Result of FASTA (ccds) for
pFN21AE4296
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4296, 3140 aa
1>>>pF1KE4296 3140 - 3140 aa - 3140 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.4438+/-0.00152; mu= -7.9454+/- 0.093
mean_var=598.0238+/-119.537, 0's: 0 Z-trim(112.0): 36 B-trim: 43 in 1/53
Lambda= 0.052446
statistics sampled from 12820 (12834) to 12820 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.394), width: 16
Scan time: 11.200
The best scores are: opt bits E(32554)
CCDS43206.1 HTT gene_id:3064|Hs108|chr4 (3142) 20552 1572.9 0
>>CCDS43206.1 HTT gene_id:3064|Hs108|chr4 (3142 aa)
initn: 20466 init1: 20466 opt: 20552 Z-score: 8420.4 bits: 1572.9 E(32554): 0
Smith-Waterman score: 20552; 99.9% identity (99.9% similar) in 3142 aa overlap (1-3140:1-3142)
10 20 30 40 50
pF1KE4 MATLEKLMKAFESLKSFQQQQQQQQQQQQQQQQQQQ--PPPPPPPPPPPQLPQPPPQAQP
:::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS43 MATLEKLMKAFESLKSFQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE4 LLPQPQPPPPPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSVRNSPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LLPQPQPPPPPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSVRNSPE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 FQKLLGIAMELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FQKLLGIAMELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAP
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 RSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRTSKRPEESVQETLAAAVPKIMASFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRTSKRPEESVQETLAAAVPKIMASFG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE4 NFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLV
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE4 PVEDEHSTLLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSAEQLVQVYEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PVEDEHSTLLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSAEQLVQVYEL
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE4 TLHHTQHQDHNVVTGALELLQQLFRTPPPELLQTLTAVGGIGQLTAAKEESGGRSRSGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TLHHTQHQDHNVVTGALELLQQLFRTPPPELLQTLTAVGGIGQLTAAKEESGGRSRSGSI
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE4 VELIAGGGSSCSPVLSRKQKGKVLLGEEEALEDDSESRSDVSSSALTASVKDEISGELAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VELIAGGGSSCSPVLSRKQKGKVLLGEEEALEDDSESRSDVSSSALTASVKDEISGELAA
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE4 SSGVSTPGSAGHDIITEQPRSQHTLQADSVDLASCDLTSSATDGDEEDILSHSSSQVSAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SSGVSTPGSAGHDIITEQPRSQHTLQADSVDLASCDLTSSATDGDEEDILSHSSSQVSAV
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE4 PSDPAMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGTDNQYLGLQIGQPQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PSDPAMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGTDNQYLGLQIGQPQD
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE4 EDEEATGILPDEASEAFRNSSMALQQAHLLKNMSHCRQPSDSSVDKFVLRDEATEPGDQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EDEEATGILPDEASEAFRNSSMALQQAHLLKNMSHCRQPSDSSVDKFVLRDEATEPGDQE
610 620 630 640 650 660
660 670 680 690 700 710
pF1KE4 NKPCRIKGDIGQSTDDDSAPLVHCVRLLSASFLLTGGKNVLVPDRDVRVSVKALALSCVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NKPCRIKGDIGQSTDDDSAPLVHCVRLLSASFLLTGGKNVLVPDRDVRVSVKALALSCVG
670 680 690 700 710 720
720 730 740 750 760 770
pF1KE4 AAVALHPESFFSKLYKVPLDTTEYPEEQYVSDILNYIDHGDPQVRGATAILCGTLICSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AAVALHPESFFSKLYKVPLDTTEYPEEQYVSDILNYIDHGDPQVRGATAILCGTLICSIL
730 740 750 760 770 780
780 790 800 810 820 830
pF1KE4 SRSRFHVGDWMGTIRTLTGNTFSLADCIPLLRKTLKDESSVTCKLACTAVRNCVMSLCSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SRSRFHVGDWMGTIRTLTGNTFSLADCIPLLRKTLKDESSVTCKLACTAVRNCVMSLCSS
790 800 810 820 830 840
840 850 860 870 880 890
pF1KE4 SYSELGLQLIIDVLTLRNSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SYSELGLQLIIDVLTLRNSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGL
850 860 870 880 890 900
900 910 920 930 940 950
pF1KE4 LKLQERVLNNVVIHLLGDEDPRVRHVAAASLIRLVPKLFYKCDQGQADPVVAVARDQSSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LKLQERVLNNVVIHLLGDEDPRVRHVAAASLIRLVPKLFYKCDQGQADPVVAVARDQSSV
910 920 930 940 950 960
