Result of FASTA (ccds) for
pFN21AE4489
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4489, 511 aa
1>>>pF1KE4489 511 - 511 aa - 511 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2797+/-0.000966; mu= 18.1884+/- 0.058
mean_var=59.8596+/-11.923, 0's: 0 Z-trim(102.9): 21 B-trim: 3 in 1/52
Lambda= 0.165770
statistics sampled from 7138 (7145) to 7138 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.585), E-opt: 0.2 (0.219), width: 16
Scan time: 3.070
The best scores are: opt bits E(32554)
CCDS6014.1 ATP6V1B2 gene_id:526|Hs108|chr8 ( 511) 3354 810.9 0
CCDS1912.1 ATP6V1B1 gene_id:525|Hs108|chr2 ( 513) 2871 695.4 3.9e-200
CCDS58620.1 ATP5A1 gene_id:498|Hs108|chr18 ( 503) 387 101.3 2.6e-21
CCDS11927.1 ATP5A1 gene_id:498|Hs108|chr18 ( 553) 387 101.4 2.8e-21
CCDS8924.1 ATP5B gene_id:506|Hs108|chr12 ( 529) 368 96.8 6.4e-20
CCDS59315.1 ATP5A1 gene_id:498|Hs108|chr18 ( 531) 328 87.2 4.8e-17
CCDS2976.1 ATP6V1A gene_id:523|Hs108|chr3 ( 617) 305 81.8 2.5e-15
>>CCDS6014.1 ATP6V1B2 gene_id:526|Hs108|chr8 (511 aa)
initn: 3354 init1: 3354 opt: 3354 Z-score: 4330.8 bits: 810.9 E(32554): 0
Smith-Waterman score: 3354; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511)
10 20 30 40 50 60
pF1KE4 MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVNGPLVIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVNGPLVIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 DHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 DHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 TPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 TPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 NSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNMET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 NSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNMET
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 ARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 ITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 ITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 QLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 QLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDIG
430 440 450 460 470 480
490 500 510
pF1KE4 WQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
:::::::::::::::::::::::::::::::
CCDS60 WQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
490 500 510
>>CCDS1912.1 ATP6V1B1 gene_id:525|Hs108|chr2 (513 aa)
initn: 2870 init1: 2870 opt: 2871 Z-score: 3706.5 bits: 695.4 E(32554): 3.9e-200
Smith-Waterman score: 2871; 87.4% identity (96.5% similar) in 492 aa overlap (19-509:12-503)
10 20 30 40 50
pF1KE4 MALRAMRGIVNGAAPELPVPTGGPAVGA-REQALAVSRNYLSQPRLTYKTVSGVNGPLVI
.: .. .:: ::. ::.:::...::.::.:: .::::::.
CCDS19 MAMEIDSRPGGLPGSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVV
10 20 30 40 50
60 70 80 90 100 110
pF1KE4 LDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDIL
::.::: .::::::.::::::.::::::::.:.::.::::::::::::.::.::::::::
CCDS19 LDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDIL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE4 RTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDG
:::::::::::::::::::::.::::.::::::: ::::::. ::::::::::::: ::
CCDS19 RTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 MNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNME
:::::::::::::::::::::::::::::::::::::: :.:: ..::::::::::::::
CCDS19 MNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNME
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE4 TARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTD
::::::::::.::.: ::::::::::::::::::::::::::::::::::::::::::::
CCDS19 TARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTD
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE4 MSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPND
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
CCDS19 MSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPND
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE4 DITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVS
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::.:::
CCDS19 DITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVS
360 370 380 390 400 410
420 430 440 450 460 470
pF1KE4 NQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFETLDI
:::::::::::::::::::::::::::.::::::::::::.::: :::::::.:::.::.
CCDS19 NQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDL
420 430 440 450 460 470
480 490 500 510
pF1KE4 GWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
::.:::::::::::::::....::: :..:
CCDS19 GWKLLRIFPKEMLKRIPQAVIDEFYSREGALQDLAPDTAL
480 490 500 510
>>CCDS58620.1 ATP5A1 gene_id:498|Hs108|chr18 (503 aa)
initn: 357 init1: 135 opt: 387 Z-score: 496.1 bits: 101.3 E(32554): 2.6e-21
Smith-Waterman score: 392; 25.7% identity (57.2% similar) in 439 aa overlap (70-503:44-457)
40 50 60 70 80 90
pF1KE4 LSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVF
:.:... .: : :. :.. ... : ::
CCDS58 TSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SGLK--GMSLNLEPDNVGVVVF
20 30 40 50 60
100 110 120 130 140 150
pF1KE4 EGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPV-VLAEDFLDIMGQP
:.. . . . :: :. .::.:..:::: .. :. :: .::. .. . . .
CCDS58 -GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPG
70 80 90 100 110 120
160 170 180 190 200 210
pF1KE4 INPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKS
: : :: .: .::::.:.:.. :.:::. :.. .. :: . : : :.
