Result of FASTA (ccds) for
pFN21AE4075
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4075, 358 aa
1>>>pF1KE4075 358 - 358 aa - 358 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0688+/-0.000946; mu= 10.3870+/- 0.057
mean_var=162.2691+/-33.165, 0's: 0 Z-trim(110.9): 82 B-trim: 656 in 1/51
Lambda= 0.100683
statistics sampled from 11905 (11986) to 11905 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.726), E-opt: 0.2 (0.368), width: 16
Scan time: 2.850
The best scores are: opt bits E(32554)
CCDS1746.2 TRIM54 gene_id:57159|Hs108|chr2 ( 358) 2413 362.2 3.9e-100
CCDS6185.1 TRIM55 gene_id:84675|Hs108|chr8 ( 452) 1539 235.3 7.5e-62
CCDS6187.1 TRIM55 gene_id:84675|Hs108|chr8 ( 540) 1539 235.4 8.6e-62
CCDS6184.1 TRIM55 gene_id:84675|Hs108|chr8 ( 548) 1539 235.4 8.6e-62
CCDS273.1 TRIM63 gene_id:84676|Hs108|chr1 ( 353) 1437 220.4 1.8e-57
CCDS1745.2 TRIM54 gene_id:57159|Hs108|chr2 ( 400) 1218 188.7 7.5e-48
CCDS6186.1 TRIM55 gene_id:84675|Hs108|chr8 ( 241) 1107 172.3 3.7e-43
CCDS7764.1 TRIM3 gene_id:10612|Hs108|chr11 ( 744) 374 66.3 9.4e-11
>>CCDS1746.2 TRIM54 gene_id:57159|Hs108|chr2 (358 aa)
initn: 2413 init1: 2413 opt: 2413 Z-score: 1911.3 bits: 362.2 E(32554): 3.9e-100
Smith-Waterman score: 2413; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KE4 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
250 260 270 280 290 300
310 320 330 340 350
pF1KE4 RPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGEEGSAGPEEERPDGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 RPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGEEGSAGPEEERPDGP
310 320 330 340 350
>>CCDS6185.1 TRIM55 gene_id:84675|Hs108|chr8 (452 aa)
initn: 1519 init1: 887 opt: 1539 Z-score: 1223.9 bits: 235.3 E(32554): 7.5e-62
Smith-Waterman score: 1539; 63.8% identity (85.9% similar) in 354 aa overlap (1-351:1-352)
10 20 30 40 50 60
pF1KE4 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
:. ....: . . ..:::::::::::::::::.:::::::::::::::::.:.::::::
CCDS61 MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
.::.::..:::::::::::::::::::::::::::::::::::::::::.:: ..:.
CCDS61 YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRP-EKKS
70 80 90 100 110
130 140 150 160 170 180
pF1KE4 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
.: ::::::::.::::::.::::::::::::::::::.:::: ...:::::::::::.
CCDS61 DQP-MCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE
::..:::::.::.:.:..:.:::. :.::: : ..:. : ..:::::.:. :...: ::
CCDS61 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
:::..::.::..:.:::: ::::::.:: :.::.::..::.:: :..:.. ::.
CCDS61 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME
240 250 260 270 280 290
310 320 330 340 350
pF1KE4 RPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGE---EGSAGPEEERPDG
. : :::.:..::: ... ...: ::: :::: . .:: :: .: :
CCDS61 KIEHGYENMNHFTVNLNREEKIIREIDFYREDEDEEEEEGGEGEKEGEGEVGGEAVEVEE
300 310 320 330 340 350
pF1KE4 P
CCDS61 VENVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPVTQIGFEAP
360 370 380 390 400 410
>>CCDS6187.1 TRIM55 gene_id:84675|Hs108|chr8 (540 aa)
initn: 1519 init1: 887 opt: 1539 Z-score: 1222.9 bits: 235.4 E(32554): 8.6e-62
Smith-Waterman score: 1539; 63.8% identity (85.9% similar) in 354 aa overlap (1-351:1-352)
10 20 30 40 50 60
pF1KE4 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
:. ....: . . ..:::::::::::::::::.:::::::::::::::::.:.::::::
CCDS61 MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
.::.::..:::::::::::::::::::::::::::::::::::::::::.:: ..:.
