Result of FASTA (omim) for
pFN21AE4204
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4204, 711 aa
1>>>pF1KE4204 711 - 711 aa - 711 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4252+/-0.000353; mu= 15.2622+/- 0.022
mean_var=105.5485+/-20.833, 0's: 0 Z-trim(116.7): 27 B-trim: 108 in 1/50
Lambda= 0.124838
statistics sampled from 28003 (28030) to 28003 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.329), width: 16
Scan time: 10.690
The best scores are: opt bits E(85289)
XP_005267848 (OMIM: 609104) PREDICTED: F-box only ( 711) 4863 886.9 0
XP_006720248 (OMIM: 609104) PREDICTED: F-box only ( 711) 4863 886.9 0
NP_689417 (OMIM: 609104) F-box only protein 34 [Ho ( 711) 4863 886.9 0
XP_016876882 (OMIM: 609104) PREDICTED: F-box only ( 711) 4863 886.9 0
NP_060413 (OMIM: 609104) F-box only protein 34 [Ho ( 711) 4863 886.9 0
XP_016876881 (OMIM: 609104) PREDICTED: F-box only ( 711) 4863 886.9 0
XP_016876880 (OMIM: 609104) PREDICTED: F-box only ( 715) 4863 886.9 0
NP_001316563 (OMIM: 609117) F-box only protein 46 ( 603) 762 148.2 8.7e-35
NP_001316562 (OMIM: 609117) F-box only protein 46 ( 603) 762 148.2 8.7e-35
NP_001073938 (OMIM: 609117) F-box only protein 46 ( 603) 762 148.2 8.7e-35
NP_001316561 (OMIM: 609117) F-box only protein 46 ( 603) 762 148.2 8.7e-35
>>XP_005267848 (OMIM: 609104) PREDICTED: F-box only prot (711 aa)
initn: 4863 init1: 4863 opt: 4863 Z-score: 4736.2 bits: 886.9 E(85289): 0
Smith-Waterman score: 4863; 99.7% identity (99.7% similar) in 711 aa overlap (1-711:1-711)
10 20 30 40 50 60
pF1KE4 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSNLNSCEDPVPG
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
XP_005 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSILNSCEDPVPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPASSVES
:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_005 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVLPASSVES
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
610 620 630 640 650 660
670 680 690 700 710
pF1KE4 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
670 680 690 700 710
>>XP_006720248 (OMIM: 609104) PREDICTED: F-box only prot (711 aa)
initn: 4863 init1: 4863 opt: 4863 Z-score: 4736.2 bits: 886.9 E(85289): 0
Smith-Waterman score: 4863; 99.7% identity (99.7% similar) in 711 aa overlap (1-711:1-711)
10 20 30 40 50 60
pF1KE4 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSNLNSCEDPVPG
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
XP_006 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSILNSCEDPVPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPASSVES
:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_006 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVLPASSVES
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
610 620 630 640 650 660
670 680 690 700 710
pF1KE4 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
670 680 690 700 710
>>NP_689417 (OMIM: 609104) F-box only protein 34 [Homo s (711 aa)
initn: 4863 init1: 4863 opt: 4863 Z-score: 4736.2 bits: 886.9 E(85289): 0
Smith-Waterman score: 4863; 99.7% identity (99.7% similar) in 711 aa overlap (1-711:1-711)
10 20 30 40 50 60
pF1KE4 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSNLNSCEDPVPG
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
NP_689 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSILNSCEDPVPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPASSVES
:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
NP_689 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVLPASSVES
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
610 620 630 640 650 660
670 680 690 700 710
pF1KE4 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
670 680 690 700 710
>>XP_016876882 (OMIM: 609104) PREDICTED: F-box only prot (711 aa)
initn: 4863 init1: 4863 opt: 4863 Z-score: 4736.2 bits: 886.9 E(85289): 0
Smith-Waterman score: 4863; 99.7% identity (99.7% similar) in 711 aa overlap (1-711:1-711)
10 20 30 40 50 60
pF1KE4 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSNLNSCEDPVPG
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
XP_016 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSILNSCEDPVPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPASSVES
:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_016 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVLPASSVES
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
610 620 630 640 650 660
670 680 690 700 710
pF1KE4 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
670 680 690 700 710
>>NP_060413 (OMIM: 609104) F-box only protein 34 [Homo s (711 aa)
initn: 4863 init1: 4863 opt: 4863 Z-score: 4736.2 bits: 886.9 E(85289): 0
