Result of FASTA (omim) for
pFN21AE4301
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4301, 297 aa
1>>>pF1KE4301 297 - 297 aa - 297 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7023+/-0.000389; mu= 13.5127+/- 0.024
mean_var=72.7958+/-14.206, 0's: 0 Z-trim(112.5): 64 B-trim: 116 in 1/52
Lambda= 0.150321
statistics sampled from 21324 (21397) to 21324 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.251), width: 16
Scan time: 6.500
The best scores are: opt bits E(85289)
NP_001290 (OMIM: 600806) calponin-1 isoform 1 [Hom ( 297) 2004 443.9 1.8e-124
XP_016881778 (OMIM: 600806) PREDICTED: calponin-1 ( 363) 1867 414.2 1.9e-115
XP_005259798 (OMIM: 600806) PREDICTED: calponin-1 ( 247) 1665 370.3 2.1e-102
NP_001295270 (OMIM: 600806) calponin-1 isoform 2 [ ( 247) 1665 370.3 2.1e-102
NP_001295271 (OMIM: 600806) calponin-1 isoform 2 [ ( 247) 1665 370.3 2.1e-102
NP_001830 (OMIM: 602374) calponin-3 isoform 1 [Hom ( 329) 1368 306.0 6.5e-83
NP_004359 (OMIM: 602373) calponin-2 isoform a [Hom ( 309) 1217 273.2 4.4e-73
XP_016855734 (OMIM: 602374) PREDICTED: calponin-3 ( 288) 1156 260.0 4e-69
NP_001272985 (OMIM: 602374) calponin-3 isoform 3 [ ( 288) 1156 260.0 4e-69
NP_958434 (OMIM: 602373) calponin-2 isoform b [Hom ( 270) 841 191.7 1.4e-48
NP_001272984 (OMIM: 602374) calponin-3 isoform 2 [ ( 283) 722 165.9 8.5e-41
NP_001290430 (OMIM: 602373) calponin-2 isoform d [ ( 330) 604 140.3 4.9e-33
NP_001290428 (OMIM: 602373) calponin-2 isoform c [ ( 298) 583 135.7 1.1e-31
NP_001264152 (OMIM: 604634) transgelin-2 isoform b ( 199) 385 92.7 6.3e-19
NP_003555 (OMIM: 604634) transgelin-2 isoform b [H ( 199) 385 92.7 6.3e-19
NP_001264153 (OMIM: 604634) transgelin-2 isoform a ( 220) 385 92.7 6.8e-19
NP_001008274 (OMIM: 607953) transgelin-3 [Homo sap ( 199) 373 90.1 3.8e-18
NP_037391 (OMIM: 607953) transgelin-3 [Homo sapien ( 199) 373 90.1 3.8e-18
NP_001008273 (OMIM: 607953) transgelin-3 [Homo sap ( 199) 373 90.1 3.8e-18
NP_001293009 (OMIM: 604362) LIM domain only protei (1631) 210 55.2 1e-06
NP_003177 (OMIM: 600818) transgelin [Homo sapiens] ( 201) 179 48.0 1.8e-05
NP_001001522 (OMIM: 600818) transgelin [Homo sapie ( 201) 179 48.0 1.8e-05
NP_005349 (OMIM: 604362) LIM domain only protein 7 (1349) 186 49.9 3.2e-05
XP_005262556 (OMIM: 300267,300436) PREDICTED: rho ( 727) 176 47.6 8.4e-05
XP_011529716 (OMIM: 300267,300436) PREDICTED: rho ( 773) 176 47.7 8.9e-05
NP_004831 (OMIM: 300267,300436) rho guanine nucleo ( 776) 176 47.7 8.9e-05
XP_011529715 (OMIM: 300267,300436) PREDICTED: rho ( 780) 176 47.7 8.9e-05
XP_011529714 (OMIM: 300267,300436) PREDICTED: rho ( 803) 176 47.7 9.2e-05
XP_016885464 (OMIM: 300267,300436) PREDICTED: rho ( 807) 176 47.7 9.2e-05
XP_016870602 (OMIM: 600428) PREDICTED: guanine nuc ( 620) 169 46.1 0.00021
NP_003362 (OMIM: 600428) guanine nucleotide exchan ( 839) 169 46.1 0.00027
XP_016870601 (OMIM: 600428) PREDICTED: guanine nuc ( 844) 169 46.2 0.00027
XP_016870600 (OMIM: 600428) PREDICTED: guanine nuc ( 867) 169 46.2 0.00028
XP_005272270 (OMIM: 600428) PREDICTED: guanine nuc ( 868) 169 46.2 0.00028
XP_016870599 (OMIM: 600428) PREDICTED: guanine nuc ( 873) 169 46.2 0.00028
NP_001127870 (OMIM: 600428) guanine nucleotide exc ( 878) 169 46.2 0.00028
XP_016870598 (OMIM: 600428) PREDICTED: guanine nuc ( 891) 169 46.2 0.00029
XP_016870597 (OMIM: 600428) PREDICTED: guanine nuc ( 896) 169 46.2 0.00029
XP_011519435 (OMIM: 605477) PREDICTED: rho guanine ( 504) 153 42.6 0.0019
NP_663788 (OMIM: 605477) rho guanine nucleotide ex ( 782) 153 42.7 0.0028
XP_016876303 (OMIM: 605477) PREDICTED: rho guanine ( 794) 153 42.7 0.0029
NP_001307781 (OMIM: 605477) rho guanine nucleotide ( 803) 153 42.7 0.0029
NP_001245136 (OMIM: 164875) proto-oncogene vav iso ( 813) 153 42.7 0.0029
XP_006720019 (OMIM: 605477) PREDICTED: rho guanine ( 815) 153 42.7 0.0029
XP_005259699 (OMIM: 164875) PREDICTED: proto-oncog ( 821) 153 42.7 0.003
NP_001245135 (OMIM: 164875) proto-oncogene vav iso ( 823) 153 42.7 0.003
