Result of FASTA (omim) for
pFN21AE4413
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4413, 426 aa
1>>>pF1KE4413 426 - 426 aa - 426 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9691+/-0.000505; mu= 9.5330+/- 0.032
mean_var=117.5652+/-23.899, 0's: 0 Z-trim(109.7): 114 B-trim: 0 in 0/55
Lambda= 0.118286
statistics sampled from 17858 (17963) to 17858 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.554), E-opt: 0.2 (0.211), width: 16
Scan time: 8.200
The best scores are: opt bits E(85289)
NP_740752 (OMIM: 602983) small conductance calcium ( 426) 2744 480.0 5e-135
NP_002240 (OMIM: 602983) small conductance calcium ( 731) 2709 474.2 4.9e-133
NP_067627 (OMIM: 605879) small conductance calcium ( 579) 2199 387.1 6.4e-107
XP_011541691 (OMIM: 605879) PREDICTED: small condu ( 857) 2199 387.2 8.8e-107
XP_011541689 (OMIM: 605879) PREDICTED: small condu ( 857) 2199 387.2 8.8e-107
XP_005259964 (OMIM: 602982) PREDICTED: small condu ( 623) 2036 359.3 1.6e-98
NP_002239 (OMIM: 602982) small conductance calcium ( 543) 2020 356.5 9.5e-98
XP_005259963 (OMIM: 602982) PREDICTED: small condu ( 626) 2020 356.5 1.1e-97
XP_011526306 (OMIM: 602982) PREDICTED: small condu ( 626) 2020 356.5 1.1e-97
XP_011526307 (OMIM: 602982) PREDICTED: small condu ( 546) 2004 353.8 6.3e-97
XP_005259962 (OMIM: 602982) PREDICTED: small condu ( 629) 2004 353.8 7.1e-97
NP_001191016 (OMIM: 602983) small conductance calc ( 746) 1590 283.2 1.5e-75
XP_016864946 (OMIM: 605879) PREDICTED: small condu ( 275) 1193 215.2 1.7e-55
NP_740721 (OMIM: 605879) small conductance calcium ( 231) 1090 197.6 2.8e-50
NP_001265133 (OMIM: 605879) small conductance calc ( 231) 1090 197.6 2.8e-50
NP_002241 (OMIM: 602754,616689) intermediate condu ( 427) 1080 196.0 1.5e-49
XP_005258939 (OMIM: 602754,616689) PREDICTED: inte ( 395) 972 177.6 5e-44
XP_005258940 (OMIM: 602754,616689) PREDICTED: inte ( 364) 656 123.6 8e-28
XP_011525240 (OMIM: 602754,616689) PREDICTED: inte ( 259) 448 88.0 2.9e-17
NP_065748 (OMIM: 602906) potassium voltage-gated c ( 477) 172 41.1 0.0073
>>NP_740752 (OMIM: 602983) small conductance calcium-act (426 aa)
initn: 2744 init1: 2744 opt: 2744 Z-score: 2545.2 bits: 480.0 E(85289): 5e-135
Smith-Waterman score: 2744; 100.0% identity (100.0% similar) in 426 aa overlap (1-426:1-426)
10 20 30 40 50 60
pF1KE4 MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_740 MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 ISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_740 ISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 SKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_740 SKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 DQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_740 DQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 LELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_740 LELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 QAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_740 QAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 LTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_740 LTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPY
370 380 390 400 410 420
pF1KE4 TSSSSC
::::::
NP_740 TSSSSC
>>NP_002240 (OMIM: 602983) small conductance calcium-act (731 aa)
initn: 2709 init1: 2709 opt: 2709 Z-score: 2509.4 bits: 474.2 E(85289): 4.9e-133
Smith-Waterman score: 2709; 100.0% identity (100.0% similar) in 421 aa overlap (6-426:311-731)
10 20 30
