Result of FASTA (omim) for
pFN21AE4351
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4351, 365 aa
1>>>pF1KE4351 365 - 365 aa - 365 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5193+/-0.000377; mu= 6.6309+/- 0.024
mean_var=173.8410+/-35.307, 0's: 0 Z-trim(118.7): 202 B-trim: 7 in 2/54
Lambda= 0.097274
statistics sampled from 31675 (31978) to 31675 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.375), width: 16
Scan time: 9.200
The best scores are: opt bits E(85289)
NP_001329 (OMIM: 602621) coxsackievirus and adenov ( 365) 2422 352.0 1.2e-96
NP_001193995 (OMIM: 602621) coxsackievirus and ade ( 352) 2263 329.7 6.2e-90
XP_011527778 (OMIM: 602621) PREDICTED: coxsackievi ( 348) 2257 328.8 1.1e-89
NP_001193992 (OMIM: 602621) coxsackievirus and ade ( 252) 1280 191.6 1.6e-48
XP_011527781 (OMIM: 602621) PREDICTED: coxsackievi ( 252) 1280 191.6 1.6e-48
XP_011527780 (OMIM: 602621) PREDICTED: coxsackievi ( 258) 1280 191.6 1.7e-48
XP_011527779 (OMIM: 602621) PREDICTED: coxsackievi ( 278) 1280 191.6 1.8e-48
NP_001193993 (OMIM: 602621) coxsackievirus and ade ( 200) 916 140.4 3.3e-33
NP_001015887 (OMIM: 608351) immunoglobulin superfa ( 431) 625 99.9 1.1e-20
XP_011510772 (OMIM: 608351) PREDICTED: immunoglobu ( 430) 621 99.3 1.7e-20
NP_689751 (OMIM: 608351) immunoglobulin superfamil ( 430) 621 99.3 1.7e-20
XP_011510771 (OMIM: 608351) PREDICTED: immunoglobu ( 430) 621 99.3 1.7e-20
XP_011510770 (OMIM: 608351) PREDICTED: immunoglobu ( 443) 621 99.3 1.7e-20
XP_011510765 (OMIM: 608351) PREDICTED: immunoglobu ( 480) 621 99.4 1.8e-20
XP_011510766 (OMIM: 608351) PREDICTED: immunoglobu ( 480) 621 99.4 1.8e-20
XP_011510767 (OMIM: 608351) PREDICTED: immunoglobu ( 480) 621 99.4 1.8e-20
XP_011510764 (OMIM: 608351) PREDICTED: immunoglobu ( 481) 621 99.4 1.8e-20
NP_079045 (OMIM: 611693,615237) CXADR-like membran ( 373) 570 92.1 2.2e-18
XP_016861278 (OMIM: 608351) PREDICTED: immunoglobu ( 372) 541 88.0 3.6e-17
XP_006713580 (OMIM: 608351) PREDICTED: immunoglobu ( 372) 541 88.0 3.6e-17
XP_011510776 (OMIM: 608351) PREDICTED: immunoglobu ( 323) 498 82.0 2.1e-15
XP_011510769 (OMIM: 608351) PREDICTED: immunoglobu ( 453) 498 82.1 2.7e-15
NP_005805 (OMIM: 602171) cell surface A33 antigen ( 319) 493 81.2 3.5e-15
NP_001193994 (OMIM: 602621) coxsackievirus and ade ( 89) 469 77.4 1.4e-14
XP_011541300 (OMIM: 611693,615237) PREDICTED: CXAD ( 226) 446 74.5 2.6e-13
NP_055127 (OMIM: 606011) V-set and immunoglobulin ( 327) 429 72.3 1.8e-12
XP_011510773 (OMIM: 608351) PREDICTED: immunoglobu ( 429) 430 72.5 2e-12
XP_011510774 (OMIM: 608351) PREDICTED: immunoglobu ( 406) 418 70.8 6.1e-12
XP_011510768 (OMIM: 608351) PREDICTED: immunoglobu ( 457) 418 70.9 6.6e-12
NP_001316849 (OMIM: 606011) V-set and immunoglobul ( 284) 406 69.0 1.5e-11
NP_872413 (OMIM: 300620) V-set and immunoglobulin ( 387) 392 67.1 7.4e-11
XP_016855494 (OMIM: 602171) PREDICTED: cell surfac ( 211) 371 64.0 3.6e-10
XP_011529238 (OMIM: 300620) PREDICTED: V-set and i ( 442) 372 64.4 5.7e-10
XP_005262184 (OMIM: 300620) PREDICTED: V-set and i ( 449) 372 64.4 5.7e-10
