Result of FASTA (omim) for
pFN21AE4489
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4489, 511 aa
1>>>pF1KE4489 511 - 511 aa - 511 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9447+/-0.000418; mu= 20.0958+/- 0.026
mean_var=62.0182+/-12.370, 0's: 0 Z-trim(109.7): 14 B-trim: 65 in 1/56
Lambda= 0.162860
statistics sampled from 17920 (17932) to 17920 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.571), E-opt: 0.2 (0.21), width: 16
Scan time: 9.100
The best scores are: opt bits E(85289)
NP_001684 (OMIM: 124480,606939,616455) V-type prot ( 511) 3354 797.2 0
NP_001683 (OMIM: 192132,267300) V-type proton ATPa ( 513) 2871 683.7 3.5e-196
XP_011531209 (OMIM: 192132,267300) PREDICTED: V-ty ( 553) 2704 644.5 2.4e-184
NP_001244264 (OMIM: 164360,615228,616045) ATP synt ( 503) 387 100.0 1.7e-20
NP_001001935 (OMIM: 164360,615228,616045) ATP synt ( 503) 387 100.0 1.7e-20
NP_001001937 (OMIM: 164360,615228,616045) ATP synt ( 553) 387 100.1 1.8e-20
NP_004037 (OMIM: 164360,615228,616045) ATP synthas ( 553) 387 100.1 1.8e-20
XP_016881278 (OMIM: 164360,615228,616045) PREDICTE ( 586) 387 100.1 1.9e-20
NP_001677 (OMIM: 102910) ATP synthase subunit beta ( 529) 368 95.6 3.9e-19
NP_001244263 (OMIM: 164360,615228,616045) ATP synt ( 531) 328 86.2 2.6e-16
NP_001681 (OMIM: 607027) V-type proton ATPase cata ( 617) 305 80.8 1.3e-14
>>NP_001684 (OMIM: 124480,606939,616455) V-type proton A (511 aa)
initn: 3354 init1: 3354 opt: 3354 Z-score: 4256.4 bits: 797.2 E(85289): 0
Smith-Waterman score: 3354; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511)
10 20 30 40 50 60
pF1KE4 MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVNGPLVIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVNGPLVIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 DHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 TPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 NSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNMET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNMET
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 ITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 QLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDIG
430 440 450 460 470 480
490 500 510
pF1KE4 WQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
:::::::::::::::::::::::::::::::
NP_001 WQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
490 500 510
>>NP_001683 (OMIM: 192132,267300) V-type proton ATPase s (513 aa)
initn: 2870 init1: 2870 opt: 2871 Z-score: 3643.1 bits: 683.7 E(85289): 3.5e-196
Smith-Waterman score: 2871; 87.4% identity (96.5% similar) in 492 aa overlap (19-509:12-503)
10 20 30 40 50
pF1KE4 MALRAMRGIVNGAAPELPVPTGGPAVGA-REQALAVSRNYLSQPRLTYKTVSGVNGPLVI
.: .. .:: ::. ::.:::...::.::.:: .::::::.
NP_001 MAMEIDSRPGGLPGSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVV
10 20 30 40 50
60 70 80 90 100 110
pF1KE4 LDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDIL
::.::: .::::::.::::::.::::::::.:.::.::::::::::::.::.::::::::
NP_001 LDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDIL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE4 RTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDG
:::::::::::::::::::::.::::.::::::: ::::::. ::::::::::::: ::
NP_001 RTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 MNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNME
:::::::::::::::::::::::::::::::::::::: :.:: ..::::::::::::::
NP_001 MNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNME
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE4 TARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTD
::::::::::.::.: ::::::::::::::::::::::::::::::::::::::::::::
NP_001 TARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTD
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE4 MSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPND
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
NP_001 MSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPND
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE4 DITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVS
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::.:::
NP_001 DITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVS
360 370 380 390 400 410
420 430 440 450 460 470
pF1KE4 NQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDI
:::::::::::::::::::::::::::.::::::::::::.::: :::::::.:::.::.