NP_005419 (OMIM: 164875) proto-oncogene vav isofor ( 845) 153 42.7 0.003
XP_016875973 (OMIM: 610368) PREDICTED: leucine-ric ( 477) 149 41.7 0.0034
NP_001157685 (OMIM: 610368) leucine-rich repeat an ( 696) 149 41.8 0.0047
NP_055931 (OMIM: 610368) leucine-rich repeat and c ( 728) 149 41.8 0.0049
>>NP_001290 (OMIM: 600806) calponin-1 isoform 1 [Homo sa (297 aa)
initn: 2004 init1: 2004 opt: 2004 Z-score: 2355.7 bits: 443.9 E(85289): 1.8e-124
Smith-Waterman score: 2004; 100.0% identity (100.0% similar) in 297 aa overlap (1-297:1-297)
10 20 30 40 50 60
pF1KE4 MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 CEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 QSTLLALASMAKTKGNKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSTLLALASMAKTKGNKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 AYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDT
190 200 210 220 230 240
250 260 270 280 290
pF1KE4 LNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
250 260 270 280 290
>>XP_016881778 (OMIM: 600806) PREDICTED: calponin-1 isof (363 aa)
initn: 1867 init1: 1867 opt: 1867 Z-score: 2193.8 bits: 414.2 E(85289): 1.9e-115
Smith-Waterman score: 1867; 99.6% identity (100.0% similar) in 277 aa overlap (21-297:87-363)
10 20 30 40 50
pF1KE4 MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNF
.:::::::::::::::::::::::::::::
XP_016 GDTERQRCMTSTPLQASTQGHLLRHPSSLPELAQKYDHQREQELREWIEGVTGRRIGNNF
60 70 80 90 100 110
60 70 80 90 100 110
pF1KE4 MDGLKDGIILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEAND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDGLKDGIILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEAND
120 130 140 150 160 170
120 130 140 150 160 170
pF1KE4 LFENTNHTQVQSTLLALASMAKTKGNKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFENTNHTQVQSTLLALASMAKTKGNKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGT
180 190 200 210 220 230
180 190 200 210 220 230
pF1KE4 NKFASQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKFASQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFE
240 250 260 270 280 290
240 250 260 270 280 290
pF1KE4 PGLGMEHCDTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGLGMEHCDTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHA
300 310 320 330 340 350
pF1KE4 HNYYNSA
:::::::
XP_016 HNYYNSA
360
>>XP_005259798 (OMIM: 600806) PREDICTED: calponin-1 isof (247 aa)
initn: 1665 init1: 1665 opt: 1665 Z-score: 1959.6 bits: 370.3 E(85289): 2.1e-102
Smith-Waterman score: 1665; 100.0% identity (100.0% similar) in 247 aa overlap (51-297:1-247)
30 40 50 60 70 80
pF1KE4 KLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKINESTQ
::::::::::::::::::::::::::::::
XP_005 MDGLKDGIILCEFINKLQPGSVKKINESTQ
10 20 30
90 100 110 120 130 140
pF1KE4 NWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNV
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE4 GVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE4 QATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTV
160 170 180 190 200 210
270 280 290
pF1KE4 YGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
:::::::::::::::::::::::::::::::::::::
XP_005 YGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
220 230 240
>>NP_001295270 (OMIM: 600806) calponin-1 isoform 2 [Homo (247 aa)
initn: 1665 init1: 1665 opt: 1665 Z-score: 1959.6 bits: 370.3 E(85289): 2.1e-102
Smith-Waterman score: 1665; 100.0% identity (100.0% similar) in 247 aa overlap (51-297:1-247)
30 40 50 60 70 80
pF1KE4 KLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKINESTQ
::::::::::::::::::::::::::::::
NP_001 MDGLKDGIILCEFINKLQPGSVKKINESTQ
10 20 30
90 100 110 120 130 140
pF1KE4 NWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNV
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE4 GVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE4 QATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTV
160 170 180 190 200 210
270 280 290
pF1KE4 YGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