pF1KE4 MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTR
::::::::::::::::::::::::::::::
NP_002 KRLSDYALIFGMFGIVVMVIETELSWGLYSKDSMFSLALKCLISLSTIILLGLIIAYHTR
290 300 310 320 330 340
40 50 60 70 80 90
pF1KE4 EVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAE
350 360 370 380 390 400
100 110 120 130 140 150
pF1KE4 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
410 420 430 440 450 460
160 170 180 190 200 210
pF1KE4 TVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCG
470 480 490 500 510 520
220 230 240 250 260 270
pF1KE4 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETW
530 540 550 560 570 580
280 290 300 310 320 330
pF1KE4 LIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYD
590 600 610 620 630 640
340 350 360 370 380 390
pF1KE4 LITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSV
650 660 670 680 690 700
400 410 420
pF1KE4 AVGTTHTPISDSPIGVSSTSFPTPYTSSSSC
:::::::::::::::::::::::::::::::
NP_002 AVGTTHTPISDSPIGVSSTSFPTPYTSSSSC
710 720 730
>>NP_067627 (OMIM: 605879) small conductance calcium-act (579 aa)
initn: 2199 init1: 2199 opt: 2199 Z-score: 2040.5 bits: 387.1 E(85289): 6.4e-107
Smith-Waterman score: 2199; 81.1% identity (92.8% similar) in 418 aa overlap (6-423:162-579)
10 20 30
pF1KE4 MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTR
: :..::::::::::::::::::::.::.:
NP_067 KRLSDYALIFGMFGIVVMVIETELSWGAYDKASLYSLALKCLISLSTIILLGLIIVYHAR
140 150 160 170 180 190
40 50 60 70 80 90
pF1KE4 EVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAE
:.:::..::::::::::::::::..: ::.::::::::::.: : :::::::::.:: .
NP_067 EIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAPSTTT
200 210 220 230 240 250
100 110 120 130 140 150
pF1KE4 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
260 270 280 290 300 310
160 170 180 190 200 210
pF1KE4 TVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCG
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::.::::
NP_067 TVLLVFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPNTYCG
320 330 340 350 360 370
220 230 240 250 260 270
pF1KE4 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETW
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
NP_067 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETW
380 390 400 410 420 430
280 290 300 310 320 330
pF1KE4 LIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYD
::::.:::.::::::::::::::::::::::::::::::::.:::::::::.: ::.:::
NP_067 LIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLVDLAKTQNIMYD
440 450 460 470 480 490
340 350 360 370 380 390
pF1KE4 LITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSV
.:..::.::::.::.: .::.::: : .:...:: ::..:.::::.... : .:. :
NP_067 MISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLISQTIRQQQRDFIEAQMESYDKHV
500 510 520 530 540 550
400 410 420
pF1KE4 AVGTTHTPISDSPIGVSSTSFPTPYTSSSSC
. .. .. :. :::. :: ::
NP_067 TYNAERSRSSSRRRRSSSTAPPTSSESS
560 570
>>XP_011541691 (OMIM: 605879) PREDICTED: small conductan (857 aa)
initn: 2199 init1: 2199 opt: 2199 Z-score: 2038.0 bits: 387.2 E(85289): 8.8e-107
Smith-Waterman score: 2199; 81.1% identity (92.8% similar) in 418 aa overlap (6-423:440-857)
10 20 30
pF1KE4 MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTR
: :..::::::::::::::::::::.::.:
XP_011 KRLSDYALIFGMFGIVVMVIETELSWGAYDKASLYSLALKCLISLSTIILLGLIIVYHAR
410 420 430 440 450 460
40 50 60 70 80 90
pF1KE4 EVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAE
:.:::..::::::::::::::::..: ::.::::::::::.: : :::::::::.:: .
