Result of FASTA (ccds) for
pFN21AE4115
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4115, 488 aa
1>>>pF1KE4115 488 - 488 aa - 488 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6329+/-0.00119; mu= 3.3854+/- 0.071
mean_var=216.7670+/-45.300, 0's: 0 Z-trim(109.6): 132 B-trim: 545 in 2/51
Lambda= 0.087112
statistics sampled from 11021 (11157) to 11021 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.334), width: 16
Scan time: 1.530
The best scores are: opt bits E(33420)
CCDS31390.1 TRIM6 gene_id:117854|Hs109|chr11 ( 488) 3352 434.4 1.4e-121
CCDS31389.1 TRIM6 gene_id:117854|Hs109|chr11 ( 516) 3352 434.4 1.4e-121
CCDS55738.1 TRIM6 gene_id:117854|Hs109|chr11 ( 313) 2140 281.9 6.9e-76
CCDS31388.1 TRIM34 gene_id:445372|Hs109|chr11 ( 842) 2034 269.0 1.5e-71
CCDS31391.1 TRIM34 gene_id:53840|Hs109|chr11 ( 488) 1869 248.0 1.7e-65
CCDS31393.1 TRIM5 gene_id:85363|Hs109|chr11 ( 493) 1810 240.6 3e-63
CCDS41612.1 TRIM22 gene_id:10346|Hs109|chr11 ( 498) 1583 212.1 1.2e-54
CCDS31392.1 TRIM5 gene_id:85363|Hs109|chr11 ( 326) 1280 173.9 2.5e-43
CCDS31394.1 TRIM5 gene_id:85363|Hs109|chr11 ( 347) 1280 173.9 2.6e-43
CCDS44525.1 TRIM21 gene_id:6737|Hs109|chr11 ( 475) 1048 144.8 1.9e-34
CCDS1636.1 TRIM58 gene_id:25893|Hs109|chr1 ( 486) 851 120.1 5.6e-27
CCDS4568.1 TRIM38 gene_id:10475|Hs109|chr6 ( 465) 846 119.4 8.4e-27
CCDS31356.1 TRIM68 gene_id:55128|Hs109|chr11 ( 485) 802 113.9 4e-25
CCDS34378.1 TRIM39 gene_id:56658|Hs109|chr6 ( 488) 760 108.6 1.6e-23
CCDS31048.1 TRIM11 gene_id:81559|Hs109|chr1 ( 468) 754 107.9 2.6e-23
CCDS78121.1 RPP21 gene_id:202658|Hs109|chr6 ( 503) 704 101.6 2.1e-21
CCDS34375.1 TRIM10 gene_id:10107|Hs109|chr6 ( 481) 692 100.1 5.8e-21
CCDS3808.1 TRIM60 gene_id:166655|Hs109|chr4 ( 471) 680 98.6 1.6e-20
CCDS4654.1 TRIM27 gene_id:5987|Hs109|chr6 ( 513) 680 98.6 1.7e-20
CCDS1571.1 TRIM17 gene_id:51127|Hs109|chr1 ( 477) 664 96.6 6.6e-20
CCDS4678.1 TRIM26 gene_id:7726|Hs109|chr6 ( 539) 637 93.2 7.6e-19
CCDS5678.1 TRIM4 gene_id:89122|Hs109|chr7 ( 474) 617 90.7 3.9e-18
CCDS4676.1 TRIM10 gene_id:10107|Hs109|chr6 ( 395) 588 87.0 4.3e-17
CCDS4466.1 TRIM41 gene_id:90933|Hs109|chr5 ( 630) 571 85.0 2.7e-16
CCDS44327.1 TRIM17 gene_id:51127|Hs109|chr1 ( 343) 560 83.4 4.4e-16
CCDS34374.1 TRIM31 gene_id:11074|Hs109|chr6 ( 425) 560 83.5 5.2e-16
CCDS4677.1 TRIM15 gene_id:89870|Hs109|chr6 ( 465) 547 81.9 1.7e-15
CCDS34377.1 TRIM39 gene_id:56658|Hs109|chr6 ( 518) 543 81.4 2.7e-15
CCDS4465.1 TRIM41 gene_id:90933|Hs109|chr5 ( 518) 540 81.0 3.4e-15
CCDS32220.1 TRIM69 gene_id:140691|Hs109|chr15 ( 500) 532 80.0 6.7e-15
CCDS376.1 TRIM62 gene_id:55223|Hs109|chr1 ( 475) 529 79.6 8.4e-15
CCDS2015.1 TRIM43 gene_id:129868|Hs109|chr2 ( 446) 480 73.4 5.7e-13
CCDS10498.1 MEFV gene_id:4210|Hs109|chr16 ( 781) 484 74.1 6.2e-13
CCDS55762.1 TRIM49B gene_id:283116|Hs109|chr11 ( 452) 478 73.2 6.9e-13
CCDS60930.1 TRIM49D1 gene_id:399939|Hs109|chr11 ( 452) 461 71.0 3e-12
CCDS8287.1 TRIM49 gene_id:57093|Hs109|chr11 ( 452) 460 70.9 3.3e-12
CCDS53694.1 TRIM49C gene_id:642612|Hs109|chr11 ( 452) 460 70.9 3.3e-12
CCDS3851.1 TRIML1 gene_id:339976|Hs109|chr4 ( 468) 451 69.8 7.4e-12
CCDS6056.2 TRIM35 gene_id:23087|Hs109|chr8 ( 493) 438 68.2 2.4e-11
CCDS4462.1 TRIM7 gene_id:81786|Hs109|chr5 ( 511) 430 67.2 4.9e-11
CCDS73363.1 TRIM64 gene_id:120146|Hs109|chr11 ( 449) 426 66.6 6.4e-11
