Result of FASTA (ccds) for
pFN21AE4182
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4182, 727 aa
1>>>pF1KE4182 727 - 727 aa - 727 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9465+/-0.000896; mu= 12.6207+/- 0.054
mean_var=102.9935+/-20.645, 0's: 0 Z-trim(108.7): 21 B-trim: 0 in 0/51
Lambda= 0.126377
statistics sampled from 10392 (10405) to 10392 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.32), width: 16
Scan time: 4.220
The best scores are: opt bits E(32554)
CCDS7214.1 ZFAND4 gene_id:93550|Hs108|chr10 ( 727) 4866 898.0 0
CCDS60520.1 ZFAND4 gene_id:93550|Hs108|chr10 ( 653) 4340 802.1 0
>>CCDS7214.1 ZFAND4 gene_id:93550|Hs108|chr10 (727 aa)
initn: 4866 init1: 4866 opt: 4866 Z-score: 4796.1 bits: 898.0 E(32554): 0
Smith-Waterman score: 4866; 100.0% identity (100.0% similar) in 727 aa overlap (1-727:1-727)
10 20 30 40 50 60
pF1KE4 MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 EGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 EGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 EYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 EYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 KKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 KKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 TQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 TQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 SSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 SSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGAC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 KVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 KVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 MSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 MSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 ISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLST
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 NLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGECTTHHLPPVKAPLQTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 NLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGECTTHHLPPVKAPLQTK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE4 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVN
670 680 690 700 710 720
pF1KE4 APKLPKI
:::::::
CCDS72 APKLPKI
>>CCDS60520.1 ZFAND4 gene_id:93550|Hs108|chr10 (653 aa)
initn: 4340 init1: 4340 opt: 4340 Z-score: 4278.6 bits: 802.1 E(32554): 0
Smith-Waterman score: 4340; 100.0% identity (100.0% similar) in 653 aa overlap (75-727:1-653)
50 60 70 80 90 100
pF1KE4 SPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGP
::::::::::::::::::::::::::::::
CCDS60 MELENDYCLNDYNISEGCTLKLVLAMRGGP
10 20 30
110 120 130 140 150 160
pF1KE4 INTRRVPTDDPLRKMAEYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 INTRRVPTDDPLRKMAEYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE4 TPLSDSSKKIDFHLHVLRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 TPLSDSSKKIDFHLHVLRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKM
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE4 KLLKAKMKNMNLSKKPKKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 KLLKAKMKNMNLSKKPKKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFG
160 170 180 190 200 210
290 300 310 320 330 340
pF1KE4 NAYPPEISRNGISSLATQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 NAYPPEISRNGISSLATQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHL
220 230 240 250 260 270
350 360 370 380 390 400
pF1KE4 ELGNDQELADSVLHLGSSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 ELGNDQELADSVLHLGSSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASF
280 290 300 310 320 330
410 420 430 440 450 460
pF1KE4 AEGNADEQSSGLEGACKVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 AEGNADEQSSGLEGACKVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYREL
340 350 360 370 380 390
470 480 490 500 510 520
pF1KE4 SPHKNRLLSPLRCSAPMSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 SPHKNRLLSPLRCSAPMSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTT
400 410 420 430 440 450
530 540 550 560 570 580
pF1KE4 CFQGVKVDSLGKRSDVISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 CFQGVKVDSLGKRSDVISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQS
460 470 480 490 500 510
590 600 610 620 630 640
pF1KE4 TRGAGRLQNSGTGLSTNLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 TRGAGRLQNSGTGLSTNLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGE
520 530 540 550 560 570
650 660 670 680 690 700
pF1KE4 CTTHHLPPVKAPLQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 CTTHHLPPVKAPLQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDY
580 590 600 610 620 630
710 720
pF1KE4 KSAGRRYLHEANPVVNAPKLPKI
:::::::::::::::::::::::
CCDS60 KSAGRRYLHEANPVVNAPKLPKI
640 650
727 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 01:31:36 2016 done: Sun Nov 6 01:31:37 2016
Total Scan time: 4.220 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]