NP_001 NQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDL
420 430 440 450 460 470
480 490 500 510
pF1KE4 GWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
::.:::::::::::::::....::: :..:
NP_001 GWKLLRIFPKEMLKRIPQAVIDEFYSREGALQDLAPDTAL
480 490 500 510
>>XP_011531209 (OMIM: 192132,267300) PREDICTED: V-type p (553 aa)
initn: 2696 init1: 2696 opt: 2704 Z-score: 3430.6 bits: 644.5 E(85289): 2.4e-184
Smith-Waterman score: 2704; 90.8% identity (97.8% similar) in 445 aa overlap (65-509:99-543)
40 50 60 70 80 90
pF1KE4 VSRNYLSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKA
: .::::::.::::::.::::::::.:.::
XP_011 EVASQCQLNFLGILMASKGLWNISVSATWVFAQYAEIVHFTLPDGTQRSGQVLEVAGTKA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE4 VVQVFEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIM
.::::::::::::.::.:::::::::::::::::::::::::::::.::::.:::::::
XP_011 IVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDIN
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE4 GQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVK
::::::. ::::::::::::: :: :::::::::::::::::::::::::::::::::::
XP_011 GQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVK
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE4 KSKDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIIT
::: :.:: ..::::::::::::::::::::::::.::.: :::::::::::::::::::
XP_011 KSKAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIIT
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE4 PRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATI
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE4 YERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINV
::::::::::.:::::::::::::::::::::::::.:::::::::::::::::::::::
XP_011 YERAGRVEGRGGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINV
370 380 390 400 410 420
400 410 420 430 440 450
pF1KE4 LPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEF
:::::::::::::::::::::.::::::::::::::::::::::::::::::.:::::::
XP_011 LPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEF
430 440 450 460 470 480
460 470 480 490 500 510
pF1KE4 LQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
:::::.::: :::::::.:::.::.::.:::::::::::::::....::: :..:
XP_011 LQKFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRIPQAVIDEFYSREGALQDLA
490 500 510 520 530 540
XP_011 PDTAL
550
>>NP_001244264 (OMIM: 164360,615228,616045) ATP synthase (503 aa)
initn: 357 init1: 135 opt: 387 Z-score: 489.0 bits: 100.0 E(85289): 1.7e-20
Smith-Waterman score: 392; 25.7% identity (57.2% similar) in 439 aa overlap (70-503:44-457)
40 50 60 70 80 90
pF1KE4 LSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVF
:.:... .: : :. :.. ... : ::
NP_001 TSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SGLK--GMSLNLEPDNVGVVVF
20 30 40 50 60
100 110 120 130 140 150
pF1KE4 EGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPV-VLAEDFLDIMGQP
:.. . . . :: :. .::.:..:::: .. :. :: .::. .. . . .
NP_001 -GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPG
70 80 90 100 110 120
160 170 180 190 200 210
pF1KE4 INPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKS
: : :: .: .::::.:.:.. :.:::. :.. .. :: . : : :.
NP_001 IIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRF
130 140 150 160 170 180
220 230 240 250 260 270
pF1KE4 KDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR
.: : ... . : ..:.: . :. . . . . .: . . :.: . . ..:
NP_001 NDGSDEKKKLYCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPY
190 200 210 220 230 240
280 290 300 310 320 330
pF1KE4 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE
. . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. . . :
NP_001 SGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
250 260 270 280 290 300
340 350 360 370 380 390
pF1KE4 RAGRVEGR--NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINV
::.... .::.: .:.. :.. :: . ::.:::... .: . : : :::
NP_001 RAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV
310 320 330 340 350 360
400 410 420 430 440 450
pF1KE4 LPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEF
:.:: .: . . .:.. . : ..: :. : : . .. . : .
