Result of FASTA (omim) for
pFN21AE4325
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4325, 328 aa
1>>>pF1KE4325 328 - 328 aa - 328 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0002+/-0.000322; mu= 19.8723+/- 0.020
mean_var=91.9774+/-18.334, 0's: 0 Z-trim(117.7): 257 B-trim: 685 in 1/52
Lambda= 0.133732
statistics sampled from 29661 (29955) to 29661 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.351), width: 16
Scan time: 6.890
The best scores are: opt bits E(85289)
XP_011531176 (OMIM: 604862,613393) PREDICTED: C-ty ( 328) 2182 430.6 2.2e-120
NP_056532 (OMIM: 604862,613393) C-type lectin doma ( 328) 2182 430.6 2.2e-120
XP_011531177 (OMIM: 604862,613393) PREDICTED: C-ty ( 320) 1842 365.0 1.2e-100
XP_011531178 (OMIM: 604862,613393) PREDICTED: C-ty ( 288) 1805 357.8 1.6e-98
XP_016882280 (OMIM: 616838) PREDICTED: C-type lect ( 243) 339 74.9 1.9e-13
XP_016882279 (OMIM: 616838) PREDICTED: C-type lect ( 293) 339 75.0 2.2e-13
NP_001191047 (OMIM: 616838) C-type lectin domain f ( 378) 340 75.3 2.3e-13
XP_016882275 (OMIM: 616838) PREDICTED: C-type lect ( 310) 339 75.0 2.3e-13
XP_016882274 (OMIM: 616838) PREDICTED: C-type lect ( 310) 339 75.0 2.3e-13
XP_016882278 (OMIM: 616838) PREDICTED: C-type lect ( 310) 339 75.0 2.3e-13
XP_016882277 (OMIM: 616838) PREDICTED: C-type lect ( 310) 339 75.0 2.3e-13
XP_016882276 (OMIM: 616838) PREDICTED: C-type lect ( 310) 339 75.0 2.3e-13
NP_001138378 (OMIM: 605872) C-type lectin domain f ( 263) 320 71.3 2.6e-12
NP_001138379 (OMIM: 605872) C-type lectin domain f ( 332) 318 71.0 4e-12
XP_011518916 (OMIM: 609962) PREDICTED: C-type lect ( 188) 315 70.1 4e-12
NP_055173 (OMIM: 609962) C-type lectin domain fami ( 219) 315 70.2 4.5e-12
NP_001138381 (OMIM: 605872) C-type lectin domain f ( 353) 311 69.7 1e-11
XP_006722677 (OMIM: 605872) PREDICTED: C-type lect ( 343) 307 68.9 1.8e-11
NP_001138376 (OMIM: 605872) C-type lectin domain f ( 348) 307 68.9 1.8e-11
XP_006722675 (OMIM: 605872) PREDICTED: C-type lect ( 371) 307 68.9 1.9e-11
XP_006722676 (OMIM: 605872) PREDICTED: C-type lect ( 371) 307 68.9 1.9e-11
NP_001138377 (OMIM: 605872) C-type lectin domain f ( 375) 307 68.9 1.9e-11
NP_001138382 (OMIM: 605872) C-type lectin domain f ( 376) 307 68.9 1.9e-11
XP_006722674 (OMIM: 605872) PREDICTED: C-type lect ( 398) 307 69.0 1.9e-11
NP_055072 (OMIM: 605872) C-type lectin domain fami ( 399) 307 69.0 1.9e-11
NP_001138367 (OMIM: 604672,607948,609423,614371) C ( 312) 298 67.1 5.5e-11
NP_001193948 (OMIM: 151445) low affinity immunoglo ( 320) 296 66.7 7.3e-11
XP_005272519 (OMIM: 151445) PREDICTED: low affinit ( 321) 296 66.7 7.3e-11
NP_001207429 (OMIM: 151445) low affinity immunoglo ( 321) 296 66.7 7.3e-11
NP_001993 (OMIM: 151445) low affinity immunoglobul ( 321) 296 66.7 7.3e-11
XP_011518934 (OMIM: 609964) PREDICTED: C-type lect ( 215) 290 65.4 1.2e-10
NP_525126 (OMIM: 609964) C-type lectin domain fami ( 215) 290 65.4 1.2e-10
NP_001316999 (OMIM: 605999) C-type lectin domain f ( 289) 291 65.7 1.3e-10
NP_001304928 (OMIM: 613579) C-type lectin domain f ( 179) 285 64.3 2.2e-10
NP_001138365 (OMIM: 604672,607948,609423,614371) C ( 268) 287 64.9 2.2e-10
NP_001007034 (OMIM: 613579) C-type lectin domain f ( 209) 285 64.4 2.4e-10
NP_001231785 (OMIM: 616256) C-type lectin domain f ( 281) 286 64.7 2.6e-10
NP_940894 (OMIM: 616256) C-type lectin domain fami ( 293) 286 64.8 2.6e-10