960 970 980 990 1000 1010
pF1KE4 YLKLLMHETQPPSHFSVSTITRIYRGYNLLPSITDVTMENNLSRVIAAVSHELITSTTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YLKLLMHETQPPSHFSVSTITRIYRGYNLLPSITDVTMENNLSRVIAAVSHELITSTTRA
970 980 990 1000 1010 1020
1020 1030 1040 1050 1060 1070
pF1KE4 LTFGCCEALCLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMATMILTLLSSAWFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LTFGCCEALCLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMATMILTLLSSAWFP
1030 1040 1050 1060 1070 1080
1080 1090 1100 1110 1120 1130
pF1KE4 LDLSAHQDALILAGNLLAASAPKSLRSSWASEEEANPAATKQEEVWPALGDRALVPMVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LDLSAHQDALILAGNLLAASAPKSLRSSWASEEEANPAATKQEEVWPALGDRALVPMVEQ
1090 1100 1110 1120 1130 1140
1140 1150 1160 1170 1180 1190
pF1KE4 LFSHLLKVINICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LFSHLLKVINICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPLSP
1150 1160 1170 1180 1190 1200
1200 1210 1220 1230 1240 1250
pF1KE4 KKGSEASAASRQSDTSGPVTTSKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KKGSEASAASRQSDTSGPVTTSKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNST
1210 1220 1230 1240 1250 1260
1260 1270 1280 1290 1300 1310
pF1KE4 EKFGGFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EKFGGFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLF
1270 1280 1290 1300 1310 1320
1320 1330 1340 1350 1360 1370
pF1KE4 GTNLASQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GTNLASQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQ
1330 1340 1350 1360 1370 1380
1380 1390 1400 1410 1420 1430
pF1KE4 AEQENDTSGWFDVLQKVSTQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AEQENDTSGWFDVLQKVSTQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTT
1390 1400 1410 1420 1430 1440
1440 1450 1460 1470 1480 1490
pF1KE4 CVQLQKQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CVQLQKQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFF
1450 1460 1470 1480 1490 1500
1500 1510 1520 1530 1540 1550
pF1KE4 LVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADA
1510 1520 1530 1540 1550 1560
1560 1570 1580 1590 1600 1610
pF1KE4 GKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAK
1570 1580 1590 1600 1610 1620
1620 1630 1640 1650 1660 1670
pF1KE4 QQMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPNTMASVSTVQLWISGILAIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QQMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPNTMASVSTVQLWISGILAIL
1630 1640 1650 1660 1670 1680
1680 1690 1700 1710 1720 1730
pF1KE4 RVLISQSTEDIVLSRIQELSFSPYLISCTVINRLRDGDSTSTLEEHSEGKQIKNLPEETF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RVLISQSTEDIVLSRIQELSFSPYLISCTVINRLRDGDSTSTLEEHSEGKQIKNLPEETF
1690 1700 1710 1720 1730 1740
1740 1750 1760 1770 1780 1790
pF1KE4 SRFLLQLVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SRFLLQLVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAAT
1750 1760 1770 1780 1790 1800
1800 1810 1820 1830 1840 1850
pF1KE4 RLFRSDGCGGSFYTLDSLNLRARSMITTHPALVLLWCQILLLVNHTDYRWWAEVQQTPKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RLFRSDGCGGSFYTLDSLNLRARSMITTHPALVLLWCQILLLVNHTDYRWWAEVQQTPKR
1810 1820 1830 1840 1850 1860
1860 1870 1880 1890 1900 1910
pF1KE4 HSLSSTKLLSPQMSGEEEDSDLAAKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HSLSSTKLLSPQMSGEEEDSDLAAKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLI
1870 1880 1890 1900 1910 1920
1920 1930 1940 1950 1960 1970
pF1KE4 VNHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTMLKKTLQCLEGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VNHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTMLKKTLQCLEGI
1930 1940 1950 1960 1970 1980
1980 1990 2000 2010 2020 2030
pF1KE4 HLSQSGAVLTLYVDRLLCTPFRVLARMVDILACRRVEMLLAANLQSSMAQLPMEELNRIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HLSQSGAVLTLYVDRLLCTPFRVLARMVDILACRRVEMLLAANLQSSMAQLPMEELNRIQ
1990 2000 2010 2020 2030 2040
2040 2050 2060 2070 2080 2090
pF1KE4 EYLQSSGLAQRHQRLYSLLDRFRLSTMQDSLSPSPPVSSHPLDGDGHVSLETVSPDKDWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EYLQSSGLAQRHQRLYSLLDRFRLSTMQDSLSPSPPVSSHPLDGDGHVSLETVSPDKDWY
2050 2060 2070 2080 2090 2100
2100 2110 2120 2130 2140 2150
pF1KE4 VHLVKSQCWTRSDSALLEGAELVNRIPAEDMNAFMMNSEFNLSLLAPCLSLGMSEISGGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VHLVKSQCWTRSDSALLEGAELVNRIPAEDMNAFMMNSEFNLSLLAPCLSLGMSEISGGQ