XP_011 EIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAPSTTT
470 480 490 500 510 520
100 110 120 130 140 150
pF1KE4 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
530 540 550 560 570 580
160 170 180 190 200 210
pF1KE4 TVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCG
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::.::::
XP_011 TVLLVFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPNTYCG
590 600 610 620 630 640
220 230 240 250 260 270
pF1KE4 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETW
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
XP_011 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETW
650 660 670 680 690 700
280 290 300 310 320 330
pF1KE4 LIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYD
::::.:::.::::::::::::::::::::::::::::::::.:::::::::.: ::.:::
XP_011 LIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLVDLAKTQNIMYD
710 720 730 740 750 760
340 350 360 370 380 390
pF1KE4 LITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSV
.:..::.::::.::.: .::.::: : .:...:: ::..:.::::.... : .:. :
XP_011 MISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLISQTIRQQQRDFIEAQMESYDKHV
770 780 790 800 810 820
400 410 420
pF1KE4 AVGTTHTPISDSPIGVSSTSFPTPYTSSSSC
. .. .. :. :::. :: ::
XP_011 TYNAERSRSSSRRRRSSSTAPPTSSESS
830 840 850
>>XP_011541689 (OMIM: 605879) PREDICTED: small conductan (857 aa)
initn: 2199 init1: 2199 opt: 2199 Z-score: 2038.0 bits: 387.2 E(85289): 8.8e-107
Smith-Waterman score: 2199; 81.1% identity (92.8% similar) in 418 aa overlap (6-423:440-857)
10 20 30
pF1KE4 MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTR
: :..::::::::::::::::::::.::.:
XP_011 KRLSDYALIFGMFGIVVMVIETELSWGAYDKASLYSLALKCLISLSTIILLGLIIVYHAR
410 420 430 440 450 460
40 50 60 70 80 90
pF1KE4 EVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAE
:.:::..::::::::::::::::..: ::.::::::::::.: : :::::::::.:: .
XP_011 EIQLFMVDNGADDWRIAMTYERIFFICLEILVCAIHPIPGNYTFTWTARLAFSYAPSTTT
470 480 490 500 510 520
100 110 120 130 140 150
pF1KE4 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
530 540 550 560 570 580
160 170 180 190 200 210
pF1KE4 TVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCG
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::.::::
XP_011 TVLLVFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPNTYCG
590 600 610 620 630 640
220 230 240 250 260 270
pF1KE4 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETW
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
XP_011 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETW
650 660 670 680 690 700
280 290 300 310 320 330
pF1KE4 LIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYD
::::.:::.::::::::::::::::::::::::::::::::.:::::::::.: ::.:::
XP_011 LIYKNTKLVKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLVDLAKTQNIMYD
710 720 730 740 750 760
340 350 360 370 380 390
pF1KE4 LITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSV
.:..::.::::.::.: .::.::: : .:...:: ::..:.::::.... : .:. :
XP_011 MISDLNERSEDFEKRIVTLETKLETLIGSIHALPGLISQTIRQQQRDFIEAQMESYDKHV
770 780 790 800 810 820
400 410 420
pF1KE4 AVGTTHTPISDSPIGVSSTSFPTPYTSSSSC
. .. .. :. :::. :: ::
XP_011 TYNAERSRSSSRRRRSSSTAPPTSSESS
830 840 850
>>XP_005259964 (OMIM: 602982) PREDICTED: small conductan (623 aa)
initn: 2010 init1: 2010 opt: 2036 Z-score: 1889.7 bits: 359.3 E(85289): 1.6e-98