Smith-Waterman score: 4863; 99.7% identity (99.7% similar) in 711 aa overlap (1-711:1-711)
10 20 30 40 50 60
pF1KE4 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSNLNSCEDPVPG
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
NP_060 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSILNSCEDPVPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPASSVES
:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
NP_060 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVLPASSVES
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
610 620 630 640 650 660
670 680 690 700 710
pF1KE4 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
670 680 690 700 710
>>XP_016876881 (OMIM: 609104) PREDICTED: F-box only prot (711 aa)
initn: 4863 init1: 4863 opt: 4863 Z-score: 4736.2 bits: 886.9 E(85289): 0
Smith-Waterman score: 4863; 99.7% identity (99.7% similar) in 711 aa overlap (1-711:1-711)
10 20 30 40 50 60
pF1KE4 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSNLNSCEDPVPG
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
XP_016 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSILNSCEDPVPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPASSVES
:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
XP_016 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVLPASSVES
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY
610 620 630 640 650 660
670 680 690 700 710
pF1KE4 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
670 680 690 700 710
>>XP_016876880 (OMIM: 609104) PREDICTED: F-box only prot (715 aa)
initn: 4863 init1: 4863 opt: 4863 Z-score: 4736.2 bits: 886.9 E(85289): 0
Smith-Waterman score: 4863; 99.7% identity (99.7% similar) in 711 aa overlap (1-711:5-715)
10 20 30 40 50
pF1KE4 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGFVMHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE4 SSRKPFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSRKPFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 KEKIAFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEKIAFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQ
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 PEPFACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEPFACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIV
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE4 RFSGQSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RFSGQSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQ
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE4 REPGSLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REPGSLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRAD
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE4 RCSPKEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RCSPKEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPF
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE4 SSHTYSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSNLNSCED
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
XP_016 SSHTYSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSILNSCED
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE4 PVPGMLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPAS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::
XP_016 PVPGMLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVLPAS
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE4 SVESTLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVESTLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLV
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE4 ALKCTCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALKCTCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQ
610 620 630 640 650 660
660 670 680 690 700 710
pF1KE4 ALPYGPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALPYGPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
670 680 690 700 710
>>NP_001316563 (OMIM: 609117) F-box only protein 46 [Hom (603 aa)
initn: 1014 init1: 747 opt: 762 Z-score: 745.5 bits: 148.2 E(85289): 8.7e-35
Smith-Waterman score: 1011; 34.2% identity (54.7% similar) in 658 aa overlap (49-692:28-590)
20 30 40 50 60 70
pF1KE4 SRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRKPFGILSPNVLCSMSGKSP
:::.: .. .: : :. . : ..:
NP_001 MDRGSLLPFQLWCPRPFGTYSQNQPRPPSAALKPSACPEPGGGAEPDHGPAHSENTP
10 20 30 40 50
80 90 100 110 120 130
pF1KE4 VESSLNVKTKKNAPSATIHQGEEEGP--LDIWAVVKPGNTKEKIAFFASHQCS--NRIGS
. .: ... :: . . .:: :: : :.::::::::.:::..:::. .: .:
NP_001 PALATEVPASQPAPLLSAAAAGDEGRVLLDTWYVIKPGNTKEKVAFFVAHQCGGGSRASS
60 70 80 90 100 110
140 150 160 170 180 190
pF1KE4 MKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPFACGIEHCSVHYVSD
::.:. : :. .:::.. : :: :.: . . . ..