>>CCDS31390.1 TRIM6 gene_id:117854|Hs109|chr11 (488 aa)
initn: 3352 init1: 3352 opt: 3352 Z-score: 2296.7 bits: 434.4 E(33420): 1.4e-121
Smith-Waterman score: 3352; 100.0% identity (100.0% similar) in 488 aa overlap (1-488:1-488)
10 20 30 40 50 60
pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 VDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 VAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 SLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIP
430 440 450 460 470 480
pF1KE4 MTLRRPSS
::::::::
CCDS31 MTLRRPSS
>>CCDS31389.1 TRIM6 gene_id:117854|Hs109|chr11 (516 aa)
initn: 3352 init1: 3352 opt: 3352 Z-score: 2296.3 bits: 434.4 E(33420): 1.4e-121
Smith-Waterman score: 3352; 100.0% identity (100.0% similar) in 488 aa overlap (1-488:29-516)
10 20 30
pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGH
::::::::::::::::::::::::::::::::
CCDS31 MCGSERILQAGNILEIRVGQAGARRVATMTSPVLVDIREEVTCPICLELLTEPLSIDCGH
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE4 SFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQL
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE4 KAVLCADHGEKLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KAVLCADHGEKLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLK
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE4 NEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKG
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE4 LRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPT
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE4 KLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSG
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE4 PSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAY
370 380 390 400 410 420
400 410 420 430 440 450
pF1KE4 SRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNH
430 440 450 460 470 480
460 470 480
pF1KE4 GFPIYTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS
::::::::::::::::::::::::::::::::::::
CCDS31 GFPIYTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS
490 500 510
>>CCDS55738.1 TRIM6 gene_id:117854|Hs109|chr11 (313 aa)
initn: 2140 init1: 2140 opt: 2140 Z-score: 1476.1 bits: 281.9 E(33420): 6.9e-76
Smith-Waterman score: 2140; 100.0% identity (100.0% similar) in 313 aa overlap (176-488:1-313)
150 160 170 180 190 200
pF1KE4 ESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKL
::::::::::::::::::::::::::::::
CCDS55 MEPERCRIQTEFNQLRNILDRVEQRELKKL
10 20 30
210 220 230 240 250 260
pF1KE4 EQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLR
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE4 KPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRF
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE4 VGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHF
160 170 180 190 200 210
390 400 410 420 430 440
pF1KE4 AQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVS
220 230 240 250 260 270
450 460 470 480
pF1KE4 FYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS
:::::::::::::::::::::::::::::::::::::::::::
CCDS55 FYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS
280 290 300 310
>>CCDS31388.1 TRIM34 gene_id:445372|Hs109|chr11 (842 aa)
initn: 2278 init1: 2034 opt: 2034 Z-score: 1398.3 bits: 269.0 E(33420): 1.5e-71
Smith-Waterman score: 2038; 79.9% identity (86.5% similar) in 399 aa overlap (1-389:29-426)