Smith-Waterman score: 2036; 81.2% identity (95.4% similar) in 372 aa overlap (6-377:217-588)
10 20 30
pF1KE4 MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTR
:.:..:.:::::::::: :::::.. ::.:
XP_005 KRLSDYALIFGMFGIVVMVTETELSWGVYTKESLYSFALKCLISLSTAILLGLVVLYHAR
190 200 210 220 230 240
40 50 60 70 80 90
pF1KE4 EVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAE
:.:::..:::::::::::: ::.. ::::. ::::::.::.:.: :::::::.:.:: ::
XP_005 EIQLFMVDNGADDWRIAMTCERVFLISLELAVCAIHPVPGHYRFTWTARLAFTYAPSVAE
250 260 270 280 290 300
100 110 120 130 140 150
pF1KE4 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
::::..:::::::::::..::::::::.:::::::::::::::.::::::::::::::::
XP_005 ADVDVLLSIPMFLRLYLLGRVMLLHSKIFTDASSRSIGALNKITFNTRFVMKTLMTICPG
310 320 330 340 350 360
160 170 180 190 200 210
pF1KE4 TVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCG
::::::::: ::::::::::::::::.:.:::::::::::::::::::::::::::::::
XP_005 TVLLVFSISSWIIAAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCG
370 380 390 400 410 420
220 230 240 250 260 270
pF1KE4 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETW
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
XP_005 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETW
430 440 450 460 470 480
280 290 300 310 320 330
pF1KE4 LIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYD
::::::.:.:: :.:.:::::::::::::::::::.:: ::.::::::.::.: :.::::
XP_005 LIYKHTRLVKKPDQARVRKHQRKFLQAIHQLRSVKIEQGKLNDQANTLTDLAKTQTVMYD
490 500 510 520 530 540
340 350 360 370 380 390
pF1KE4 LITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSV
:..::. . :.:: ....:::.:. : ::...:: :::...:
XP_005 LVSELHAQHEELEARLATLESRLDALGASLQALPGLIAQAIRPPPPPLPPRPGPGPQDQA
550 560 570 580 590 600
400 410 420
pF1KE4 AVGTTHTPISDSPIGVSSTSFPTPYTSSSSC
XP_005 ARSSPCRWTPVAPSDCG
610 620
>>NP_002239 (OMIM: 602982) small conductance calcium-act (543 aa)
initn: 2025 init1: 1778 opt: 2020 Z-score: 1875.9 bits: 356.5 E(85289): 9.5e-98
Smith-Waterman score: 2020; 80.5% identity (94.7% similar) in 375 aa overlap (6-377:134-508)
10 20 30
pF1KE4 MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTR
:.:..:.:::::::::: :::::.. ::.:
NP_002 KRLSDYALIFGMFGIVVMVTETELSWGVYTKESLYSFALKCLISLSTAILLGLVVLYHAR
110 120 130 140 150 160
40 50 60 70 80 90
pF1KE4 EVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAE
:.:::..:::::::::::: ::.. ::::. ::::::.::.:.: :::::::.:.:: ::
NP_002 EIQLFMVDNGADDWRIAMTCERVFLISLELAVCAIHPVPGHYRFTWTARLAFTYAPSVAE
170 180 190 200 210 220
100 110 120 130 140 150
pF1KE4 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
::::..:::::::::::..::::::::.:::::::::::::::.::::::::::::::::
NP_002 ADVDVLLSIPMFLRLYLLGRVMLLHSKIFTDASSRSIGALNKITFNTRFVMKTLMTICPG
230 240 250 260 270 280
160 170 180 190 200 210
pF1KE4 TVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCG
::::::::: ::::::::::::::::.:.:::::::::::::::::::::::::::::::
NP_002 TVLLVFSISSWIIAAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCG
290 300 310 320 330 340
220 230 240 250 260 270
pF1KE4 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETW
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
NP_002 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETW
350 360 370 380 390 400
280 290 300 310 320 330
pF1KE4 LIYKHTKLLKKIDHAKVRKHQRKFLQAIHQ---LRSVKMEQRKLSDQANTLVDLSKMQNV