:::::::::::::::::::::::::::::::::::::
NP_001 YGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
220 230 240
>>NP_001295271 (OMIM: 600806) calponin-1 isoform 2 [Homo (247 aa)
initn: 1665 init1: 1665 opt: 1665 Z-score: 1959.6 bits: 370.3 E(85289): 2.1e-102
Smith-Waterman score: 1665; 100.0% identity (100.0% similar) in 247 aa overlap (51-297:1-247)
30 40 50 60 70 80
pF1KE4 KLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKINESTQ
::::::::::::::::::::::::::::::
NP_001 MDGLKDGIILCEFINKLQPGSVKKINESTQ
10 20 30
90 100 110 120 130 140
pF1KE4 NWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNV
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE4 GVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE4 QATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTV
160 170 180 190 200 210
270 280 290
pF1KE4 YGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
:::::::::::::::::::::::::::::::::::::
NP_001 YGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
220 230 240
>>NP_001830 (OMIM: 602374) calponin-3 isoform 1 [Homo sa (329 aa)
initn: 1628 init1: 696 opt: 1368 Z-score: 1609.6 bits: 306.0 E(85289): 6.5e-83
Smith-Waterman score: 1368; 72.6% identity (88.1% similar) in 277 aa overlap (5-279:3-279)
10 20 30 40 50 60
pF1KE4 MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIIL
:::.::.::::::::::.:.::::: :..::.::: ::: :: ::. ::::::::
NP_001 MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEEVTGMSIGPNFQLGLKDGIIL
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 CEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQV
::.:::::::::::.:::. :: :::::::::::: ::.:::::::::::::: : :::
NP_001 CELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQV
60 70 80 90 100 110
130 140 150 160 170
pF1KE4 QSTLLALASMAKTKG--NKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQG
:.::.:::..::::: . ...:::::::: :.:. :::. :...::::::::: ::: :
NP_001 QTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 MTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHC
::::::::::::::. ::.:.::.::::::::::::::::: ::::.:.:.. : ..
NP_001 MTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE4 DTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
:. ..:::::.:: :::.::.:::: ::::::::: .: :
NP_001 DNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDS
240 250 260 270 280 290
NP_001 DYQAEYPDEYHGEYQDDYPRDYQYSDQGIDY
300 310 320
>>NP_004359 (OMIM: 602373) calponin-2 isoform a [Homo sa (309 aa)
initn: 1401 init1: 636 opt: 1217 Z-score: 1433.0 bits: 273.2 E(85289): 4.4e-73
Smith-Waterman score: 1217; 65.8% identity (85.8% similar) in 275 aa overlap (1-273:1-274)
10 20 30 40 50 60
pF1KE4 MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIIL
:::..::.::.:::::::::.: .::: :.: ::: ::::.:: :: .:. ::::: ::
NP_004 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 CEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQV
: ..:::::::: :::.: ::::::::..:::::...::..: :.::::::::. : :::
NP_004 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
70 80 90 100 110 120
130 140 150 160 170
pF1KE4 QSTLLALASMAKTKG--NKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQG
: .:::::. ::::: . :..::::.:::::.:. . .. :. .::::::::: :::.:
NP_004 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 MTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHC
:::::::::::::: :.:..:::::::::: :::.:::::::.:.:.. :: ..:
NP_004 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE4 DTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
:. ..::::: ..::.: :. :.:: ::.::::::
NP_004 DNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEY
250 260 270 280 290
NP_004 PPYYQEEAGY
300
>>XP_016855734 (OMIM: 602374) PREDICTED: calponin-3 isof (288 aa)
initn: 1416 init1: 690 opt: 1156 Z-score: 1362.0 bits: 260.0 E(85289): 4e-69
Smith-Waterman score: 1156; 72.5% identity (87.7% similar) in 236 aa overlap (46-279:3-238)
20 30 40 50 60 70
pF1KE4 AEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKI
:: ::. ::::::::::.:::::::::::.