NP_001164024 (OMIM: 300620) V-set and immunoglobul ( 423) 344 60.4 8.4e-09
XP_016861279 (OMIM: 608351) PREDICTED: immunoglobu ( 348) 338 59.5 1.3e-08
NP_001171759 (OMIM: 300353) V-set and immunoglobul ( 321) 219 42.8 0.0013
NP_001244332 (OMIM: 300353) V-set and immunoglobul ( 347) 219 42.8 0.0014
XP_005248890 (OMIM: 613593) PREDICTED: butyrophili ( 506) 221 43.3 0.0015
NP_009199 (OMIM: 300353) V-set and immunoglobulin ( 399) 219 42.9 0.0015
NP_008979 (OMIM: 613593) butyrophilin subfamily 3 ( 513) 219 43.0 0.0018
XP_005248891 (OMIM: 613593) PREDICTED: butyrophili ( 352) 216 42.4 0.0019
NP_919423 (OMIM: 613593) butyrophilin subfamily 3 ( 352) 216 42.4 0.0019
NP_001138481 (OMIM: 613593) butyrophilin subfamily ( 378) 216 42.4 0.002
NP_078845 (OMIM: 604376) myelin protein zero-like ( 209) 211 41.5 0.0021
NP_001184163 (OMIM: 613590) butyrophilin subfamily ( 330) 214 42.1 0.0022
NP_510961 (OMIM: 613590) butyrophilin subfamily 2 ( 334) 214 42.1 0.0022
NP_003944 (OMIM: 604376) myelin protein zero-like ( 269) 211 41.6 0.0025
NP_001723 (OMIM: 601610) butyrophilin subfamily 1 ( 526) 214 42.3 0.003
NP_008980 (OMIM: 613590) butyrophilin subfamily 2 ( 527) 214 42.3 0.0031
>>NP_001329 (OMIM: 602621) coxsackievirus and adenovirus (365 aa)
initn: 2422 init1: 2422 opt: 2422 Z-score: 1855.9 bits: 352.0 E(85289): 1.2e-96
Smith-Waterman score: 2422; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:1-365)
10 20 30 40 50 60
pF1KE4 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 GAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPTLPPAKVAAPNLSRMGAIPVMIPAQSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPTLPPAKVAAPNLSRMGAIPVMIPAQSK
310 320 330 340 350 360
pF1KE4 DGSIV
:::::
NP_001 DGSIV
>>NP_001193995 (OMIM: 602621) coxsackievirus and adenovi (352 aa)
initn: 2284 init1: 2263 opt: 2263 Z-score: 1735.5 bits: 329.7 E(85289): 6.2e-90
Smith-Waterman score: 2263; 99.1% identity (99.1% similar) in 343 aa overlap (1-343:1-343)
10 20 30 40 50 60
pF1KE4 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 GAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPTLPPAKVAAPNLSRMGAIPVMIPAQSK
::::::::::::::::::::::::::::::::::::::: :
NP_001 SLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPTLPPAKFKYPYKTDGITVV
310 320 330 340 350
pF1KE4 DGSIV
>>XP_011527778 (OMIM: 602621) PREDICTED: coxsackievirus (348 aa)
initn: 2257 init1: 2257 opt: 2257 Z-score: 1731.1 bits: 328.8 E(85289): 1.1e-89
Smith-Waterman score: 2257; 100.0% identity (100.0% similar) in 339 aa overlap (1-339:1-339)
10 20 30 40 50 60
pF1KE4 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 GAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPTLPPAKVAAPNLSRMGAIPVMIPAQSK
:::::::::::::::::::::::::::::::::::::::
XP_011 SLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPTLPPAKAQGELSLKF
310 320 330 340
pF1KE4 DGSIV
>>NP_001193992 (OMIM: 602621) coxsackievirus and adenovi (252 aa)
initn: 1280 init1: 1280 opt: 1280 Z-score: 991.9 bits: 191.6 E(85289): 1.6e-48
Smith-Waterman score: 1280; 100.0% identity (100.0% similar) in 190 aa overlap (1-190:1-190)