::::::.:.:: :.:.:::::::::::::: :::::.:: ::.::::::.::.: :.:
NP_002 LIYKHTRLVKKPDQARVRKHQRKFLQAIHQAQKLRSVKIEQGKLNDQANTLTDLAKTQTV
410 420 430 440 450 460
340 350 360 370 380 390
pF1KE4 MYDLITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIEARG
::::..::. . :.:: ....:::.:. : ::...:: :::...:
NP_002 MYDLVSELHAQHEELEARLATLESRLDALGASLQALPGLIAQAIRPPPPPLPPRPGPGPQ
470 480 490 500 510 520
400 410 420
pF1KE4 VSVAVGTTHTPISDSPIGVSSTSFPTPYTSSSSC
NP_002 DQAARSSPCRWTPVAPSDCG
530 540
>>XP_005259963 (OMIM: 602982) PREDICTED: small conductan (626 aa)
initn: 2025 init1: 1778 opt: 2020 Z-score: 1875.0 bits: 356.5 E(85289): 1.1e-97
Smith-Waterman score: 2020; 80.5% identity (94.7% similar) in 375 aa overlap (6-377:217-591)
10 20 30
pF1KE4 MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTR
:.:..:.:::::::::: :::::.. ::.:
XP_005 KRLSDYALIFGMFGIVVMVTETELSWGVYTKESLYSFALKCLISLSTAILLGLVVLYHAR
190 200 210 220 230 240
40 50 60 70 80 90
pF1KE4 EVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAE
:.:::..:::::::::::: ::.. ::::. ::::::.::.:.: :::::::.:.:: ::
XP_005 EIQLFMVDNGADDWRIAMTCERVFLISLELAVCAIHPVPGHYRFTWTARLAFTYAPSVAE
250 260 270 280 290 300
100 110 120 130 140 150
pF1KE4 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
::::..:::::::::::..::::::::.:::::::::::::::.::::::::::::::::
XP_005 ADVDVLLSIPMFLRLYLLGRVMLLHSKIFTDASSRSIGALNKITFNTRFVMKTLMTICPG
310 320 330 340 350 360
160 170 180 190 200 210
pF1KE4 TVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCG
::::::::: ::::::::::::::::.:.:::::::::::::::::::::::::::::::
XP_005 TVLLVFSISSWIIAAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCG
370 380 390 400 410 420
220 230 240 250 260 270
pF1KE4 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETW
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
XP_005 KGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETW
430 440 450 460 470 480
280 290 300 310 320 330
pF1KE4 LIYKHTKLLKKIDHAKVRKHQRKFLQAIHQ---LRSVKMEQRKLSDQANTLVDLSKMQNV
::::::.:.:: :.:.:::::::::::::: :::::.:: ::.::::::.::.: :.:
XP_005 LIYKHTRLVKKPDQARVRKHQRKFLQAIHQAQKLRSVKIEQGKLNDQANTLTDLAKTQTV
490 500 510 520 530 540
340 350 360 370 380 390
pF1KE4 MYDLITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIEARG
::::..::. . :.:: ....:::.:. : ::...:: :::...:
XP_005 MYDLVSELHAQHEELEARLATLESRLDALGASLQALPGLIAQAIRPPPPPLPPRPGPGPQ
550 560 570 580 590 600
400 410 420
pF1KE4 VSVAVGTTHTPISDSPIGVSSTSFPTPYTSSSSC
XP_005 DQAARSSPCRWTPVAPSDCG
610 620
>>XP_011526306 (OMIM: 602982) PREDICTED: small conductan (626 aa)
initn: 2025 init1: 1065 opt: 2020 Z-score: 1875.0 bits: 356.5 E(85289): 1.1e-97
Smith-Waterman score: 2020; 80.5% identity (94.7% similar) in 375 aa overlap (6-377:217-591)
10 20 30
pF1KE4 MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTR
:.:..:.:::::::::: :::::.. ::.:
XP_011 KRLSDYALIFGMFGIVVMVTETELSWGVYTKESLYSFALKCLISLSTAILLGLVVLYHAR
190 200 210 220 230 240
40 50 60 70 80 90
pF1KE4 EVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAE
:.:::..:::::::::::: ::.. ::::. ::::::.::.:.: :::::::.:.:: ::
XP_011 EIQLFMVDNGADDWRIAMTCERVFLISLELAVCAIHPVPGHYRFTWTARLAFTYAPSVAE
250 260 270 280 290 300
100 110 120 130 140 150
pF1KE4 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
::::..:::::::::::..::::::::.:::::::::::::::.::::::::::::::::
XP_011 ADVDVLLSIPMFLRLYLLGRVMLLHSKIFTDASSRSIGALNKITFNTRFVMKTLMTICPG
