : :..: . :.:..:: .::. ..
NP_001 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
60 70 80 90 100 110
>>NP_001292555 (OMIM: 114182,616249) calmodulin isoform (113 aa)
initn: 91 init1: 91 opt: 164 Z-score: 192.4 bits: 43.3 E(85289): 0.00056
Smith-Waterman score: 164; 26.7% identity (69.8% similar) in 86 aa overlap (555-639:26-111)
530 540 550 560 570 580
pF1KE4 PEALASIQNHVRKREAPAPEAESKQTEKDPGVQELEALIDTIQKQLKDHSCKDNIREAFQ
:. .. .. . ...:: . ...:::::.
NP_001 MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR
10 20 30 40 50
590 600 610 620 630 640
pF1KE4 IYDKEASGYVDRDMFFKICESLNVPVDDSLVKELLRMCS-HGEGKINYYNFVRAFSN
..::...::.. . .. .:. . : : :..: . :.:..:: .::. ..
NP_001 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
60 70 80 90 100 110
>>NP_001316853 (OMIM: 114183) calmodulin isoform 2 [Homo (113 aa)
initn: 91 init1: 91 opt: 164 Z-score: 192.4 bits: 43.3 E(85289): 0.00056
Smith-Waterman score: 164; 26.7% identity (69.8% similar) in 86 aa overlap (555-639:26-111)
530 540 550 560 570 580
pF1KE4 PEALASIQNHVRKREAPAPEAESKQTEKDPGVQELEALIDTIQKQLKDHSCKDNIREAFQ
:. .. .. . ...:: . ...:::::.
NP_001 MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR
10 20 30 40 50
590 600 610 620 630 640
pF1KE4 IYDKEASGYVDRDMFFKICESLNVPVDDSLVKELLRMCS-HGEGKINYYNFVRAFSN
..::...::.. . .. .:. . : : :..: . :.:..:: .::. ..
NP_001 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
60 70 80 90 100 110
>>NP_001316855 (OMIM: 114183) calmodulin isoform 2 [Homo (113 aa)
initn: 91 init1: 91 opt: 164 Z-score: 192.4 bits: 43.3 E(85289): 0.00056
Smith-Waterman score: 164; 26.7% identity (69.8% similar) in 86 aa overlap (555-639:26-111)
530 540 550 560 570 580
pF1KE4 PEALASIQNHVRKREAPAPEAESKQTEKDPGVQELEALIDTIQKQLKDHSCKDNIREAFQ
:. .. .. . ...:: . ...:::::.
NP_001 MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR
10 20 30 40 50
590 600 610 620 630 640
pF1KE4 IYDKEASGYVDRDMFFKICESLNVPVDDSLVKELLRMCS-HGEGKINYYNFVRAFSN
..::...::.. . .. .:. . : : :..: . :.:..:: .::. ..
NP_001 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
60 70 80 90 100 110
640 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 00:04:28 2016 done: Sun Nov 6 00:04:29 2016
Total Scan time: 10.210 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]