NP_001138371 (OMIM: 604672,607948,609423,614371) C ( 243) 285 64.5 2.6e-10
NP_006335 (OMIM: 605999) C-type lectin domain fami ( 292) 285 64.6 3e-10
NP_001138369 (OMIM: 604672,607948,609423,614371) C ( 398) 284 64.5 4.2e-10
NP_919429 (OMIM: 605306) C-type lectin domain fami ( 198) 280 63.4 4.5e-10
XP_011518986 (OMIM: 605306) PREDICTED: C-type lect ( 200) 280 63.4 4.5e-10
XP_011522167 (OMIM: 108361) PREDICTED: asialoglyco ( 299) 282 64.0 4.5e-10
XP_011522168 (OMIM: 108361) PREDICTED: asialoglyco ( 299) 282 64.0 4.5e-10
XP_011522165 (OMIM: 108361) PREDICTED: asialoglyco ( 299) 282 64.0 4.5e-10
XP_006721587 (OMIM: 108361) PREDICTED: asialoglyco ( 248) 281 63.7 4.6e-10
XP_011522166 (OMIM: 108361) PREDICTED: asialoglyco ( 318) 282 64.0 4.7e-10
NP_057268 (OMIM: 605306) C-type lectin domain fami ( 237) 280 63.5 5.1e-10
XP_005272529 (OMIM: 604672,607948,609423,614371) P ( 266) 280 63.6 5.5e-10
>>XP_011531176 (OMIM: 604862,613393) PREDICTED: C-type l (328 aa)
initn: 2182 init1: 2182 opt: 2182 Z-score: 2282.4 bits: 430.6 E(85289): 2.2e-120
Smith-Waterman score: 2182; 99.7% identity (100.0% similar) in 328 aa overlap (1-328:1-328)
10 20 30 40 50 60
pF1KE4 MTVEKEAPDAHFTVDKQNISLWPREPPPKSGPSLVPGKTPTVRAALICLTLVLVASVLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTVEKEAPDAHFTVDKQNISLWPREPPPKSGPSLVPGKTPTVRAALICLTLVLVASVLLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AVLYPRFMGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVLYPRFMGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 SQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASALNTKIRALQGSLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASALNTKIRALQGSLEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 MSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 FLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKA
:::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
XP_011 FLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHCGNIKA
250 260 270 280 290 300
310 320
pF1KE4 PSLQAWNDAPCDKTFLFICKRPYVPSEP
::::::::::::::::::::::::::::
XP_011 PSLQAWNDAPCDKTFLFICKRPYVPSEP
310 320
>>NP_056532 (OMIM: 604862,613393) C-type lectin domain f (328 aa)
initn: 2182 init1: 2182 opt: 2182 Z-score: 2282.4 bits: 430.6 E(85289): 2.2e-120
Smith-Waterman score: 2182; 99.7% identity (100.0% similar) in 328 aa overlap (1-328:1-328)
10 20 30 40 50 60
pF1KE4 MTVEKEAPDAHFTVDKQNISLWPREPPPKSGPSLVPGKTPTVRAALICLTLVLVASVLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MTVEKEAPDAHFTVDKQNISLWPREPPPKSGPSLVPGKTPTVRAALICLTLVLVASVLLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AVLYPRFMGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 AVLYPRFMGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 SQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASALNTKIRALQGSLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASALNTKIRALQGSLEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 MSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 FLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKA
:::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
NP_056 FLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHCGNIKA
250 260 270 280 290 300
310 320
pF1KE4 PSLQAWNDAPCDKTFLFICKRPYVPSEP
::::::::::::::::::::::::::::
NP_056 PSLQAWNDAPCDKTFLFICKRPYVPSEP
310 320
>>XP_011531177 (OMIM: 604862,613393) PREDICTED: C-type l (320 aa)
initn: 1842 init1: 1842 opt: 1842 Z-score: 1928.0 bits: 365.0 E(85289): 1.2e-100