10 20 30 40 50 60
pF1KE4 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIA
::::::::::
NP_001 SQKMPTSWLAGKMCHLQRAVRPLPEATSAVIIHPWGPCLLPTWKDIPRLSITKYQVKTLN
190 200 210 220 230 240
>>XP_011527781 (OMIM: 602621) PREDICTED: coxsackievirus (252 aa)
initn: 1280 init1: 1280 opt: 1280 Z-score: 991.9 bits: 191.6 E(85289): 1.6e-48
Smith-Waterman score: 1280; 100.0% identity (100.0% similar) in 190 aa overlap (1-190:1-190)
10 20 30 40 50 60
pF1KE4 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIA
::::::::::
XP_011 SQKMPTSWLAGKMCHLQRAVRPLPEATSAVIIHPWGPCLLPTWKDIPRLSITKYQVKTLN
190 200 210 220 230 240
>>XP_011527780 (OMIM: 602621) PREDICTED: coxsackievirus (258 aa)
initn: 1280 init1: 1280 opt: 1280 Z-score: 991.8 bits: 191.6 E(85289): 1.7e-48
Smith-Waterman score: 1280; 100.0% identity (100.0% similar) in 190 aa overlap (1-190:1-190)
10 20 30 40 50 60
pF1KE4 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIA
::::::::::
XP_011 SQKMPTSWLAGKMCHLQRAVRPLPEATSAVIIHPWGPCLLPTWKDIPRLSITKYQVKTLN
190 200 210 220 230 240
>>XP_011527779 (OMIM: 602621) PREDICTED: coxsackievirus (278 aa)
initn: 1280 init1: 1280 opt: 1280 Z-score: 991.3 bits: 191.6 E(85289): 1.8e-48
Smith-Waterman score: 1280; 100.0% identity (100.0% similar) in 190 aa overlap (1-190:1-190)
10 20 30 40 50 60
pF1KE4 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIA
::::::::::
XP_011 SQKMPTSWLAGKMCHLQRAVRPLPEATSAVIIHPWGPCLLPTWKDIPRLSITKYQVKTLN
190 200 210 220 230 240
>>NP_001193993 (OMIM: 602621) coxsackievirus and adenovi (200 aa)
initn: 915 init1: 915 opt: 916 Z-score: 717.1 bits: 140.4 E(85289): 3.3e-33
Smith-Waterman score: 916; 94.6% identity (95.9% similar) in 148 aa overlap (1-148:1-144)
10 20 30 40 50 60
pF1KE4 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 KVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD
:::::::::::::::::: : :..
NP_001 KVKKAPGVANKKIHLVVL----GKMCHLQRAVRPLPEATSAVIIHPWGPCLLPTWKDIPR
130 140 150 160 170
>>NP_001015887 (OMIM: 608351) immunoglobulin superfamily (431 aa)
initn: 466 init1: 287 opt: 625 Z-score: 492.1 bits: 99.9 E(85289): 1.1e-20
Smith-Waterman score: 645; 33.6% identity (64.5% similar) in 366 aa overlap (8-360:11-370)
10 20 30 40 50
pF1KE4 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEW
.:: .. : :: .. :. :.:. : ::: :: : . :.. :
NP_001 MTSQRSPLAPLLLLSLHGVAASLEVSESPGSIQVARGQPAVLPCTFTTSAALIN-LNVIW
10 20 30 40 50
60 70 80 90 100 110
pF1KE4 LISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGT
...: .: . . .:::.: ...: : ..::: ::.. . . ..:: ..: :::: ::
NP_001 MVTPLSNANQPEQVILYQGGQMFDGA-PRFHGRVGFTGT-MPATNVSIFINNTQLSDTGT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE4 YQCKVKKAPGVANKKIH---LVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYE
::: :.. : .....: :.::: ::. .: ..::..:::: . : .:: :
NP_001 YQCLVNNLPDIGGRNIGVTGLTVLVPPSAPHCQIQGSQDIGSDVILLCSSEEGIPRPTYL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 WQKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSN
:.::... :.: . ..........: :. :: :.:.. : .:.. ::: :.:. :.