CCDS61 YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRP-EKKS
70 80 90 100 110
130 140 150 160 170 180
pF1KE4 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
.: ::::::::.::::::.::::::::::::::::::.:::: ...:::::::::::.
CCDS61 DQP-MCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE
::..:::::.::.:.:..:.:::. :.::: : ..:. : ..:::::.:. :...: ::
CCDS61 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
:::..::.::..:.:::: ::::::.:: :.::.::..::.:: :..:.. ::.
CCDS61 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME
240 250 260 270 280 290
310 320 330 340 350
pF1KE4 RPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGE---EGSAGPEEERPDG
. : :::.:..::: ... ...: ::: :::: . .:: :: .: :
CCDS61 KIEHGYENMNHFTVNLNREEKIIREIDFYREDEDEEEEEGGEGEKEGEGEVGGEAVEVEE
300 310 320 330 340 350
pF1KE4 P
CCDS61 VENVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPVTQGEVVPT
360 370 380 390 400 410
>>CCDS6184.1 TRIM55 gene_id:84675|Hs108|chr8 (548 aa)
initn: 1519 init1: 887 opt: 1539 Z-score: 1222.8 bits: 235.4 E(32554): 8.6e-62
Smith-Waterman score: 1539; 63.8% identity (85.9% similar) in 354 aa overlap (1-351:1-352)
10 20 30 40 50 60
pF1KE4 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
:. ....: . . ..:::::::::::::::::.:::::::::::::::::.:.::::::
CCDS61 MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
.::.::..:::::::::::::::::::::::::::::::::::::::::.:: ..:.
CCDS61 YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRP-EKKS
70 80 90 100 110
130 140 150 160 170 180
pF1KE4 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
.: ::::::::.::::::.::::::::::::::::::.:::: ...:::::::::::.
CCDS61 DQP-MCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE
::..:::::.::.:.:..:.:::. :.::: : ..:. : ..:::::.:. :...: ::
CCDS61 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
:::..::.::..:.:::: ::::::.:: :.::.::..::.:: :..:.. ::.
CCDS61 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME
240 250 260 270 280 290
310 320 330 340 350
pF1KE4 RPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGE---EGSAGPEEERPDG
. : :::.:..::: ... ...: ::: :::: . .:: :: .: :
CCDS61 KIEHGYENMNHFTVNLNREEKIIREIDFYREDEDEEEEEGGEGEKEGEGEVGGEAVEVEE
300 310 320 330 340 350
pF1KE4 P
CCDS61 VENVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPVTQGEVVPT
360 370 380 390 400 410
>>CCDS273.1 TRIM63 gene_id:84676|Hs108|chr1 (353 aa)
initn: 783 init1: 783 opt: 1437 Z-score: 1145.2 bits: 220.4 E(32554): 1.8e-57
Smith-Waterman score: 1437; 60.7% identity (83.5% similar) in 346 aa overlap (10-352:7-350)
10 20 30 40 50 60
pF1KE4 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
:. :.. :.:::::::::::::::.:::::::::::::::::::.:::.::
CCDS27 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANP
10 20 30 40 50
70 80 90 100 110
pF1KE4 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-SSRPLHSK
: ::::.. ::::::::.:::::..:::::::::::::::::::::::: :::::..
CCDS27 YWTSRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE4 AEQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIA
. : ::.:::.::::::::.:::::::.::::: :: :::::: .... ::.::.. :.