10 20 30
pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGH
::::::::::::::::::::::::::::::::
CCDS31 MCGSERILQAGNILEIRVGQAGARRVATMTSPVLVDIREEVTCPICLELLTEPLSIDCGH
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE4 SFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQL
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE4 KAVLCADHGEKLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KAVLCADHGEKLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLK
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE4 NEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKG
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE4 LRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPT
250 260 270 280 290 300
280 290 300 310 320
pF1KE4 KLRSMFRAPDLKRMLRVCRELTDVQSYW-VDVTLNPHTANLNLVLAKNRRQVRFVGAK--
:::::::::::::::::::::::::::: .. .:. . . : .. . ...:
CCDS31 KLRSMFRAPDLKRMLRVCRELTDVQSYWAIQGSLTRRERRASGVRTRRSQGSSAMASKIL
310 320 330 340 350 360
330 340 350 360 370 380
pF1KE4 ------VSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSL-GPTFSF
:. : ::: . : : : . :. . .. . : : . : ..::
CCDS31 LNVQEEVTCPICLELLTEPLSLDCGH-SLCRACITVSNKEAVTSMGGKSSCPVCGISYSF
370 380 390 400 410
390 400 410 420 430 440
pF1KE4 NHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAG
.:. :.
CCDS31 EHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEH
420 430 440 450 460 470
>--
initn: 1168 init1: 1168 opt: 1557 Z-score: 1074.3 bits: 209.0 E(33420): 1.7e-53
Smith-Waterman score: 1557; 60.0% identity (78.0% similar) in 422 aa overlap (73-488:427-842)
50 60 70 80 90 100
pF1KE4 GRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGE
::::::.::.:: :.: . : :: :::
CCDS31 NKEAVTSMGGKSSCPVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGE
400 410 420 430 440 450
110 120 130 140 150 160
pF1KE4 KLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLT
:: :::.:: :::::::::::::::::: :.::: .: :::.: ::.::.::.:::::
CCDS31 KLLLFCKEDRKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLE
460 470 480 490 500 510
170 180 190 200 210 220
pF1KE4 AFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAEND
: :::.::::: :.. :: ::::::.:::.::. :::::..::.:::: : . :::..
CCDS31 ADIREEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDE
520 530 540 550 560 570
230 240 250 260 270 280
pF1KE4 LVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPD
::.: : .::::::.: : : ::::::::.: . . ::.: :.::. . ::...:.:::
CCDS31 LVQQKQLVRELISDVECRSQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAPD
580 590 600 610 620 630
290 300 310 320 330 340
pF1KE4 LKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDC
:.:::.. :::: :. :::::::: . ::::::....::: ... . .: :.
CCDS31 LSRMLQMFRELTAVRCYWVDVTLNSVNLNLNLVLSEDQRQV--ISVPIWPFQC----YNY
640 650 660 670 680 690
350 360 370 380 390 400
pF1KE4 SVLGSQHFSSGKHYWEVDVAKKTAWILGV-C-SNSLGPTFSFNHFAQNHSAYSRYQPQSG
.:::::.::::::::::::.::::::::: : . : . . :. .. :..:.: :
CCDS31 GVLGSQYFSSGKHYWEVDVSKKTAWILGVYCRTYSRHMKYVVRRCANRQNLYTKYRPLFG
700 710 720 730 740 750
410 420 430 440 450
pF1KE4 YWVIGLQHNHEYRAYEDS---SPSLL-LSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPI
:::::::.. .: ..:.: .: .: :::.::: ::::::::::: :::.:::.:: :
CCDS31 YWVIGLQNKCKYGVFEESLSSDPEVLTLSMAVPPCRVGVFLDYEAGIVSFFNVTSHGSLI
760 770 780 790 800 810
460 470 480