NP_001 GLSVSR-----VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRG
370 380 390 400 410
460 470 480 490 500 510
pF1KE4 LQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
.. : .. :: : .. : . . . .: . : .. : ...:
NP_001 VRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQ
420 430 440 450 460
NP_001 HQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
470 480 490 500
>>NP_001001935 (OMIM: 164360,615228,616045) ATP synthase (503 aa)
initn: 357 init1: 135 opt: 387 Z-score: 489.0 bits: 100.0 E(85289): 1.7e-20
Smith-Waterman score: 392; 25.7% identity (57.2% similar) in 439 aa overlap (70-503:44-457)
40 50 60 70 80 90
pF1KE4 LSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVF
:.:... .: : :. :.. ... : ::
NP_001 TSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SGLK--GMSLNLEPDNVGVVVF
20 30 40 50 60
100 110 120 130 140 150
pF1KE4 EGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPV-VLAEDFLDIMGQP
:.. . . . :: :. .::.:..:::: .. :. :: .::. .. . . .
NP_001 -GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPG
70 80 90 100 110 120
160 170 180 190 200 210
pF1KE4 INPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKS
: : :: .: .::::.:.:.. :.:::. :.. .. :: . : : :.
NP_001 IIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRF
130 140 150 160 170 180
220 230 240 250 260 270
pF1KE4 KDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR
.: : ... . : ..:.: . :. . . . . .: . . :.: . . ..:
NP_001 NDGSDEKKKLYCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPY
190 200 210 220 230 240
280 290 300 310 320 330
pF1KE4 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE
. . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. . . :
NP_001 SGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
250 260 270 280 290 300
340 350 360 370 380 390
pF1KE4 RAGRVEGR--NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINV
::.... .::.: .:.. :.. :: . ::.:::... .: . : : :::
NP_001 RAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV
310 320 330 340 350 360
400 410 420 430 440 450
pF1KE4 LPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEF
:.:: .: . . .:.. . : ..: :. : : . .. . : .
NP_001 GLSVSR-----VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRG
370 380 390 400 410
460 470 480 490 500 510
pF1KE4 LQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
.. : .. :: : .. : . . . .: . : .. : ...:
NP_001 VRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQ
420 430 440 450 460
NP_001 HQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
470 480 490 500
>>NP_001001937 (OMIM: 164360,615228,616045) ATP synthase (553 aa)
initn: 357 init1: 135 opt: 387 Z-score: 488.4 bits: 100.1 E(85289): 1.8e-20
Smith-Waterman score: 392; 25.7% identity (57.2% similar) in 439 aa overlap (70-503:94-507)
40 50 60 70 80 90
pF1KE4 LSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVF
:.:... .: : :. :.. ... : ::
NP_001 TSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SGLK--GMSLNLEPDNVGVVVF
70 80 90 100 110
100 110 120 130 140 150
pF1KE4 EGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPV-VLAEDFLDIMGQP
:.. . . . :: :. .::.:..:::: .. :. :: .::. .. . . .
NP_001 -GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPG
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE4 INPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKS
: : :: .: .::::.:.:.. :.:::. :.. .. :: . : : :.
NP_001 IIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRF
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE4 KDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR
.: : ... . : ..:.: . :. . . . . .: . . :.: . . ..:
NP_001 NDGSDEKKKLYCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPY
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE4 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE
. . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. . . :
NP_001 SGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
300 310 320 330 340 350
340 350 360 370 380 390
pF1KE4 RAGRVEGR--NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINV
::.... .::.: .:.. :.. :: . ::.:::... .: . : : :::
NP_001 RAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV
360 370 380 390 400 410
400 410 420 430 440 450
pF1KE4 LPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEF
:.:: .: . . .:.. . : ..: :. : : . .. . : .
NP_001 GLSVSR-----VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRG
420 430 440 450 460
460 470 480 490 500 510
pF1KE4 LQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
.. : .. :: : .. : . . . .: . : .. : ...:
NP_001 VRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQ
470 480 490 500 510
NP_001 HQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
520 530 540 550
>>NP_004037 (OMIM: 164360,615228,616045) ATP synthase su (553 aa)
initn: 357 init1: 135 opt: 387 Z-score: 488.4 bits: 100.1 E(85289): 1.8e-20
Smith-Waterman score: 392; 25.7% identity (57.2% similar) in 439 aa overlap (70-503:94-507)
40 50 60 70 80 90
pF1KE4 LSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVF
:.:... .: : :. :.. ... : ::
NP_004 TSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SGLK--GMSLNLEPDNVGVVVF
70 80 90 100 110
100 110 120 130 140 150
pF1KE4 EGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPV-VLAEDFLDIMGQP
:.. . . . :: :. .::.:..:::: .. :. :: .::. .. . . .