CCDS27 S--HPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCIS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 MLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQ
::::::::::..:::.:. .. ..::.. :. :.:.:..: :.:.:.:.:::: ...::
CCDS27 MLVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE4 EEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELA
:.::. ...::.:: ..:. :.::::.::::..:: : .: ::.::... ::
CCDS27 EKKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE4 GRPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEE--EEVAPDGEEGSAGPEEERPDG
:. : :.:.:. ::. .::.:. ::.::: :: :: . ::.. : ::
CCDS27 GKTEQGFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ
300 310 320 330 340 350
pF1KE4 P
>>CCDS1745.2 TRIM54 gene_id:57159|Hs108|chr2 (400 aa)
initn: 1215 init1: 1215 opt: 1218 Z-score: 972.5 bits: 188.7 E(32554): 7.5e-48
Smith-Waterman score: 2240; 89.2% identity (89.2% similar) in 390 aa overlap (1-348:1-390)
10 20 30 40 50 60
pF1KE4 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
70 80 90 100 110 120
130 140 150 160 170
pF1KE4 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQK---------
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKKQDLTLLPR
130 140 150 160 170 180
180 190
pF1KE4 ---------------------------------SELSDGIAMLVAGNDRVQAVITQMEEV
:::::::::::::::::::::::::::
CCDS17 LECSGTNTTYCSLDLPSSSDPPILASQNTKIIDSELSDGIAMLVAGNDRVQAVITQMEEV
190 200 210 220 230 240
200 210 220 230 240 250
pF1KE4 CQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 CQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLE
250 260 270 280 290 300
260 270 280 290 300 310
pF1KE4 ASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQFTVRVEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 ASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQFTVRVEH
310 320 330 340 350 360
320 330 340 350
pF1KE4 VAEMLRTIDFQPGASGEEEEVAPDGEEGSAGPEEERPDGP
::::::::::::::::::::::::::::::
CCDS17 VAEMLRTIDFQPGASGEEEEVAPDGEEGSAGPEEERPDGP
370 380 390 400
>>CCDS6186.1 TRIM55 gene_id:84675|Hs108|chr8 (241 aa)
initn: 1090 init1: 645 opt: 1107 Z-score: 888.2 bits: 172.3 E(32554): 3.7e-43
Smith-Waterman score: 1107; 75.9% identity (93.6% similar) in 203 aa overlap (1-203:1-201)
10 20 30 40 50 60
pF1KE4 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
:. ....: . . ..:::::::::::::::::.:::::::::::::::::.:.::::::
CCDS61 MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
.::.::..:::::::::::::::::::::::::::::::::::::::::.:: ..:.
CCDS61 YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRP-EKKS
70 80 90 100 110
130 140 150 160 170 180
pF1KE4 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
.: ::::::::.::::::.::::::::::::::::::.:::: ...:::::::::::.
CCDS61 DQP-MCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE
::..:::::.::.:.:..:.:::
CCDS61 LVGSNDRVQGVISQLEDTCKTIEIGFEAPPLQGQAAAPASGSGADSEPARHIFSFSWLNS
180 190 200 210 220 230
>>CCDS7764.1 TRIM3 gene_id:10612|Hs108|chr11 (744 aa)
initn: 245 init1: 102 opt: 374 Z-score: 306.5 bits: 66.3 E(32554): 9.4e-11
Smith-Waterman score: 374; 25.1% identity (59.0% similar) in 295 aa overlap (20-302:15-290)
10 20 30 40 50
pF1KE4 MNFTVGFKPLLGDAHSMDNLEKQ-LICPICLEMFSKPVVILPCQHNLCRKCANDVFQASN
..:: :.: :::. .. : : ::: :..:..: .. . :.
CCDS77 MAKREDSPGPEVQPMDKQFLVCSICLDRYQCPKV-LPCLHTFCERCLQNYIPAQ-
10 20 30 40 50
60 70 80 90 100 110
pF1KE4 PLWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQ--------E
: :.: :: ::. .: ..:: .:: :... .... ..: :
CCDS77 -------SLTLS------CPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPE
60 70 80 90 100
120 130 140 150 160 170
pF1KE4 SSRPLHSKAEQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQK
. .:: : . : : .:: . ...:: .::. :. :.. : :.. .. : . ...:
CCDS77 DPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHK
110 120 130 140 150
180 190 200 210 220 230
pF1KE4 SELSDGIAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGEL
. :. . . . ...:.:. . . : ... . . .. ::.: .:..:: :
CCDS77 AALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQAL
160 170 180 190 200 210
240 250 260 270 280
pF1KE4 ---LQALAREQEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELIN
:... ... :: .:: .:. .: ...:.:.. :.. : .. .:
CCDS77 VSDLETICGAKQKVLQSQLDTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRE---
220 230 240 250 260 270
290 300 310 320 330 340
pF1KE4 KVGAMSKVELAGRPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGEEGSA
...:.. . ::
CCDS77 RLAALAAQAFPERPHENAQLELVLEVDGLRRSVLNLGALLTTSATAHETVATGEGLRQAL
280 290 300 310 320 330
358 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 03:59:27 2016 done: Sun Nov 6 03:59:28 2016
Total Scan time: 2.850 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]