2110 2120 2130 2140 2150 2160
2160 2170 2180 2190 2200 2210
pF1KE4 KSALFEAAREVTLARVSGTVQQLPAVHHVFQPELPAEPAAYWSKLNDLFGDAALYQSLPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KSALFEAAREVTLARVSGTVQQLPAVHHVFQPELPAEPAAYWSKLNDLFGDAALYQSLPT
2170 2180 2190 2200 2210 2220
2220 2230 2240 2250 2260 2270
pF1KE4 LARALAQYLVVVSKLPSHLHLPPEKEKDIVKFVVATLEALSWHLIHEQIPLSLDLQAGLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LARALAQYLVVVSKLPSHLHLPPEKEKDIVKFVVATLEALSWHLIHEQIPLSLDLQAGLD
2230 2240 2250 2260 2270 2280
2280 2290 2300 2310 2320 2330
pF1KE4 CCCLALQLPGLWSVVSSTEFVTHACSLIHCVHFILEAVAVQPGEQLLSPERRTNTPKAIS
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
CCDS43 CCCLALQLPGLWSVVSSTEFVTHACSLIYCVHFILEAVAVQPGEQLLSPERRTNTPKAIS
2290 2300 2310 2320 2330 2340
2340 2350 2360 2370 2380 2390
pF1KE4 EEEEEVDPNTQNPKYITAACEMVAEMVESLQSVLALGHKRNSGVPAFLTPLLRNIIISLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EEEEEVDPNTQNPKYITAACEMVAEMVESLQSVLALGHKRNSGVPAFLTPLLRNIIISLA
2350 2360 2370 2380 2390 2400
2400 2410 2420 2430 2440 2450
pF1KE4 RLPLVNSYTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RLPLVNSYTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTS
2410 2420 2430 2440 2450 2460
2460 2470 2480 2490 2500 2510
pF1KE4 RTQFEETWATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RTQFEETWATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAG
2470 2480 2490 2500 2510 2520
2520 2530 2540 2550 2560 2570
pF1KE4 NPAVSCLEQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENIATHHLYQAWDPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NPAVSCLEQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENIATHHLYQAWDPV
2530 2540 2550 2560 2570 2580
2580 2590 2600 2610 2620 2630
pF1KE4 PSLSPATTGALISHEKLLLQINPERELGSMSYKLGQVSIHSVWLGNSITPLREEEWDEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PSLSPATTGALISHEKLLLQINPERELGSMSYKLGQVSIHSVWLGNSITPLREEEWDEEE
2590 2600 2610 2620 2630 2640
2640 2650 2660 2670 2680 2690
pF1KE4 EEEADAPAPSSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSSSARRTPAILISEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EEEADAPAPSSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSSSARRTPAILISEV
2650 2660 2670 2680 2690 2700
2700 2710 2720 2730 2740 2750
pF1KE4 VRSLLVVSDLFTERNQFELMYVTLTELRRVHPSEDEILAQYLVPATCKAAAVLGMDKAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VRSLLVVSDLFTERNQFELMYVTLTELRRVHPSEDEILAQYLVPATCKAAAVLGMDKAVA
2710 2720 2730 2740 2750 2760
2760 2770 2780 2790 2800 2810
pF1KE4 EPVSRLLESTLRSSHLPSRVGALHGILYVLECDLLDDTAKQLIPVISDYLLSNLKGIAHC
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
CCDS43 EPVSRLLESTLRSSHLPSRVGALHGVLYVLECDLLDDTAKQLIPVISDYLLSNLKGIAHC
2770 2780 2790 2800 2810 2820
2820 2830 2840 2850 2860 2870
pF1KE4 VNIHSQQHVLVMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHCALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VNIHSQQHVLVMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHCALR
2830 2840 2850 2860 2870 2880
2880 2890 2900 2910 2920 2930
pF1KE4 GLERLLLSEQLSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKVSPGRTSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GLERLLLSEQLSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKVSPGRTSD
2890 2900 2910 2920 2930 2940
2940 2950 2960 2970 2980 2990
pF1KE4 PNPAAPDSESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDIMNKVIGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PNPAAPDSESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDIMNKVIGE
2950 2960 2970 2980 2990 3000
3000 3010 3020 3030 3040 3050
pF1KE4 FLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRAPVAMATWSLSCFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRAPVAMATWSLSCFF
3010 3020 3030 3040 3050 3060
3060 3070 3080 3090 3100 3110
pF1KE4 VSASTSPWVAAILPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVLEVVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VSASTSPWVAAILPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVLEVVA
3070 3080 3090 3100 3110 3120
3120 3130 3140
pF1KE4 APGSPYHRLLTCLRNVHKVTTC
::::::::::::::::::::::
CCDS43 APGSPYHRLLTCLRNVHKVTTC
3130 3140
3140 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 20:43:46 2016 done: Mon Nov 7 20:43:48 2016
Total Scan time: 11.200 Total Display time: 0.500
Function used was FASTA [36.3.4 Apr, 2011]