FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE4415, 429 aa
  1>>>pF1KE4415 429 - 429 aa - 429 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5098+/-0.000967; mu= 15.9448+/- 0.057
 mean_var=64.2801+/-13.406, 0's: 0 Z-trim(104.0): 31  B-trim: 0 in 0/48
 Lambda= 0.159969
 statistics sampled from 7670 (7695) to 7670 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.603), E-opt: 0.2 (0.236), width:  16
 Scan time:  2.810

The best scores are:                                      opt bits E(32554)
CCDS44757.1 SLC37A2 gene_id:219855|Hs108|chr11     ( 501)  247 66.0 9.2e-11
CCDS31714.1 SLC37A2 gene_id:219855|Hs108|chr11     ( 505)  247 66.0 9.2e-11


>>CCDS44757.1 SLC37A2 gene_id:219855|Hs108|chr11          (501 aa)
 initn: 263 init1: 117 opt: 247  Z-score: 306.7  bits: 66.0 E(32554): 9.2e-11
Smith-Waterman score: 301; 23.6% identity (54.7% similar) in 424 aa overlap (43-421:77-485)

             20        30        40            50        60        
pF1KE4 IFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDD----LGFITSSQSAAYAISKFVSG
                                     :.:::.    :: . ..   ::::. :.::
CCDS44 KSRLHQNCSEQIKPINDTHSLNDTMWCSWAPFDKDNYKELLGGVDNAFLIAYAIGMFISG
         50        60        70        80        90       100      

       70        80        90            100       110       120   
pF1KE4 VLSDQMSARWLFSSGLLLVGLVNIFFA----WS-STVPVFAALWFLNGLAQGLGWPPCGK
       :.....  :. .:.:.:: :: . .:.    :.   .  :...   :::.:  :::    
CCDS44 VFGERLPLRYYLSAGMLLSGLFTSLFGLGYFWNIHELWYFVVIQVCNGLVQTTGWPSVVT
        110       120       130       140       150       160      

           130       140       150       160       170       180   
pF1KE4 VLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVSFLC
        . .::  .. :   .: ..  .... :: ..: : ... .:  .. . : . .:.. . 
CCDS44 CVGNWFGKGKRGFIMGIWNSHTSVGNILGSLIAGIWVNG-QWGLSFIVPGIITAVMGVIT
        170       180       190       200        210       220     

                         190       200                    210      
pF1KE4 LLLI--------------HNEPADVGLRNLDPMPS-------------EGKKGSLKEEST
       .:..              :.:::.      ::  :             . .::  .: ..
CCDS44 FLFLIEHPEDVDCAPPQHHGEPAENQDNPEDPGNSPCSIRESGLETVAKCSKGPCEEPAA
         230       240       250       260       270       280     

        220         230       240       250       260       270    
pF1KE4 LQEL--LLSPYLWVLSTGYLVVFGVKTCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGL
       .. .  :  : .  .:   : .  :.     :  ... .    ::  ...  . ..:::.
CCDS44 ISFFGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIANVAHFSAKEAGDLSTLFDVGGI
         290       300       310       320       330       340     

          280       290       300       310       320       330    
pF1KE4 VGSIAAGYLSDRAMAKAGLSNYGNPRHGLLLFMMAGMTVSMYLFRVTVTSDSPKLWILVL
       .:.:.:: .:: . ..:           ..:.. : :   :.:.   . .:.    :..:
CCDS44 IGGIVAGLVSDYTNGRATTCC-------VMLILAAPM---MFLYNY-IGQDGIASSIVML
         350       360              370          380        390    

          340         350       360          370       380         
pF1KE4 GAVFGFSSYGPIALF--GVIANESAPPNLCGTSHA---IVGLMANVGGFLAGL-PF-STI
         . :    :: ::.  .: :. ..  .: :...:   ..... ..:.. :.: :. . .
CCDS44 -IICGGLVNGPYALITTAVSADLGTHKSLKGNAKALSTVTAIIDGTGSIGAALGPLLAGL
           400       410       420       430       440       450   