Smith-Waterman score: 1842; 99.6% identity (100.0% similar) in 283 aa overlap (1-283:1-283)
10 20 30 40 50 60
pF1KE4 MTVEKEAPDAHFTVDKQNISLWPREPPPKSGPSLVPGKTPTVRAALICLTLVLVASVLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTVEKEAPDAHFTVDKQNISLWPREPPPKSGPSLVPGKTPTVRAALICLTLVLVASVLLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AVLYPRFMGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVLYPRFMGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 SQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASALNTKIRALQGSLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASALNTKIRALQGSLEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 MSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 FLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKA
:::::::::::::::::::::::::::::::::::::.:::::
XP_011 FLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPVAFWSPSVLAGNSLTSW
250 260 270 280 290 300
310 320
pF1KE4 PSLQAWNDAPCDKTFLFICKRPYVPSEP
XP_011 RQLEWKGEFRLKWEGWVERI
310 320
>>XP_011531178 (OMIM: 604862,613393) PREDICTED: C-type l (288 aa)
initn: 1886 init1: 1804 opt: 1805 Z-score: 1890.0 bits: 357.8 E(85289): 1.6e-98
Smith-Waterman score: 1805; 98.9% identity (99.3% similar) in 283 aa overlap (1-283:1-281)
10 20 30 40 50 60
pF1KE4 MTVEKEAPDAHFTVDKQNISLWPREPPPKSGPSLVPGKTPTVRAALICLTLVLVASVLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTVEKEAPDAHFTVDKQNISLWPREPPPKSGPSLVPGKTPTVRAALICLTLVLVASVLLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AVLYPRFMGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVLYPRFMGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 SQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASALNTKIRALQGSLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASALNTKIRALQGSLEN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 MSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 FLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKA
:::::::::::::::::::::::::::::::::::::.: ::
XP_011 FLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVR--IPSRIPRYI
250 260 270 280
310 320
pF1KE4 PSLQAWNDAPCDKTFLFICKRPYVPSEP
>>XP_016882280 (OMIM: 616838) PREDICTED: C-type lectin d (243 aa)
initn: 358 init1: 141 opt: 339 Z-score: 362.3 bits: 74.9 E(85289): 1.9e-13
Smith-Waterman score: 339; 39.7% identity (65.9% similar) in 126 aa overlap (197-321:121-239)
170 180 190 200 210 220
pF1KE4 LNTKIRALQGSLENMSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSR
.:: :.:. :::: :.: :..::
XP_016 KHDIARVRADTNQSLVELWGLLDCRRITCPEGWLPFEGKCYYFSPSTKSWDEARMFCQEN
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE4 NSHLTSVTSESEQEFLYKTAGG-LIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGE
:::. ..: .:..:. :. :. .::.::. ..:::: :.: .: . :: : :
XP_016 YSHLVIINSFAEHNFVAKAHGSPRVYWLGLNDRAQEGDWRWLDGSPV----TLSFWEPEE
160 170 180 190 200
290 300 310 320
pF1KE4 PNNAGNNEHCGNIKAPSLQAWNDAPCDKTFLFICKRPYVPSEP
::: ..: :.... . .::: : :: .::.:
XP_016 PNNI-HDEDCATMNKGG--TWNDLSCYKTTYWICERKCSC
210 220 230 240
>>XP_016882279 (OMIM: 616838) PREDICTED: C-type lectin d (293 aa)
initn: 361 init1: 141 opt: 339 Z-score: 361.3 bits: 75.0 E(85289): 2.2e-13
Smith-Waterman score: 346; 34.3% identity (58.6% similar) in 181 aa overlap (143-321:126-289)
120 130 140 150 160 170
pF1KE4 NESLGYVRSQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASA-LNTKI
.:. : : . :: :. .. : : ..