NP_004 -GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPG
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE4 INPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKS
: : :: .: .::::.:.:.. :.:::. :.. .. :: . : : :.
NP_004 IIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRF
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE4 KDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR
.: : ... . : ..:.: . :. . . . . .: . . :.: . . ..:
NP_004 NDGSDEKKKLYCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPY
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE4 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE
. . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. . . :
NP_004 SGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
300 310 320 330 340 350
340 350 360 370 380 390
pF1KE4 RAGRVEGR--NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINV
::.... .::.: .:.. :.. :: . ::.:::... .: . : : :::
NP_004 RAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV
360 370 380 390 400 410
400 410 420 430 440 450
pF1KE4 LPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEF
:.:: .: . . .:.. . : ..: :. : : . .. . : .
NP_004 GLSVSR-----VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRG
420 430 440 450 460
460 470 480 490 500 510
pF1KE4 LQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
.. : .. :: : .. : . . . .: . : .. : ...:
NP_004 VRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQ
470 480 490 500 510
NP_004 HQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
520 530 540 550
>>XP_016881278 (OMIM: 164360,615228,616045) PREDICTED: A (586 aa)
initn: 357 init1: 135 opt: 387 Z-score: 488.0 bits: 100.1 E(85289): 1.9e-20
Smith-Waterman score: 392; 25.7% identity (57.2% similar) in 439 aa overlap (70-503:94-507)
40 50 60 70 80 90
pF1KE4 LSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVF
:.:... .: : :. :.. ... : ::
XP_016 TSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SGLK--GMSLNLEPDNVGVVVF
70 80 90 100 110
100 110 120 130 140 150
pF1KE4 EGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPV-VLAEDFLDIMGQP
:.. . . . :: :. .::.:..:::: .. :. :: .::. .. . . .
XP_016 -GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPG
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE4 INPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKS
: : :: .: .::::.:.:.. :.:::. :.. .. :: . : : :.
XP_016 IIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRF
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE4 KDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR
.: : ... . : ..:.: . :. . . . . .: . . :.: . . ..:
XP_016 NDGSDEKKKLYCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPY
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE4 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE
. . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. . . :
XP_016 SGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
300 310 320 330 340 350
340 350 360 370 380 390
pF1KE4 RAGRVEGR--NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINV
::.... .::.: .:.. :.. :: . ::.:::... .: . : : :::
XP_016 RAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV
360 370 380 390 400 410
400 410 420 430 440 450
pF1KE4 LPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEF
:.:: .: . . .:.. . : ..: :. : : . .. . : .
XP_016 GLSVSR-----VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRG
420 430 440 450 460
460 470 480 490 500 510
pF1KE4 LQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
.. : .. :: : .. : . . . .: . : .. : ...:
XP_016 VRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQ
470 480 490 500 510
XP_016 HQALLGTIRYECNCWHLFLKLCLRYEVKIIFKSVVRLVIKTFSRSELTTCFYFQIGLMER
520 530 540 550 560 570
>>NP_001677 (OMIM: 102910) ATP synthase subunit beta, mi (529 aa)
initn: 384 init1: 140 opt: 368 Z-score: 464.6 bits: 95.6 E(85289): 3.9e-19
Smith-Waterman score: 445; 25.7% identity (55.0% similar) in 513 aa overlap (8-503:15-499)
10 20 30 40 50
pF1KE4 MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGV
: . .: .: . . : :. :.: .: . :. ...
NP_001 MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKA-GAA
10 20 30 40 50
60 70 80 90 100
pF1KE4 NGPLV-----ILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVS---GSKAVVQV-FEGTSG
.: .: ..: :.: . . .: ... ::::. : ..: . ..:: :
NP_001 TGRIVAVIGAVVD-VQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE4 IDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPVVLAEDFLDIMGQPINPQCR
. .. . .: .. ::. . :::..: :.::: :::. ...: : .. . .