NP_001 MKVKGHWGSDSSKAKRRRRCLDPTKAP---------------PDPGGREGPPAAEEGPAS
120 130 140 150 160
200 210 220 230 240 250
pF1KE4 SGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSGQSRGVPAV---SES
.:. : ::: .:::..::::. : : . : :: : : . .: :: ::
NP_001 AGEDVDL---LSVAEMVALVEQRAALALQSYPRPTT--PAPVVFVSAEQGGPAKGVGSER
170 180 190 200 210
260 270 280 290 300 310
pF1KE4 YSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPGSLSRNNSFRRN
:. : : . .: .. .: :.. :..: .: : :: .:: .
NP_001 RSGGGDCSRVAEAVAHFEAQRDSPPTK------GLRKE--ERPG---PGPGEVRIAFRIS
220 230 240 250 260
320 330 340 350 360 370
pF1KE4 VGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCG-PSRADRCSPKEDQAWDGAS
:: : . :::. . :. :. :. . .:.
NP_001 NGR----------EPR-------APDSGLPSGGGGRPGCAYPGSPGPGARAKDKITCDLY
270 280 290 300
380 390 400 410 420
pF1KE4 QDCPP----LPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHTYSQASE
: : ::..: : . :. : .... .. : . : ::
NP_001 QLISPSRDALPSNVEFLLARAD------EASEGDSPAPARPEDTPPAPPPPPARDCGASG
310 320 330 340 350 360
430 440 450 460 470 480
pF1KE4 LPTDAVDCMSRELVSLTSRNPDQ--RKESLCISITVSKVDKDQPSNLNSCEDPVPGMLFF
. .:.: . . ... . ..:..:.... : : : ::.:::
NP_001 FHVDVVVTGVVDECIFFGKDGTKNVKEETVCLTVS--------PE-----EPPPPGQLFF
370 380 390 400 410
490 500 510 520 530 540
pF1KE4 LPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPASSVESTLPV
: .. . . : :.. : : :.: :.:. ..:
NP_001 L---------QNRGPDGPPEPPPADSPATAPGPDDAE----GTAD----------TSLCR
420 430 440
550 560 570 580 590 600
pF1KE4 LEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKCTCCY
: ..::::::: :::::.::::.::: .::.:..:::: .:::..:.:::::: .
NP_001 LY-----RHVSHDFLEIRFKIQRLLEPRQYMLLLPEHVLVKIFSFLPTRALAALKCTCHH
450 460 470 480 490 500
610 620 630 640 650 660
pF1KE4 FKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPYGPGY
:: ::: ...: .:::: ::: ::.::::::.:.: :::::::::::::: . :::: .:
NP_001 FKGIIEAFGVRATDSRWSRDPLYRDDPCKQCRKRYEKGDVSLCRWHPKPYHHDLPYGRSY
510 520 530 540 550 560
670 680 690 700 710
pF1KE4 WMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
::::.:... :::.::::::.:: :.
NP_001 WMCCRRADRETPGCRLGLHDNNWVLPCNGPGGGRAGREEGR
570 580 590 600
>>NP_001316562 (OMIM: 609117) F-box only protein 46 [Hom (603 aa)
initn: 1014 init1: 747 opt: 762 Z-score: 745.5 bits: 148.2 E(85289): 8.7e-35
Smith-Waterman score: 1011; 34.2% identity (54.7% similar) in 658 aa overlap (49-692:28-590)
20 30 40 50 60 70
pF1KE4 SRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRKPFGILSPNVLCSMSGKSP
:::.: .. .: : :. . : ..:
NP_001 MDRGSLLPFQLWCPRPFGTYSQNQPRPPSAALKPSACPEPGGGAEPDHGPAHSENTP
10 20 30 40 50
80 90 100 110 120 130
pF1KE4 VESSLNVKTKKNAPSATIHQGEEEGP--LDIWAVVKPGNTKEKIAFFASHQCS--NRIGS
. .: ... :: . . .:: :: : :.::::::::.:::..:::. .: .:
NP_001 PALATEVPASQPAPLLSAAAAGDEGRVLLDTWYVIKPGNTKEKVAFFVAHQCGGGSRASS
60 70 80 90 100 110
140 150 160 170 180 190
pF1KE4 MKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPFACGIEHCSVHYVSD
::.:. : :. .:::.. : :: :.: . . . ..