XP_016 MSIGPNFQLGLKDGIILCELINKLQPGSVKKV
10 20 30
80 90 100 110 120 130
pF1KE4 NESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKG
:::. :: :::::::::::: ::.:::::::::::::: : ::::.::.:::..:::::
XP_016 NESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKG
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE4 --NKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKL
. ...:::::::: :.:. :::. :...::::::::: ::: :::::::::::::::.
XP_016 FHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKM
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE4 GTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGA
::.:.::.::::::::::::::::: ::::.:.:.. : .. :. ..:::::.:: :
XP_016 QTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVA
160 170 180 190 200 210
260 270 280 290
pF1KE4 SQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
::.::.:::: ::::::::: .: :
XP_016 SQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYQ
220 230 240 250 260 270
>>NP_001272985 (OMIM: 602374) calponin-3 isoform 3 [Homo (288 aa)
initn: 1416 init1: 690 opt: 1156 Z-score: 1362.0 bits: 260.0 E(85289): 4e-69
Smith-Waterman score: 1156; 72.5% identity (87.7% similar) in 236 aa overlap (46-279:3-238)
20 30 40 50 60 70
pF1KE4 AEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKI
:: ::. ::::::::::.:::::::::::.
NP_001 MSIGPNFQLGLKDGIILCELINKLQPGSVKKV
10 20 30
80 90 100 110 120 130
pF1KE4 NESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKG
:::. :: :::::::::::: ::.:::::::::::::: : ::::.::.:::..:::::
NP_001 NESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKG
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE4 --NKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKL
. ...:::::::: :.:. :::. :...::::::::: ::: :::::::::::::::.
NP_001 FHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKM
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE4 GTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGA
::.:.::.::::::::::::::::: ::::.:.:.. : .. :. ..:::::.:: :
NP_001 QTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVA
160 170 180 190 200 210
260 270 280 290
pF1KE4 SQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
::.::.:::: ::::::::: .: :
NP_001 SQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYQ
220 230 240 250 260 270
>>NP_958434 (OMIM: 602373) calponin-2 isoform b [Homo sa (270 aa)
initn: 1289 init1: 604 opt: 841 Z-score: 993.2 bits: 191.7 E(85289): 1.4e-48
Smith-Waterman score: 1004; 59.3% identity (75.1% similar) in 273 aa overlap (1-273:1-235)
10 20 30 40 50 60
pF1KE4 MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIIL
:::..::.::.:::::::::.: .::: :.: ::: ::::.:: :: .:. ::::: ::
NP_958 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 CEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQV
: ..:::::::: :::.: ::::::::..:::::...::..: :.::::::::. : :::
NP_958 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 QSTLLALASMAKTKGNKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMT
: .::::: :: ::::: :::.:::
NP_958 QVSLLALA--------------------------GK-----------MGTNKCASQSGMT
130 140
190 200 210 220 230 240
pF1KE4 AYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDT
:::::::::::: :.:..:::::::::: :::.:::::::.:.:.. :: ..::.
NP_958 AYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKCDN
150 160 170 180 190 200
250 260 270 280 290
pF1KE4 LNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
..::::: ..::.: :. :.:: ::.::::::
NP_958 SSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYPP
210 220 230 240 250 260
NP_958 YYQEEAGY
270
297 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 23:31:02 2016 done: Sat Nov 5 23:31:03 2016
Total Scan time: 6.500 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]