XP_016 LFLGCLGLTVTLIKYQELMEELRMLSFQQMTWRTNMTGMAGLAGLKHDIARVRADTNQSL
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE4 RALQGSLENMSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLT
: : :. .: . .:: :.:. :::: :.: :..:: :::.
XP_016 VELWGLLDC-----RRIT-----CPEGWLPFEGKCYYFSPSTKSWDEARMFCQENYSHLV
160 170 180 190 200
240 250 260 270 280 290
pF1KE4 SVTSESEQEFLYKTAGG-LIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAG
..: .:..:. :. :. .::.::. ..:::: :.: .: . :: : ::::
XP_016 IINSFAEHNFVAKAHGSPRVYWLGLNDRAQEGDWRWLDGSPV----TLSFWEPEEPNNI-
210 220 230 240 250 260
300 310 320
pF1KE4 NNEHCGNIKAPSLQAWNDAPCDKTFLFICKRPYVPSEP
..: :.... . .::: : :: .::.:
XP_016 HDEDCATMNKGG--TWNDLSCYKTTYWICERKCSC
270 280 290
>>NP_001191047 (OMIM: 616838) C-type lectin domain famil (378 aa)
initn: 361 init1: 141 opt: 340 Z-score: 361.0 bits: 75.3 E(85289): 2.3e-13
Smith-Waterman score: 348; 28.3% identity (51.5% similar) in 336 aa overlap (2-321:68-374)
10 20 30
pF1KE4 MTVEKEAPDAHFTVDKQNISLWPREPPPKSG
:.:.: : : .: . .. ::: :
NP_001 PKPGTMEEEEEDDDYENSTPPYKDLPPKPGTMEEEEEDD----DYENSTPPYKDLPPKPG
40 50 60 70 80 90
40 50 60 70 80
pF1KE4 PSLVPGKTP-----TVRAALICLTLVLVASVLLQAVLYPRFMGTISDVKTNVQLLKGRVD
: .: . : : . : : ... . : :: : . ... . .:
NP_001 SS-APPRPPRAAKETEKPPLPCKPRNMTG-LDLAAVTCPPPQLAVNLEPSPLQ------P
100 110 120 130 140
90 100 110 120 130 140
pF1KE4 NISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVRSQFLK-LKTSVEKANAQ-----IQIL
.... .. .: . . :: : : : :: : .: . : ...:
NP_001 SLAATPVPWLNQRSGGPGCCQKRWMVYLCLLVVTSLFLGCLGLTVTLIKYQELMEELRML
150 160 170 180 190 200
150 160 170 180 190
pF1KE4 T---RSWEEVSTLNAQIPELKSDLEKASA-LNTKIRALQGSLENMSKLLKRQNDILQVVS
. .:. : : . :: :. .. : : .. : : :. .: .
NP_001 SFQQMTWRTNMTGMAGLAGLKHDIARVRADTNQSLVELWGLLDC-----RRIT-----CP
210 220 230 240 250
200 210 220 230 240 250
pF1KE4 QGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGG-LIYWIGL
.:: :.:. :::: :.: :..:: :::. ..: .:..:. :. :. .::.::
NP_001 EGWLPFEGKCYYFSPSTKSWDEARMFCQENYSHLVIINSFAEHNFVAKAHGSPRVYWLGL
260 270 280 290 300 310
260 270 280 290 300 310
pF1KE4 TKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTF
. ..:::: :.: .: . :: : :::: ..: :.... . .::: : ::
NP_001 NDRAQEGDWRWLDGSPV----TLSFWEPEEPNNI-HDEDCATMNKGG--TWNDLSCYKTT
320 330 340 350 360
320
pF1KE4 LFICKRPYVPSEP
.::.:
NP_001 YWICERKCSC
370
>>XP_016882275 (OMIM: 616838) PREDICTED: C-type lectin d (310 aa)
initn: 361 init1: 141 opt: 339 Z-score: 361.0 bits: 75.0 E(85289): 2.3e-13
Smith-Waterman score: 346; 34.3% identity (58.6% similar) in 181 aa overlap (143-321:143-306)
120 130 140 150 160 170
pF1KE4 NESLGYVRSQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASA-LNTKI
.:. : : . :: :. .. : : ..