NP_001 MKVKGHWGSDSSKAKRRRRCLDPTKAP---------------PDPGGREGPPAAEEGPAS
120 130 140 150 160
200 210 220 230 240 250
pF1KE4 SGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSGQSRGVPAV---SES
.:. : ::: .:::..::::. : : . : :: : : . .: :: ::
NP_001 AGEDVDL---LSVAEMVALVEQRAALALQSYPRPTT--PAPVVFVSAEQGGPAKGVGSER
170 180 190 200 210
260 270 280 290 300 310
pF1KE4 YSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPGSLSRNNSFRRN
:. : : . .: .. .: :.. :..: .: : :: .:: .
NP_001 RSGGGDCSRVAEAVAHFEAQRDSPPTK------GLRKE--ERPG---PGPGEVRIAFRIS
220 230 240 250 260
320 330 340 350 360 370
pF1KE4 VGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCG-PSRADRCSPKEDQAWDGAS
:: : . :::. . :. :. :. . .:.
NP_001 NGR----------EPR-------APDSGLPSGGGGRPGCAYPGSPGPGARAKDKITCDLY
270 280 290 300
380 390 400 410 420
pF1KE4 QDCPP----LPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHTYSQASE
: : ::..: : . :. : .... .. : . : ::
NP_001 QLISPSRDALPSNVEFLLARAD------EASEGDSPAPARPEDTPPAPPPPPARDCGASG
310 320 330 340 350 360
430 440 450 460 470 480
pF1KE4 LPTDAVDCMSRELVSLTSRNPDQ--RKESLCISITVSKVDKDQPSNLNSCEDPVPGMLFF
. .:.: . . ... . ..:..:.... : : : ::.:::
NP_001 FHVDVVVTGVVDECIFFGKDGTKNVKEETVCLTVS--------PE-----EPPPPGQLFF
370 380 390 400 410
490 500 510 520 530 540
pF1KE4 LPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPASSVESTLPV
: .. . . : :.. : : :.: :.:. ..:
NP_001 L---------QNRGPDGPPEPPPADSPATAPGPDDAE----GTAD----------TSLCR
420 430 440
550 560 570 580 590 600
pF1KE4 LEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKCTCCY
: ..::::::: :::::.::::.::: .::.:..:::: .:::..:.:::::: .
NP_001 LY-----RHVSHDFLEIRFKIQRLLEPRQYMLLLPEHVLVKIFSFLPTRALAALKCTCHH
450 460 470 480 490 500
610 620 630 640 650 660
pF1KE4 FKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPYGPGY
:: ::: ...: .:::: ::: ::.::::::.:.: :::::::::::::: . :::: .:
NP_001 FKGIIEAFGVRATDSRWSRDPLYRDDPCKQCRKRYEKGDVSLCRWHPKPYHHDLPYGRSY
510 520 530 540 550 560
670 680 690 700 710
pF1KE4 WMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
::::.:... :::.::::::.:: :.
NP_001 WMCCRRADRETPGCRLGLHDNNWVLPCNGPGGGRAGREEGR
570 580 590 600
>>NP_001073938 (OMIM: 609117) F-box only protein 46 [Hom (603 aa)
initn: 1014 init1: 747 opt: 762 Z-score: 745.5 bits: 148.2 E(85289): 8.7e-35
Smith-Waterman score: 1011; 34.2% identity (54.7% similar) in 658 aa overlap (49-692:28-590)
20 30 40 50 60 70
pF1KE4 SRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRKPFGILSPNVLCSMSGKSP
:::.: .. .: : :. . : ..:
NP_001 MDRGSLLPFQLWCPRPFGTYSQNQPRPPSAALKPSACPEPGGGAEPDHGPAHSENTP
10 20 30 40 50
80 90 100 110 120 130
pF1KE4 VESSLNVKTKKNAPSATIHQGEEEGP--LDIWAVVKPGNTKEKIAFFASHQCS--NRIGS
. .: ... :: . . .:: :: : :.::::::::.:::..:::. .: .:
NP_001 PALATEVPASQPAPLLSAAAAGDEGRVLLDTWYVIKPGNTKEKVAFFVAHQCGGGSRASS
60 70 80 90 100 110
140 150 160 170 180 190
pF1KE4 MKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPFACGIEHCSVHYVSD
::.:. : :. .:::.. : :: :.: . . . ..