NP_001 L-VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIK-TKQFAPIHAEAPEFMEM
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE4 IYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYS
.:.. :::...: . :.: :: .:..::. .. . .. . : :.. ::
NP_001 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN---VAKAHG--GYS
180 190 200 210 220 230
230 240 250 260 270
pF1KE4 EENFAIVFAAMGVNMETARFFKSDFEENGSMD------NVCLFLNLANDPTIERIITPRL
:::..: . . . .. :.: .. .: : . :.: : .
NP_001 ------VFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALT
240 250 260 270 280
280 290 300 310 320 330
pF1KE4 ALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYER
.::.::.. : . ::... .. ...: :::: ..:. :. . ::..:. ::
NP_001 GLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQER
290 300 310 320 330 340
340 350 360 370 380 390
pF1KE4 AGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPS
. ..::::.. . .: ::.: : : : .. ..: . . ::: .. : :
NP_001 I--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDS
350 360 370 380 390 400
400 410 420 430 440 450
pF1KE4 LSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQK
::.: : . ..: ::. . :..: . :..: . :. .: : . .:
NP_001 TSRIMDPNI----VGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARK
410 420 430 440 450
460 470 480 490 500 510
pF1KE4 FERNFIAQGPYENRTVFETLDIGWQLLRIFP-KEMLKRIPQSTLSEFYPRDSAKH
..: :..: :.. :: : .: .. : :: .: . : .:.
NP_001 IQR-FLSQ-PFQVAEVF-TGHMG----KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGP
460 470 480 490 500 510
NP_001 IEEAVAKADKLAEEHSS
520
>>NP_001244263 (OMIM: 164360,615228,616045) ATP synthase (531 aa)
initn: 305 init1: 132 opt: 328 Z-score: 413.7 bits: 86.2 E(85289): 2.6e-16
Smith-Waterman score: 341; 23.7% identity (53.2% similar) in 489 aa overlap (35-503:21-485)
10 20 30 40 50 60
pF1KE4 AMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVNGPLVILDHVK
:::: :.. .. .. . : : ..
NP_001 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAE
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 FPRYAE--IVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDI--LR
. : :. ...:.:: .. . : :. : ...:.. ::.. . .
NP_001 MSSILEERILGADTSVDLEETGRVLSIGDGIARVH---GLRNVQAEEM-VEFSSGLKGMS
60 70 80 90 100
130 140 150 160
pF1KE4 TPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCR---------IYPE----
. : .: : :. : : .: .: . :. ::. . : : :.
NP_001 LNLEPDNVGVVVFGNDKLIKEGDIV--KRTGAIVDGPIGSKTRRRVGLKAPGIIPRISVR
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE4 EMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKSKDVVDYSEEN
: .::::.:.:.. :.:::. :.. .. :: . : : :. .: : ...
NP_001 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRFNDGSDEKKKL
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE4 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA
. : ..:.: . :. . . . . .: . . :.: . . ..: . . .:..
NP_001 YCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF-
230 240 250 260 270
290 300 310 320 330 340
pF1KE4 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR--
. ::.:.: :.:. : : :..: .. :::...:: .. . . :::....
NP_001 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
280 290 300 310 320 330
350 360 370 380 390 400
pF1KE4 NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS
.::.: .:.. :.. :: . ::.:::... .: . : : ::: :.::
NP_001 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR----
340 350 360 370 380 390
410 420 430 440 450 460
pF1KE4 AIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIA
.: . . .:.. . : ..: :. : : . .. . : . .. : ..
NP_001 -VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRGVRLTE--LLK
400 410 420 430 440 450
470 480 490 500 510
pF1KE4 QGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
:: : .. : . . . .: . : .. : ...:
NP_001 QGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQHQALLGTIRA
460 470 480 490 500
NP_001 DGKISEQSDAKLKEIVTNFLAGFEA
510 520 530
511 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 00:47:56 2016 done: Sun Nov 6 00:47:57 2016
Total Scan time: 9.100 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]