Result of FASTA (ccds) for
pFN21AE4133
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4133, 538 aa
1>>>pF1KE4133 538 - 538 aa - 538 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4646+/-0.000658; mu= 15.0205+/- 0.040
mean_var=110.0382+/-22.021, 0's: 0 Z-trim(114.5): 7 B-trim: 183 in 1/50
Lambda= 0.122265
statistics sampled from 15078 (15082) to 15078 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.463), width: 16
Scan time: 4.230
The best scores are: opt bits E(32554)
CCDS9583.1 C14orf93 gene_id:60686|Hs108|chr14 ( 538) 3610 647.0 1.6e-185
CCDS61400.1 C14orf93 gene_id:60686|Hs108|chr14 ( 498) 2897 521.2 1.1e-147
CCDS61399.1 C14orf93 gene_id:60686|Hs108|chr14 ( 358) 2406 434.5 9.7e-122
>>CCDS9583.1 C14orf93 gene_id:60686|Hs108|chr14 (538 aa)
initn: 3610 init1: 3610 opt: 3610 Z-score: 3444.3 bits: 647.0 E(32554): 1.6e-185
Smith-Waterman score: 3610; 99.8% identity (100.0% similar) in 538 aa overlap (1-538:1-538)
10 20 30 40 50 60
pF1KE4 MSFSATILFSPPSGSEARCCCCACKSETNGGNTGSQGGNPPPSTPITVTGHGLAVQSSEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MSFSATILFSPPSGSEARCCCCACKSETNGGNTGSQGGNPPPSTPITVTGHGLAVQSSEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LLHVIYQRVDKAVGLAEAALGLARANNELLKRLQEEVGDLRQGKVSIPDEDGESRAHSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 LLHVIYQRVDKAVGLAEAALGLARANNELLKRLQEEVGDLRQGKVSIPDEDGESRAHSSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 PEEPGPLKESPGEAFKALSAVEEECDSVGSGVQVVIEELRQLGAASVGPGPLGFPATQRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 PEEPGPLKESPGEAFKALSAVEEECDSVGSGVQVVIEELRQLGAASVGPGPLGFPATQRD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 MRLPGCTLAVSEAAPLLNPLVDDYVASEGAVQRVLVPAYAKQLSPATQLAIQRATPETGP
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MRLPGCTLAASEAAPLLNPLVDDYVASEGAVQRVLVPAYAKQLSPATQLAIQRATPETGP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ENGTKLPPPRPEDMLNAAAALDSALEESGPGSTGELRHSLGLTVSPCRTRGSGQKNSRRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 ENGTKLPPPRPEDMLNAAAALDSALEESGPGSTGELRHSLGLTVSPCRTRGSGQKNSRRK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 RDLVLSKLVHNVHNHITNDKRFNGSESIKSSWNISVVKFLLEKLKQELVTSPHNYTDKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 RDLVLSKLVHNVHNHITNDKRFNGSESIKSSWNISVVKFLLEKLKQELVTSPHNYTDKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYRLFANRSSIMRHFGPEDQRLWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 KGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYRLFANRSSIMRHFGPEDQRLWN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 DVTEELMSDEEDSLNEPGVWVARPPRFRAQRLTELCYHLDANSKHGTKANRVYGPPSDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 DVTEELMSDEEDSLNEPGVWVARPPRFRAQRLTELCYHLDANSKHGTKANRVYGPPSDRL
430 440 450 460 470 480
490 500 510 520 530
pF1KE4 PSAEAQLLPPELYNPNFQEEEDEGGDENAPGSPSFDQPHKTCCPDLNSFIEIKVEKDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 PSAEAQLLPPELYNPNFQEEEDEGGDENAPGSPSFDQPHKTCCPDLNSFIEIKVEKDE
490 500 510 520 530
>>CCDS61400.1 C14orf93 gene_id:60686|Hs108|chr14 (498 aa)
initn: 3308 init1: 2888 opt: 2897 Z-score: 2765.1 bits: 521.2 E(32554): 1.1e-147
Smith-Waterman score: 3232; 92.4% identity (92.6% similar) in 538 aa overlap (1-538:1-498)
10 20 30 40 50 60