       390       400       410       420                 
pF1KE4 AKHYSWSTAFWVAEVICAASTAAFFLLRNIRTKMGRVSKKAE        
        .  .:...:..  .: :   : ..: : .  ..                
CCDS44 ISPTGWNNVFYM--LISADVLACLLLCRLVYKEILAWKVSLSRGSGYKEI
           460         470       480       490       500 

>>CCDS31714.1 SLC37A2 gene_id:219855|Hs108|chr11          (505 aa)
 initn: 263 init1: 117 opt: 247  Z-score: 306.7  bits: 66.0 E(32554): 9.2e-11
Smith-Waterman score: 301; 23.6% identity (54.7% similar) in 424 aa overlap (43-421:77-485)

             20        30        40            50        60        
pF1KE4 IFSAMFGGYSLYYFNRKTFSFVMPSLVEEIPLDKDD----LGFITSSQSAAYAISKFVSG
                                     :.:::.    :: . ..   ::::. :.::
CCDS31 KSRLHQNCSEQIKPINDTHSLNDTMWCSWAPFDKDNYKELLGGVDNAFLIAYAIGMFISG
         50        60        70        80        90       100      

       70        80        90            100       110       120   
pF1KE4 VLSDQMSARWLFSSGLLLVGLVNIFFA----WS-STVPVFAALWFLNGLAQGLGWPPCGK
       :.....  :. .:.:.:: :: . .:.    :.   .  :...   :::.:  :::    
CCDS31 VFGERLPLRYYLSAGMLLSGLFTSLFGLGYFWNIHELWYFVVIQVCNGLVQTTGWPSVVT
        110       120       130       140       150       160      

           130       140       150       160       170       180   
pF1KE4 VLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLALSGALCVVVSFLC
        . .::  .. :   .: ..  .... :: ..: : ... .:  .. . : . .:.. . 
CCDS31 CVGNWFGKGKRGFIMGIWNSHTSVGNILGSLIAGIWVNG-QWGLSFIVPGIITAVMGVIT
        170       180       190       200        210       220     

                         190       200                    210      
pF1KE4 LLLI--------------HNEPADVGLRNLDPMPS-------------EGKKGSLKEEST
       .:..              :.:::.      ::  :             . .::  .: ..
CCDS31 FLFLIEHPEDVDCAPPQHHGEPAENQDNPEDPGNSPCSIRESGLETVAKCSKGPCEEPAA
         230       240       250       260       270       280     

        220         230       240       250       260       270    
pF1KE4 LQEL--LLSPYLWVLSTGYLVVFGVKTCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGL
       .. .  :  : .  .:   : .  :.     :  ... .    ::  ...  . ..:::.
CCDS31 ISFFGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIANVAHFSAKEAGDLSTLFDVGGI
         290       300       310       320       330       340     

          280       290       300       310       320       330    
pF1KE4 VGSIAAGYLSDRAMAKAGLSNYGNPRHGLLLFMMAGMTVSMYLFRVTVTSDSPKLWILVL
       .:.:.:: .:: . ..:           ..:.. : :   :.:.   . .:.    :..:
CCDS31 IGGIVAGLVSDYTNGRATTCC-------VMLILAAPM---MFLYNY-IGQDGIASSIVML
         350       360              370          380        390    

          340         350       360          370       380         
pF1KE4 GAVFGFSSYGPIALF--GVIANESAPPNLCGTSHA---IVGLMANVGGFLAGL-PF-STI
         . :    :: ::.  .: :. ..  .: :...:   ..... ..:.. :.: :. . .
CCDS31 -IICGGLVNGPYALITTAVSADLGTHKSLKGNAKALSTVTAIIDGTGSIGAALGPLLAGL
           400       410       420       430       440       450   

       390       400       410       420                     
pF1KE4 AKHYSWSTAFWVAEVICAASTAAFFLLRNIRTKMGRVSKKAE            
        .  .:...:..  .: :   : ..: : .  ..                    
CCDS31 ISPTGWNNVFYM--LISADVLACLLLCRLVYKEILAWKVSLSRGSGSSMVLTHQ
           460         470       480       490       500     




429 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 01:15:38 2016 done: Sun Nov  6 01:15:38 2016
 Total Scan time:  2.810 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]