Result of FASTA (ccds) for
pFN21AE4389
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4389, 408 aa
1>>>pF1KE4389 408 - 408 aa - 408 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1903+/-0.000871; mu= 17.1999+/- 0.052
mean_var=62.1068+/-12.487, 0's: 0 Z-trim(105.2): 21 B-trim: 0 in 0/50
Lambda= 0.162744
statistics sampled from 8275 (8283) to 8275 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.63), E-opt: 0.2 (0.254), width: 16
Scan time: 2.750
The best scores are: opt bits E(32554)
CCDS2844.1 ACY1 gene_id:95|Hs108|chr3 ( 408) 2781 661.7 3.4e-190
CCDS56263.1 ACY1 gene_id:95|Hs108|chr3 ( 373) 2336 557.2 8.9e-159
CCDS56261.1 ACY1 gene_id:95|Hs108|chr3 ( 336) 1595 383.2 1.9e-106
CCDS56262.1 ACY1 gene_id:95|Hs108|chr3 ( 343) 1498 360.5 1.4e-99
>>CCDS2844.1 ACY1 gene_id:95|Hs108|chr3 (408 aa)
initn: 2781 init1: 2781 opt: 2781 Z-score: 3528.1 bits: 661.7 E(32554): 3.4e-190
Smith-Waterman score: 2781; 100.0% identity (100.0% similar) in 408 aa overlap (1-408:1-408)
10 20 30 40 50 60
pF1KE4 MTSKGPEEEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 MTSKGPEEEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 YLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIANP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 YLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIANP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 TDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDTAAEKLHKVVNSILAFREKEWQRLQSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 TDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDTAAEKLHKVVNSILAFREKEWQRLQSN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 PHLKEGSVTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 PHLKEGSVTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 VTLEFAQKWMHPQVTPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 VTLEFAQKWMHPQVTPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPAL
310 320 330 340 350 360
370 380 390 400
pF1KE4 GFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASVPALPSDS
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 GFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASVPALPSDS
370 380 390 400
>>CCDS56263.1 ACY1 gene_id:95|Hs108|chr3 (373 aa)
initn: 2335 init1: 2335 opt: 2336 Z-score: 2964.0 bits: 557.2 E(32554): 8.9e-159
Smith-Waterman score: 2467; 91.4% identity (91.4% similar) in 408 aa overlap (1-408:1-373)
10 20 30 40 50 60
pF1KE4 MTSKGPEEEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVV
::::::::::::::::::::::::::::::::
CCDS56 MTSKGPEEEHPSVTLFRQYLRIRTVQPKPDYG----------------------------
10 20 30
70 80 90 100 110 120
pF1KE4 TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 -------TNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQ
40 50 60 70 80
130 140 150 160 170 180
pF1KE4 YLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIANP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 YLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIANP
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE4 TDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDTAAEKLHKVVNSILAFREKEWQRLQSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDTAAEKLHKVVNSILAFREKEWQRLQSN
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE4 PHLKEGSVTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PHLKEGSVTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEG
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE4 VTLEFAQKWMHPQVTPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VTLEFAQKWMHPQVTPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPAL
270 280 290 300 310 320
370 380 390 400
pF1KE4 GFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASVPALPSDS
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASVPALPSDS
330 340 350 360 370
>>CCDS56261.1 ACY1 gene_id:95|Hs108|chr3 (336 aa)
initn: 1592 init1: 1592 opt: 1595 Z-score: 2024.4 bits: 383.2 E(32554): 1.9e-106
Smith-Waterman score: 2133; 82.4% identity (82.4% similar) in 408 aa overlap (1-408:1-336)
10 20 30 40 50 60
pF1KE4 MTSKGPEEEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MTSKGPEEEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQ
::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEG----------------
70 80 90 100
130 140 150 160 170 180
pF1KE4 YLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIANP
::::
CCDS56 --------------------------------------------------------IANP
190 200 210 220 230 240
pF1KE4 TDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDTAAEKLHKVVNSILAFREKEWQRLQSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDTAAEKLHKVVNSILAFREKEWQRLQSN
110 120 130 140 150 160
250 260 270 280 290 300
pF1KE4 PHLKEGSVTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PHLKEGSVTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEG
170 180 190 200 210 220
310 320 330 340 350 360
pF1KE4 VTLEFAQKWMHPQVTPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VTLEFAQKWMHPQVTPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPAL
230 240 250 260 270 280
370 380 390 400
pF1KE4 GFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASVPALPSDS
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASVPALPSDS
290 300 310 320 330
>>CCDS56262.1 ACY1 gene_id:95|Hs108|chr3 (343 aa)
initn: 2345 init1: 1498 opt: 1498 Z-score: 1901.2 bits: 360.5 E(32554): 1.4e-99
Smith-Waterman score: 2219; 84.1% identity (84.1% similar) in 408 aa overlap (1-408:1-343)
10 20 30 40 50 60
pF1KE4 MTSKGPEEEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MTSKGPEEEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 YLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIANP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 YLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIANP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 TDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDTAAEKLHKVVNSILAFREKEWQRLQSN
:::::::::::::::::::::::::::::::::::::::
CCDS56 TDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDTAAEKL---------------------
190 200 210
250 260 270 280 290 300
pF1KE4 PHLKEGSVTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEG
::::::::::::::::
CCDS56 --------------------------------------------AFEEQLQSWCQAAGEG
220 230
310 320 330 340 350 360
pF1KE4 VTLEFAQKWMHPQVTPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VTLEFAQKWMHPQVTPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPAL
240 250 260 270 280 290
370 380 390 400
pF1KE4 GFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASVPALPSDS
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASVPALPSDS
300 310 320 330 340
408 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 22:55:53 2016 done: Sat Nov 5 22:55:53 2016
Total Scan time: 2.750 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]