XP_016 LFLGCLGLTVTLIKYQELMEELRMLSFQQMTWRTNMTGMAGLAGLKHDIARVRADTNQSL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 RALQGSLENMSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLT
: : :. .: . .:: :.:. :::: :.: :..:: :::.
XP_016 VELWGLLDC-----RRIT-----CPEGWLPFEGKCYYFSPSTKSWDEARMFCQENYSHLV
180 190 200 210 220
240 250 260 270 280 290
pF1KE4 SVTSESEQEFLYKTAGG-LIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAG
..: .:..:. :. :. .::.::. ..:::: :.: .: . :: : ::::
XP_016 IINSFAEHNFVAKAHGSPRVYWLGLNDRAQEGDWRWLDGSPV----TLSFWEPEEPNNI-
230 240 250 260 270
300 310 320
pF1KE4 NNEHCGNIKAPSLQAWNDAPCDKTFLFICKRPYVPSEP
..: :.... . .::: : :: .::.:
XP_016 HDEDCATMNKGG--TWNDLSCYKTTYWICERKCSC
280 290 300 310
>>XP_016882274 (OMIM: 616838) PREDICTED: C-type lectin d (310 aa)
initn: 361 init1: 141 opt: 339 Z-score: 361.0 bits: 75.0 E(85289): 2.3e-13
Smith-Waterman score: 346; 34.3% identity (58.6% similar) in 181 aa overlap (143-321:143-306)
120 130 140 150 160 170
pF1KE4 NESLGYVRSQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASA-LNTKI
.:. : : . :: :. .. : : ..
XP_016 LFLGCLGLTVTLIKYQELMEELRMLSFQQMTWRTNMTGMAGLAGLKHDIARVRADTNQSL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 RALQGSLENMSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLT
: : :. .: . .:: :.:. :::: :.: :..:: :::.
XP_016 VELWGLLDC-----RRIT-----CPEGWLPFEGKCYYFSPSTKSWDEARMFCQENYSHLV
180 190 200 210 220
240 250 260 270 280 290
pF1KE4 SVTSESEQEFLYKTAGG-LIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAG
..: .:..:. :. :. .::.::. ..:::: :.: .: . :: : ::::
XP_016 IINSFAEHNFVAKAHGSPRVYWLGLNDRAQEGDWRWLDGSPV----TLSFWEPEEPNNI-
230 240 250 260 270
300 310 320
pF1KE4 NNEHCGNIKAPSLQAWNDAPCDKTFLFICKRPYVPSEP
..: :.... . .::: : :: .::.:
XP_016 HDEDCATMNKGG--TWNDLSCYKTTYWICERKCSC
280 290 300 310
>>XP_016882278 (OMIM: 616838) PREDICTED: C-type lectin d (310 aa)
initn: 361 init1: 141 opt: 339 Z-score: 361.0 bits: 75.0 E(85289): 2.3e-13
Smith-Waterman score: 346; 34.3% identity (58.6% similar) in 181 aa overlap (143-321:143-306)
120 130 140 150 160 170
pF1KE4 NESLGYVRSQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASA-LNTKI
.:. : : . :: :. .. : : ..
XP_016 LFLGCLGLTVTLIKYQELMEELRMLSFQQMTWRTNMTGMAGLAGLKHDIARVRADTNQSL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 RALQGSLENMSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLT
: : :. .: . .:: :.:. :::: :.: :..:: :::.
XP_016 VELWGLLDC-----RRIT-----CPEGWLPFEGKCYYFSPSTKSWDEARMFCQENYSHLV
180 190 200 210 220
240 250 260 270 280 290
pF1KE4 SVTSESEQEFLYKTAGG-LIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAG
..: .:..:. :. :. .::.::. ..:::: :.: .: . :: : ::::
XP_016 IINSFAEHNFVAKAHGSPRVYWLGLNDRAQEGDWRWLDGSPV----TLSFWEPEEPNNI-
230 240 250 260 270
300 310 320
pF1KE4 NNEHCGNIKAPSLQAWNDAPCDKTFLFICKRPYVPSEP
..: :.... . .::: : :: .::.:
XP_016 HDEDCATMNKGG--TWNDLSCYKTTYWICERKCSC
280 290 300 310
328 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 23:10:04 2016 done: Sat Nov 5 23:10:05 2016
Total Scan time: 6.890 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]