pF1KE4 YTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS
: ::: : . ::::: :: :::: :::
CCDS31 YKFSKCCFSQPVYPYFNPWNCPAPMTLCPPSS
820 830 840
>>CCDS31391.1 TRIM34 gene_id:53840|Hs109|chr11 (488 aa)
initn: 1480 init1: 1480 opt: 1869 Z-score: 1289.4 bits: 248.0 E(33420): 1.7e-65
Smith-Waterman score: 1869; 59.7% identity (78.7% similar) in 494 aa overlap (1-488:1-488)
10 20 30 40 50 60
pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ
:.: .:....:::::::::::::::::.:::::.:.:::: ...:.: .. :. :::::
CCDS31 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE
::. .:. :.::::::.::.:: :.: . : :: ::::: :::.:: ::::::::
CCDS31 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER
:::::::::: :.::: .: :::.: ::.::.::.::::: : :::.::::: :.. ::
CCDS31 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR
::::::.:::.::. :::::..::.:::: : . :::..::.: : .::::::.: :
CCDS31 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW
: ::::::::.: . . ::.: :.::. . ::...:.::::.:::.. :::: :. ::
CCDS31 SQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAPDLSRMLQMFRELTAVRCYW
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 VDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVD
:::::: . ::::::....::: ... . .: :. .:::::.:::::::::::
CCDS31 VDVTLNSVNLNLNLVLSEDQRQV--ISVPIWPFQC----YNYGVLGSQYFSSGKHYWEVD
310 320 330 340 350
370 380 390 400 410
pF1KE4 VAKKTAWILGV-C-SNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDS
:.::::::::: : . : . . :. .. :..:.: ::::::::.. .: ..:.:
CCDS31 VSKKTAWILGVYCRTYSRHMKYVVRRCANRQNLYTKYRPLFGYWVIGLQNKCKYGVFEES
360 370 380 390 400 410
420 430 440 450 460 470
pF1KE4 SPS----LLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNP
: : :::.::: ::::::::::: :::.:::.:: :: ::: : . :::::
CCDS31 LSSDPEVLTLSMAVPPCRVGVFLDYEAGIVSFFNVTSHGSLIYKFSKCCFSQPVYPYFNP
420 430 440 450 460 470
480
pF1KE4 CNCVIPMTLRRPSS
:: :::: :::
CCDS31 WNCPAPMTLCPPSS
480
>>CCDS31393.1 TRIM5 gene_id:85363|Hs109|chr11 (493 aa)
initn: 1715 init1: 885 opt: 1810 Z-score: 1249.3 bits: 240.6 E(33420): 3e-63
Smith-Waterman score: 1810; 56.4% identity (79.3% similar) in 502 aa overlap (1-488:1-493)
10 20 30 40 50 60
pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ
:.: .::...:::::::::::::.:::.::::::::::.: : ..:.. ..:: :::::.
CCDS31 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSML-DKGESSCPVCR
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE
:::: :.:::::.::::..:::: :.: : :. :: ::::: :::::::::::::::
CCDS31 ISYQPENIRPNRHVANIVEKLREVKLSPEGQ-KVDHCARHGEKLLLFCQEDGKVICWLCE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER
::::::::::::.::::.::: :.: .:. :....::::.: : :::.:.:::.:.. ..
CCDS31 RSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR
. ..:.:::.::: :. ::..::.::. :. . ..:...:.:::::::::::::.:
CCDS31 TNVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW
:::.::::: :. : .:.: ::.:::..: . : .::::::: ::.: ::::::. ::
CCDS31 LQGSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYW
240 250 260 270 280 290
310 320 330 340 350
pF1KE4 VDVTLNPHTANLNLVLAKNRRQVR------FVGAKVSGPSCLEKHYDCS-VLGSQHFSSG
::::. :.. . :.....::: . ::. . . . . :. .:::: ..::
CCDS31 VDVTVAPNNISCA-VISEDKRQVSSPKPQIIYGARGTRYQTFVNFNYCTGILGSQSITSG
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE4 KHYWEVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYR
::::::::.::::::::::.. . : .. .. .:.. :::. :::::::... .
