FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE4154, 589 aa
  1>>>pF1KE4154 589 - 589 aa - 589 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.4026+/-0.00119; mu= -4.1835+/- 0.069
 mean_var=440.8227+/-109.313, 0's: 0 Z-trim(113.1): 555  B-trim: 648 in 1/50
 Lambda= 0.061086
 statistics sampled from 12943 (13794) to 12943 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.424), width:  16
 Scan time:  4.140

The best scores are:                                      opt bits E(32554)
CCDS13538.1 ZBTB46 gene_id:140685|Hs108|chr20      ( 589) 3974 365.2 1.3e-100


>>CCDS13538.1 ZBTB46 gene_id:140685|Hs108|chr20           (589 aa)
 initn: 3974 init1: 3974 opt: 3974  Z-score: 1919.8  bits: 365.2 E(32554): 1.3e-100
Smith-Waterman score: 3974; 99.8% identity (100.0% similar) in 589 aa overlap (1-589:1-589)

               10        20        30        40        50        60
pF1KE4 MNNRKEDMEIASHYRHLLRELNEQRQHGVLCDVCVVVEGKVFKAHKNVLLGSSRYFKTLY
       ::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MNNRKEDMEITSHYRHLLRELNEQRQHGVLCDVCVVVEGKVFKAHKNVLLGSSRYFKTLY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 CQVQKTSEQATVTHLDIVTAQGFKAIIDFMYSAHLALTSRNVIEVMSAASFLQMTDIVQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 CQVQKTSEQATVTHLDIVTAQGFKAIIDFMYSAHLALTSRNVIEVMSAASFLQMTDIVQA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 CHDFIKAALDISIKSDASDELAEFEIGASSSSSTEALISAVMAGRSISPWLARRTSPANS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 CHDFIKAALDISIKSDASDELAEFEIGASSSSSTEALISAVMAGRSISPWLARRTSPANS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 SGDSAIASCHDGGSSYGKEDQEPKADGPDDVSSQPLWPGDVGYGPLRIKEEQVSPSQYGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SGDSAIASCHDGGSSYGKEDQEPKADGPDDVSSQPLWPGDVGYGPLRIKEEQVSPSQYGG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 SELPSAKDGAVQNSFSEQSAGDAWQPTGRRKNRKNKETVRHITQQVEDDSRASSPVPSFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SELPSAKDGAVQNSFSEQSAGDAWQPTGRRKNRKNKETVRHITQQVEDDSRASSPVPSFL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 PTSGWPFSSRDSNADLSVTEASSSDSRGERAELYAQVEEGLLGGEASYLGPPLTPEKDDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PTSGWPFSSRDSNADLSVTEASSSDSRGERAELYAQVEEGLLGGEASYLGPPLTPEKDDA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 LHQATAVANLRAALMSKNSLLSLKADVLGDDGSLLFEYLPRGAHSLSLNEFTVIRKKFKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LHQATAVANLRAALMSKNSLLSLKADVLGDDGSLLFEYLPRGAHSLSLNEFTVIRKKFKC
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE4 PYCSFSAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKYVCKVCS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PYCSFSAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKYVCKVCS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE4 RVFMSAASVGIRHGSRRHGVCTDCAGRGMAGPLDHGGGGGEGSPEALFPGDGPYLEDPED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RVFMSAASVGIRHGSRRHGVCTDCAGRGMAGPLDHGGGGGEGSPEALFPGDGPYLEDPED
              490       500       510       520       530       540

              550       560       570       580         
pF1KE4 PRGEAEELGEDDEGLAPEDALLADDKDEEDSPRPRSPPGGPDKDFAWLS
       :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PRGEAEELGEDDEGLAPEDALLADDKDEEDSPRPRSPPGGPDKDFAWLS
              550       560       570       580         




589 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 03:42:56 2016 done: Sun Nov  6 03:42:57 2016
 Total Scan time:  4.140 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]