310 320 330 340 350 360
160 170 180 190 200 210
pF1KE4 TVLLVFSISLWIIAAWTVRVCER---YHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHT
::::::::: ::::::::::::: :::.:.::::::::::::::::::::::::::::
XP_011 TVLLVFSISSWIIAAWTVRVCERENMYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHT
370 380 390 400 410 420
220 230 240 250 260 270
pF1KE4 YCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLR
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_011 YCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLR
430 440 450 460 470 480
280 290 300 310 320 330
pF1KE4 ETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNV
:::::::::.:.:: :.:.:::::::::::::::::::.:: ::.::::::.::.: :.:
XP_011 ETWLIYKHTRLVKKPDQARVRKHQRKFLQAIHQLRSVKIEQGKLNDQANTLTDLAKTQTV
490 500 510 520 530 540
340 350 360 370 380 390
pF1KE4 MYDLITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIEARG
::::..::. . :.:: ....:::.:. : ::...:: :::...:
XP_011 MYDLVSELHAQHEELEARLATLESRLDALGASLQALPGLIAQAIRPPPPPLPPRPGPGPQ
550 560 570 580 590 600
400 410 420
pF1KE4 VSVAVGTTHTPISDSPIGVSSTSFPTPYTSSSSC
XP_011 DQAARSSPCRWTPVAPSDCG
610 620
>>XP_011526307 (OMIM: 602982) PREDICTED: small conductan (546 aa)
initn: 1221 init1: 974 opt: 2004 Z-score: 1861.1 bits: 353.8 E(85289): 6.3e-97
Smith-Waterman score: 2004; 79.9% identity (93.9% similar) in 378 aa overlap (6-377:134-511)
10 20 30
pF1KE4 MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTR
:.:..:.:::::::::: :::::.. ::.:
XP_011 KRLSDYALIFGMFGIVVMVTETELSWGVYTKESLYSFALKCLISLSTAILLGLVVLYHAR
110 120 130 140 150 160
40 50 60 70 80 90
pF1KE4 EVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAE
:.:::..:::::::::::: ::.. ::::. ::::::.::.:.: :::::::.:.:: ::
XP_011 EIQLFMVDNGADDWRIAMTCERVFLISLELAVCAIHPVPGHYRFTWTARLAFTYAPSVAE
170 180 190 200 210 220
100 110 120 130 140 150
pF1KE4 ADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPG
::::..:::::::::::..::::::::.:::::::::::::::.::::::::::::::::
XP_011 ADVDVLLSIPMFLRLYLLGRVMLLHSKIFTDASSRSIGALNKITFNTRFVMKTLMTICPG
230 240 250 260 270 280
160 170 180 190 200 210
pF1KE4 TVLLVFSISLWIIAAWTVRVCER---YHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHT
::::::::: ::::::::::::: :::.:.::::::::::::::::::::::::::::
XP_011 TVLLVFSISSWIIAAWTVRVCERENMYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHT
290 300 310 320 330 340
220 230 240 250 260 270
pF1KE4 YCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLR
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_011 YCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLR
350 360 370 380 390 400
280 290 300 310 320
pF1KE4 ETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQ---LRSVKMEQRKLSDQANTLVDLSKM
:::::::::.:.:: :.:.:::::::::::::: :::::.:: ::.::::::.::.:
XP_011 ETWLIYKHTRLVKKPDQARVRKHQRKFLQAIHQAQKLRSVKIEQGKLNDQANTLTDLAKT
410 420 430 440 450 460
330 340 350 360 370 380
pF1KE4 QNVMYDLITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIE
:.:::::..::. . :.:: ....:::.:. : ::...:: :::...:
XP_011 QTVMYDLVSELHAQHEELEARLATLESRLDALGASLQALPGLIAQAIRPPPPPLPPRPGP
470 480 490 500 510 520
390 400 410 420
pF1KE4 ARGVSVAVGTTHTPISDSPIGVSSTSFPTPYTSSSSC
XP_011 GPQDQAARSSPCRWTPVAPSDCG
530 540
426 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 01:16:14 2016 done: Sun Nov 6 01:16:15 2016
Total Scan time: 8.200 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]