CCDS31 KHYWEVDVSKKTAWILGVCAG-FQPD-AMCNIEKNEN----YQPKYGYWVIGLEEGVKCS
360 370 380 390 400 410
420 430 440 450 460
pF1KE4 AYEDSS---PSLL----LSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPT
:..::: ::. ::. . : :::::::::: ::::.:.::::: :: ::. :
CCDS31 AFQDSSFHTPSVPFIVPLSVIICPDRVGVFLDYEACTVSFFNITNHGFLIYKFSHCSFSQ
420 430 440 450 460 470
470 480
pF1KE4 TLCPYFNPCNCVIPMTLRRPSS
. ::.:: .: .:::: :::
CCDS31 PVFPYLNPRKCGVPMTLCSPSS
480 490
>>CCDS41612.1 TRIM22 gene_id:10346|Hs109|chr11 (498 aa)
initn: 1837 init1: 1432 opt: 1583 Z-score: 1095.0 bits: 212.1 E(33420): 1.2e-54
Smith-Waterman score: 1845; 57.5% identity (77.4% similar) in 501 aa overlap (1-488:1-498)
10 20 30 40 50 60
pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ
: : :::..::::::::::::::::.:::::::::::: . .:::: ..:: ::::::
CCDS41 MDFSVKVDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE
: .:::::::::::::::.:..:: ..: . : .: ::.:::.::.::::::::.::
CCDS41 TRFQPGNLRPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWVCE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER
::::.::.:: ..::..: :::.: .:..: .:.:::::: ::...:.::: .. ::
CCDS41 LSQEHQGHQTFRINEVVKECQEKLQVALQRLIKEDQEAEKLEDDIRQERTAWKNYIQIER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR
.: ::..: ::: :::::.:::. : . : . : ..::.: :. :::::.::
CCDS41 QKILKGFNEMRVILDNEEQRELQKLEEGEVNVLDNLAAATDQLVQQRQDASTLISDLQRR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW
.::..:.:::: :: .::: :::.::... ::.:.::.:::. ::.: .:::::: ::
CCDS41 LRGSSVEMLQDVIDVMKRSESWTLKKPKSVSKKLKSVFRVPDLSGMLQVLKELTDVQYYW
250 260 270 280 290 300
310 320 330 340 350
pF1KE4 VDVTLNPHTANLNLVLAKNRRQVRFVGA---KVSGPSCLEKHYDCSVLGSQHFSSGKHYW
::: ::: .:. :.... ..:::. : . : :.: : . . .:.: :.:::::.::
CCDS41 VDVMLNPGSATSNVAISVDQRQVKTVRTCTFKNSNP-CDFSAF--GVFGCQYFSSGKYYW
310 320 330 340 350
360 370 380 390 400 410
pF1KE4 EVDVAKKTAWILGVCS--NSLGPT----FSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHE
::::. : :::::: : .::. :.:. .. ..::::.:: ::::::::.. :
CCDS41 EVDVSGKIAWILGVHSKISSLNKRKSSGFAFDPSVNYSKVYSRYRPQYGYWVIGLQNTCE
360 370 380 390 400 410
420 430 440 450 460
pF1KE4 YRAYEDSSPS----LLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTT
: :.:::: : : : :.::: :.::::::::: :::.:::::: :: :: :
CCDS41 YNAFEDSSSSDPKVLTLFMAVPPCRIGVFLDYEAGIVSFFNVTNHGALIYKFSGCRFSRP
420 430 440 450 460 470
470 480
pF1KE4 LCPYFNPCNCVIPMTLRRPSS
::::: ::..:::. :::
CCDS41 AYPYFNPWNCLVPMTVCPPSS
480 490
>>CCDS31392.1 TRIM5 gene_id:85363|Hs109|chr11 (326 aa)
initn: 1092 init1: 846 opt: 1280 Z-score: 891.7 bits: 173.9 E(33420): 2.5e-43
Smith-Waterman score: 1280; 63.0% identity (85.7% similar) in 300 aa overlap (1-300:1-298)
10 20 30 40 50 60
pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ
:.: .::...:::::::::::::.:::.::::::::::.: : ..:.. ..:: :::::.
CCDS31 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSML-DKGESSCPVCR
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE
:::: :.:::::.::::..:::: :.: : :. :: ::::: :::::::::::::::
CCDS31 ISYQPENIRPNRHVANIVEKLREVKLSPEGQ-KVDHCARHGEKLLLFCQEDGKVICWLCE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER
::::::::::::.::::.::: :.: .:. :....::::.: : :::.:.:::.:.. ..
CCDS31 RSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR
. ..:.:::.::: :. ::..::.::. :. . ..:...:.:::::::::::::.:
CCDS31 TNVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW
:::.::::: :. : .:.: ::.:::..: . : .::::::: ::.: ::::::. ::
CCDS31 LQGSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYW
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE4 VDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVD
CCDS31 GWSAMARSRFTATSTSQIQAILLPQPPK
300 310 320
>>CCDS31394.1 TRIM5 gene_id:85363|Hs109|chr11 (347 aa)
initn: 1287 init1: 846 opt: 1280 Z-score: 891.3 bits: 173.9 E(33420): 2.6e-43
Smith-Waterman score: 1280; 63.0% identity (85.7% similar) in 300 aa overlap (1-300:1-298)
10 20 30 40 50 60
pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ
:.: .::...:::::::::::::.:::.::::::::::.: : ..:.. ..:: :::::.