pF1KE4 MSFSATILFSPPSGSEARCCCCACKSETNGGNTGSQGGNPPPSTPITVTGHGLAVQSSEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 MSFSATILFSPPSGSEARCCCCACKSETNGGNTGSQGGNPPPSTPITVTGHGLAVQSSEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LLHVIYQRVDKAVGLAEAALGLARANNELLKRLQEEVGDLRQGKVSIPDEDGESRAHSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 LLHVIYQRVDKAVGLAEAALGLARANNELLKRLQEEVGDLRQGKVSIPDEDGESRAHSSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 PEEPGPLKESPGEAFKALSAVEEECDSVGSGVQVVIEELRQLGAASVGPGPLGFPATQRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 PEEPGPLKESPGEAFKALSAVEEECDSVGSGVQVVIEELRQLGAASVGPGPLGFPATQRD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 MRLPGCTLAVSEAAPLLNPLVDDYVASEGAVQRVLVPAYAKQLSPATQLAIQRATPETGP
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 MRLPGCTLAASEAAPLLNPLVDDYVASEGAVQRVLVPAYAKQLSPATQLAIQRATPETGP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ENGTKLPPPRPEDMLNAAAALDSALEESGPGSTGELRHSLGLTVSPCRTRGSGQKNSRRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 ENGTKLPPPRPEDMLNAAAALDSALEESGPGSTGELRHSLGLTVSPCRTRGSGQKNSRRK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 RDLVLSKLVHNVHNHITNDKRFNGSESIKSSWNISVVKFLLEKLKQELVTSPHNYTDKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 RDLVLSKLVHNVHNHITNDKRFNGSESIKSSWNISVVKFLLEKLKQELVTSPHNYTDKEL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 KGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYRLFANRSSIMRHFGPEDQRLWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 KGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYRLFANRSSIMRHFGPEDQRLWN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 DVTEELMSDEEDSLNEPGVWVARPPRFRAQRLTELCYHLDANSKHGTKANRVYGPPSDRL
::::::::::::::::: :::
CCDS61 DVTEELMSDEEDSLNEP----------------------------------------DRL
430 440
490 500 510 520 530
pF1KE4 PSAEAQLLPPELYNPNFQEEEDEGGDENAPGSPSFDQPHKTCCPDLNSFIEIKVEKDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 PSAEAQLLPPELYNPNFQEEEDEGGDENAPGSPSFDQPHKTCCPDLNSFIEIKVEKDE
450 460 470 480 490
>>CCDS61399.1 C14orf93 gene_id:60686|Hs108|chr14 (358 aa)
initn: 2406 init1: 2406 opt: 2406 Z-score: 2299.1 bits: 434.5 E(32554): 9.7e-122
Smith-Waterman score: 2406; 99.7% identity (100.0% similar) in 358 aa overlap (181-538:1-358)
160 170 180 190 200 210
pF1KE4 GVQVVIEELRQLGAASVGPGPLGFPATQRDMRLPGCTLAVSEAAPLLNPLVDDYVASEGA
:::::::::.::::::::::::::::::::
CCDS61 MRLPGCTLAASEAAPLLNPLVDDYVASEGA
10 20 30
220 230 240 250 260 270
pF1KE4 VQRVLVPAYAKQLSPATQLAIQRATPETGPENGTKLPPPRPEDMLNAAAALDSALEESGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 VQRVLVPAYAKQLSPATQLAIQRATPETGPENGTKLPPPRPEDMLNAAAALDSALEESGP
40 50 60 70 80 90
280 290 300 310 320 330
pF1KE4 GSTGELRHSLGLTVSPCRTRGSGQKNSRRKRDLVLSKLVHNVHNHITNDKRFNGSESIKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 GSTGELRHSLGLTVSPCRTRGSGQKNSRRKRDLVLSKLVHNVHNHITNDKRFNGSESIKS
100 110 120 130 140 150
340 350 360 370 380 390
pF1KE4 SWNISVVKFLLEKLKQELVTSPHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 SWNISVVKFLLEKLKQELVTSPHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEE
160 170 180 190 200 210
400 410 420 430 440 450
pF1KE4 KKLRSRRYRLFANRSSIMRHFGPEDQRLWNDVTEELMSDEEDSLNEPGVWVARPPRFRAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 KKLRSRRYRLFANRSSIMRHFGPEDQRLWNDVTEELMSDEEDSLNEPGVWVARPPRFRAQ
220 230 240 250 260 270
460 470 480 490 500 510
pF1KE4 RLTELCYHLDANSKHGTKANRVYGPPSDRLPSAEAQLLPPELYNPNFQEEEDEGGDENAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 RLTELCYHLDANSKHGTKANRVYGPPSDRLPSAEAQLLPPELYNPNFQEEEDEGGDENAP
280 290 300 310 320 330
520 530
pF1KE4 GSPSFDQPHKTCCPDLNSFIEIKVEKDE
::::::::::::::::::::::::::::
CCDS61 GSPSFDQPHKTCCPDLNSFIEIKVEKDE
340 350
538 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 04:09:58 2016 done: Sun Nov 6 04:09:58 2016
Total Scan time: 4.230 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]