NP_001 MKVKGHWGSDSSKAKRRRRCLDPTKAP---------------PDPGGREGPPAAEEGPAS
120 130 140 150 160
200 210 220 230 240 250
pF1KE4 SGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSGQSRGVPAV---SES
.:. : ::: .:::..::::. : : . : :: : : . .: :: ::
NP_001 AGEDVDL---LSVAEMVALVEQRAALALQSYPRPTT--PAPVVFVSAEQGGPAKGVGSER
170 180 190 200 210
260 270 280 290 300 310
pF1KE4 YSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPGSLSRNNSFRRN
:. : : . .: .. .: :.. :..: .: : :: .:: .
NP_001 RSGGGDCSRVAEAVAHFEAQRDSPPTK------GLRKE--ERPG---PGPGEVRIAFRIS
220 230 240 250 260
320 330 340 350 360 370
pF1KE4 VGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCG-PSRADRCSPKEDQAWDGAS
:: : . :::. . :. :. :. . .:.
NP_001 NGR----------EPR-------APDSGLPSGGGGRPGCAYPGSPGPGARAKDKITCDLY
270 280 290 300
380 390 400 410 420
pF1KE4 QDCPP----LPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHTYSQASE
: : ::..: : . :. : .... .. : . : ::
NP_001 QLISPSRDALPSNVEFLLARAD------EASEGDSPAPARPEDTPPAPPPPPARDCGASG
310 320 330 340 350 360
430 440 450 460 470 480
pF1KE4 LPTDAVDCMSRELVSLTSRNPDQ--RKESLCISITVSKVDKDQPSNLNSCEDPVPGMLFF
. .:.: . . ... . ..:..:.... : : : ::.:::
NP_001 FHVDVVVTGVVDECIFFGKDGTKNVKEETVCLTVS--------PE-----EPPPPGQLFF
370 380 390 400 410
490 500 510 520 530 540
pF1KE4 LPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPASSVESTLPV
: .. . . : :.. : : :.: :.:. ..:
NP_001 L---------QNRGPDGPPEPPPADSPATAPGPDDAE----GTAD----------TSLCR
420 430 440
550 560 570 580 590 600
pF1KE4 LEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKCTCCY
: ..::::::: :::::.::::.::: .::.:..:::: .:::..:.:::::: .
NP_001 LY-----RHVSHDFLEIRFKIQRLLEPRQYMLLLPEHVLVKIFSFLPTRALAALKCTCHH
450 460 470 480 490 500
610 620 630 640 650 660
pF1KE4 FKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPYGPGY
:: ::: ...: .:::: ::: ::.::::::.:.: :::::::::::::: . :::: .:
NP_001 FKGIIEAFGVRATDSRWSRDPLYRDDPCKQCRKRYEKGDVSLCRWHPKPYHHDLPYGRSY
510 520 530 540 550 560
670 680 690 700 710
pF1KE4 WMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY
::::.:... :::.::::::.:: :.
NP_001 WMCCRRADRETPGCRLGLHDNNWVLPCNGPGGGRAGREEGR
570 580 590 600
711 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 01:30:20 2016 done: Sun Nov 6 01:30:22 2016
Total Scan time: 10.690 Total Display time: 0.210
Function used was FASTA [36.3.4 Apr, 2011]