CCDS31 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSML-DKGESSCPVCR
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE
:::: :.:::::.::::..:::: :.: : :. :: ::::: :::::::::::::::
CCDS31 ISYQPENIRPNRHVANIVEKLREVKLSPEGQ-KVDHCARHGEKLLLFCQEDGKVICWLCE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER
::::::::::::.::::.::: :.: .:. :....::::.: : :::.:.:::.:.. ..
CCDS31 RSQEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR
. ..:.:::.::: :. ::..::.::. :. . ..:...:.:::::::::::::.:
CCDS31 TNVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 CQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYW
:::.::::: :. : .:.: ::.:::..: . : .::::::: ::.: ::::::. ::
CCDS31 LQGSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYW
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE4 VDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVD
CCDS31 GKEKSHYHKPPCGLSLLLSLSFRILCSLLGSCFKIYDSPSKTHITYPSL
300 310 320 330 340
>>CCDS44525.1 TRIM21 gene_id:6737|Hs109|chr11 (475 aa)
initn: 1371 init1: 749 opt: 1048 Z-score: 731.9 bits: 144.8 E(33420): 1.9e-34
Smith-Waterman score: 1368; 46.6% identity (71.2% similar) in 466 aa overlap (11-474:12-448)
10 20 30 40 50
pF1KE4 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVC
:::::::::. ..::.::.::::::: :: : .:. : ::::
CCDS44 MASAARLTMMWEEVTCPICLDPFVEPVSIECGHSFCQECI------SQVGKGGGSVCPVC
10 20 30 40 50
60 70 80 90 100 110
pF1KE4 QTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLC
. . ::::::.:::.: :.:. . .. :: :::.:.:::..:::..::.:
CCDS44 RQRFLLKNLRPNRQLANMVNNLKEISQEAREGTQGERCAVHGERLHLFCEKDGKALCWVC
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE4 ERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPE
.:..:: : .::.:::::::.: .: .:. ... :::: . : :...::. .: .
CCDS44 AQSRKHRDHAMVPLEEAAQEYQEKLQVALGELRRKQELAEKLEVEIAIKRADWKKTVETQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 RCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLER
. ::..:: : .:.: . :::.:..::..:.. :::. : : :..:.:.:.::::.:.:
CCDS44 KSRIHAEFVQQKNFLVEEEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQELISELDR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE4 RCQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSY
::..:..::::.: : :::: :.:. . .:::. ..: ::.:::.:
CCDS44 RCHSSALELLQEVIIVLERSESWNLKDLDITSPELRSVCHVPGLKKMLRTCA--------
240 250 260 270 280
300 310 320 330 340 350
pF1KE4 WVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCS--VLGSQHFSSGKHYW
: .::.: ::: :.:...:::::. .. : :. :...: :::.::: ::::::
CCDS44 -VHITLDPDTANPWLILSEDRRQVRLGDTQQSIPGN-EERFDSYPMVLGAQHFHSGKHYW
290 300 310 320 330 340
360 370 380 390 400 410
pF1KE4 EVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYED
::::. : :: :::: .:. .:: . .::.:.: : ....:.:
CCDS44 EVDVTGKEAWDLGVCRDSVRRK---GHFLLSS--------KSGFWTIWLWNKQKYEA--G
350 360 370 380 390
420 430 440 450 460 470
pF1KE4 SSPSLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNC
. :. : . ::: .::.::::::: :::::.:.:: ::.::. : : :.:.:
CCDS44 TYPQTPLHLQVPPCQVGIFLDYEAGMVSFYNITDHGSLIYSFSECAFTGPLRPFFSPGFN
400 410 420 430 440 450
480
pF1KE4 VIPMTLRRPSS
CCDS44 DGGKNTAPLTLCPLNIGSQGSTDY
460 470
488 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Jul 3 20:39:14 2020 done: Fri Jul 3 20:39:14 2020
Total Scan time: 1.530 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]