CCDS58 IIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRF
130 140 150 160 170 180
220 230 240 250 260 270
pF1KE4 KDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR
.: : ... . : ..:.: . :. . . . . .: . . :.: . . ..:
CCDS58 NDGSDEKKKLYCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPY
190 200 210 220 230 240
280 290 300 310 320 330
pF1KE4 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE
. . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. . . :
CCDS58 SGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
250 260 270 280 290 300
340 350 360 370 380 390
pF1KE4 RAGRVEGR--NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINV
::.... .::.: .:.. :.. :: . ::.:::... .: . : : :::
CCDS58 RAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV
310 320 330 340 350 360
400 410 420 430 440 450
pF1KE4 LPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEF
:.:: .: . . .:.. . : ..: :. : : . .. . : .
CCDS58 GLSVSR-----VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRG
370 380 390 400 410
460 470 480 490 500 510
pF1KE4 LQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
.. : .. :: : .. : . . . .: . : .. : ...:
CCDS58 VRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQ
420 430 440 450 460
CCDS58 HQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
470 480 490 500
>>CCDS11927.1 ATP5A1 gene_id:498|Hs108|chr18 (553 aa)
initn: 357 init1: 135 opt: 387 Z-score: 495.4 bits: 101.4 E(32554): 2.8e-21
Smith-Waterman score: 392; 25.7% identity (57.2% similar) in 439 aa overlap (70-503:94-507)
40 50 60 70 80 90
pF1KE4 LSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVF
:.:... .: : :. :.. ... : ::
CCDS11 TSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SGLK--GMSLNLEPDNVGVVVF
70 80 90 100 110
100 110 120 130 140 150
pF1KE4 EGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPV-VLAEDFLDIMGQP
:.. . . . :: :. .::.:..:::: .. :. :: .::. .. . . .
CCDS11 -GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPG
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE4 INPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKS
: : :: .: .::::.:.:.. :.:::. :.. .. :: . : : :.
CCDS11 IIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRF
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE4 KDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR
.: : ... . : ..:.: . :. . . . . .: . . :.: . . ..:
CCDS11 NDGSDEKKKLYCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPY
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE4 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE
. . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. . . :
CCDS11 SGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
300 310 320 330 340 350
340 350 360 370 380 390
pF1KE4 RAGRVEGR--NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINV
::.... .::.: .:.. :.. :: . ::.:::... .: . : : :::
CCDS11 RAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV
360 370 380 390 400 410
400 410 420 430 440 450
pF1KE4 LPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEF
:.:: .: . . .:.. . : ..: :. : : . .. . : .
CCDS11 GLSVSR-----VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRG
420 430 440 450 460
460 470 480 490 500 510
pF1KE4 LQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
.. : .. :: : .. : . . . .: . : .. : ...:
CCDS11 VRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQ
470 480 490 500 510
CCDS11 HQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
520 530 540 550
>>CCDS8924.1 ATP5B gene_id:506|Hs108|chr12 (529 aa)
initn: 384 init1: 140 opt: 368 Z-score: 471.2 bits: 96.8 E(32554): 6.4e-20
Smith-Waterman score: 445; 25.7% identity (55.0% similar) in 513 aa overlap (8-503:15-499)
10 20 30 40 50
pF1KE4 MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGV
: . .: .: . . : :. :.: .: . :. ...
CCDS89 MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKA-GAA
10 20 30 40 50
60 70 80 90 100
pF1KE4 NGPLV-----ILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVS---GSKAVVQV-FEGTSG
.: .: ..: :.: . . .: ... ::::. : ..: . ..:: :
CCDS89 TGRIVAVIGAVVD-VQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE4 IDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID-RGPVVLAEDFLDIMGQPINPQCR
. .. . .: .. ::. . :::..: :.::: :::. ...: : .. . .
CCDS89 L-VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIK-TKQFAPIHAEAPEFMEM
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE4 IYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYS
.:.. :::...: . :.: :: .:..::. .. . .. . : :.. ::
CCDS89 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN---VAKAHG--GYS
180 190 200 210 220 230
230 240 250 260 270
pF1KE4 EENFAIVFAAMGVNMETARFFKSDFEENGSMD------NVCLFLNLANDPTIERIITPRL
:::..: . . . .. :.: .. .: : . :.: : .
CCDS89 ------VFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALT
240 250 260 270 280
280 290 300 310 320 330
pF1KE4 ALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYER
.::.::.. : . ::... .. ...: :::: ..:. :. . ::..:. ::
CCDS89 GLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQER
290 300 310 320 330 340
340 350 360 370 380 390
pF1KE4 AGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPS
. ..::::.. . .: ::.: : : : .. ..: . . ::: .. : :
CCDS89 I--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDS
350 360 370 380 390 400
400 410 420 430 440 450
pF1KE4 LSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQK
::.: : . ..: ::. . :..: . :..: . :. .: : . .:
CCDS89 TSRIMDPNI----VGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARK
410 420 430 440 450
460 470 480 490 500 510
pF1KE4 FERNFIAQGPYENRTVFETLDIGWQLLRIFP-KEMLKRIPQSTLSEFYPRDSAKH
..: :..: :.. :: : .: .. : :: .: . : .:.