NP_001 WEKLDNTLKLPPTATQDQVQGTVTIRNISALSSGLYQCVASNAIGTSTCLLDLQVISPQP
180 190 200 210 220 230
240 250 260 270 280
pF1KE4 KA-GLIAGAI-IGTLLALALIGLII---FCCRKKRREEKYEKEVHHDIREDVPPPKSRTS
. ::::::: :... . :.::. : :.: .::. :.:. ..:::: ::: ..
NP_001 RNIGLIAGAIGTGAVIIIFCIALILGAFFYWRSKNKEEE-EEEIPNEIREDDLPPKCSSA
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE4 TA-RSYIGS-NHSSLGSMSPSNMEGYS---KTQYNQVPSEDFERTPQSPTLPPAKVAAPN
: .. :.: ....: : . : . .: :.. : : :: .. ... :.
NP_001 KAFHTEISSSDNNTLTSSNAYNSRYWSNNPKVHRNTESVSHFSDLGQSFSFHSGNANIPS
300 310 320 330 340 350
350 360
pF1KE4 LSRMGAIPVMIPAQSKDGSIV
. :. ..:.: :
NP_001 IYANGTH--LVPGQHKTLVVTANRGSSPQVMSRSNGSVSRKPRPPHTHSYTISHATLERI
360 370 380 390 400 410
>>XP_011510772 (OMIM: 608351) PREDICTED: immunoglobulin (430 aa)
initn: 462 init1: 283 opt: 621 Z-score: 489.0 bits: 99.3 E(85289): 1.7e-20
Smith-Waterman score: 641; 33.9% identity (64.7% similar) in 357 aa overlap (17-360:19-369)
10 20 30 40 50
pF1KE4 MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWL
: :: .. :. :.:. : ::: :: : . :.. :.
XP_011 MSLVELLLWWNCFSRTGVAASLEVSESPGSIQVARGQPAVLPCTFTTSAALIN-LNVIWM
10 20 30 40 50
60 70 80 90 100 110
pF1KE4 ISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTY
..: .: . . .:::.: ...: : ..::: ::.. . . ..:: ..: :::: :::
XP_011 VTPLSNANQPEQVILYQGGQMFDGA-PRFHGRVGFTGT-MPATNVSIFINNTQLSDTGTY
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE4 QCKVKKAPGVANKKIH---LVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEW
:: :.. : .....: :.::: ::. .: ..::..:::: . : .:: : :
XP_011 QCLVNNLPDIGGRNIGVTGLTVLVPPSAPHCQIQGSQDIGSDVILLCSSEEGIPRPTYLW
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 QKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNK
.::... :.: . ..........: :. :: :.:.. : .:.. ::: :.:. :. .
XP_011 EKLDNTLKLPPTATQDQVQGTVTIRNISALSSGLYQCVASNAIGTSTCLLDLQVISPQPR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE4 A-GLIAGAI-IGTLLALALIGLII---FCCRKKRREEKYEKEVHHDIREDVPPPKSRTST
::::::: :... . :.::. : :.: .::. :.:. ..:::: ::: ..
XP_011 NIGLIAGAIGTGAVIIIFCIALILGAFFYWRSKNKEEE-EEEIPNEIREDDLPPKCSSAK
240 250 260 270 280 290
300 310 320 330 340
pF1KE4 A-RSYIGS-NHSSLGSMSPSNMEGYS---KTQYNQVPSEDFERTPQSPTLPPAKVAAPNL
: .. :.: ....: : . : . .: :.. : : :: .. ... :..
XP_011 AFHTEISSSDNNTLTSSNAYNSRYWSNNPKVHRNTESVSHFSDLGQSFSFHSGNANIPSI
300 310 320 330 340 350
350 360
pF1KE4 SRMGAIPVMIPAQSKDGSIV
:. ..:.: :
XP_011 YANGTH--LVPGQHKTLVVTANRGSSPQVMSRSNGSVSRKPRPPHTHSYTISHATLERIG
360 370 380 390 400 410
365 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 02:07:51 2016 done: Sun Nov 6 02:07:53 2016
Total Scan time: 9.200 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]