CCDS89 IQR-FLSQ-PFQVAEVF-TGHMG----KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGP
460 470 480 490 500 510
CCDS89 IEEAVAKADKLAEEHSS
520
>>CCDS59315.1 ATP5A1 gene_id:498|Hs108|chr18 (531 aa)
initn: 305 init1: 132 opt: 328 Z-score: 419.4 bits: 87.2 E(32554): 4.8e-17
Smith-Waterman score: 341; 23.7% identity (53.2% similar) in 489 aa overlap (35-503:21-485)
10 20 30 40 50 60
pF1KE4 AMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPRLTYKTVSGVNGPLVILDHVK
:::: :.. .. .. . : : ..
CCDS59 MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAE
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 FPRYAE--IVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDI--LR
. : :. ...:.:: .. . : :. : ...:.. ::.. . .
CCDS59 MSSILEERILGADTSVDLEETGRVLSIGDGIARVH---GLRNVQAEEM-VEFSSGLKGMS
60 70 80 90 100
130 140 150 160
pF1KE4 TPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCR---------IYPE----
. : .: : :. : : .: .: . :. ::. . : : :.
CCDS59 LNLEPDNVGVVVFGNDKLIKEGDIV--KRTGAIVDGPIGSKTRRRVGLKAPGIIPRISVR
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE4 EMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKSKDVVDYSEEN
: .::::.:.:.. :.:::. :.. .. :: . : : :. .: : ...
CCDS59 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRFNDGSDEKKKL
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE4 FAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLA
. : ..:.: . :. . . . . .: . . :.: . . ..: . . .:..
CCDS59 YCI-YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF-
230 240 250 260 270
290 300 310 320 330 340
pF1KE4 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR--
. ::.:.: :.:. : : :..: .. :::...:: .. . . :::....
CCDS59 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
280 290 300 310 320 330
350 360 370 380 390 400
pF1KE4 NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS
.::.: .:.. :.. :: . ::.:::... .: . : : ::: :.::
CCDS59 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSR----
340 350 360 370 380 390
410 420 430 440 450 460
pF1KE4 AIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIA
.: . . .:.. . : ..: :. : : . .. . : . .. : ..
CCDS59 -VGSAAQTRAMKQVAGTMKLELAQYREVAAF-AQFGSDLDAATQQLLSRGVRLTE--LLK
400 410 420 430 440 450
470 480 490 500 510
pF1KE4 QGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
:: : .. : . . . .: . : .. : ...:
CCDS59 QGQYSPMAIEEQVAVIYAGVRGY----LDKLEPSKITKFENAFLSHVVSQHQALLGTIRA
460 470 480 490 500
CCDS59 DGKISEQSDAKLKEIVTNFLAGFEA
510 520 530
>>CCDS2976.1 ATP6V1A gene_id:523|Hs108|chr3 (617 aa)
initn: 206 init1: 155 opt: 305 Z-score: 388.7 bits: 81.8 E(32554): 2.5e-15
Smith-Waterman score: 306; 24.3% identity (55.6% similar) in 374 aa overlap (148-499:201-558)
120 130 140 150 160 170
pF1KE4 ILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEM-----IQT
: : .. :. : : :.. . :
CCDS29 RNRGTVTYIAPPGNYDTSDVVLELEFEGVKEKFTMVQVWPVR-QVRPVTEKLPANHPLLT
180 190 200 210 220
180 190 200 210 220 230
pF1KE4 GISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFA
: ..:.. ..: : .: : .. :. .. . . ..::. : . .
CCDS29 GQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYS-----NSDVIIY------VGCG
230 240 250 260 270
240 250 260 270 280
pF1KE4 AMGVNM-ETAR-FFKSDFEENGSMDNV----CLFLNLANDPTIERIITPRLALTTAEFLA
: .: :. : : . .: .:..... : : .: :. : . ..: .:..
CCDS29 ERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYF-
280 290 300 310 320 330
290 300 310 320 330 340
pF1KE4 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE--G-
. :: .. . : .::::::.:. :.:. :.:.:. . ::..:::::::. :
CCDS29 RDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGN
340 350 360 370 380 390
350 360 370 380 390 400
pF1KE4 --RNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRL
:.::.. . .. :. :.. :. . : :.. .:..: .:. .: .: : : :.
CCDS29 PEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKY
400 410 420 430 440 450
410 420 430 440 450
pF1KE4 MKSAIGEGMTRK--DHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFE
:. :. : . .. . . . .. .:. . .::. .:. : . :: . ..
CCDS29 MR-ALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIK
460 470 480 490 500 510
460 470 480 490 500 510
pF1KE4 RNFIAQG---PYENRTVF-ETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
.:. :. ::. : .:. . ... .. .: .: ..:
CCDS29 DDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFY--DMARRAVETTAQSDNKITWSIIREHM
520 530 540 550 560 570
CCDS29 GDILYKLSSMKFKDPLKDGEAKIKSDYAQLLEDMQNAFRSLED
580 590 600 610
511 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 00:47:55 2016 done: Sun Nov 6 00:47:56 2016
Total Scan time: 3.070 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]