FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4068, 355 aa 1>>>pF1KE4068 355 - 355 aa - 355 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3718+/-0.000632; mu= 17.0057+/- 0.038 mean_var=74.4398+/-14.794, 0's: 0 Z-trim(111.6): 23 B-trim: 0 in 0/52 Lambda= 0.148652 statistics sampled from 12520 (12540) to 12520 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.385), width: 16 Scan time: 2.960 The best scores are: opt bits E(32554) CCDS32365.1 SPSB3 gene_id:90864|Hs108|chr16 ( 355) 2496 544.0 7e-155 >>CCDS32365.1 SPSB3 gene_id:90864|Hs108|chr16 (355 aa) initn: 2496 init1: 2496 opt: 2496 Z-score: 2894.1 bits: 544.0 E(32554): 7e-155 Smith-Waterman score: 2496; 100.0% identity (100.0% similar) in 355 aa overlap (1-355:1-355) 10 20 30 40 50 60 pF1KE4 MARRPRNSRAWHFVLSAARRDADARAVALAGSTNWGYDSDGQHSDSDSDPEYSTLPPSIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MARRPRNSRAWHFVLSAARRDADARAVALAGSTNWGYDSDGQHSDSDSDPEYSTLPPSIP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 SAVPVTGESFCDCAGQSEASFCSSLHSAHRGRDCRCGEEDEYFDWVWDDLNKSSATLLSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 SAVPVTGESFCDCAGQSEASFCSSLHSAHRGRDCRCGEEDEYFDWVWDDLNKSSATLLSC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DNRKVSFHMEYSCGTAAIRGTKELGEGQHFWEIKMTSPVYGTDMMVGIGTSDVDLDKYRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 DNRKVSFHMEYSCGTAAIRGTKELGEGQHFWEIKMTSPVYGTDMMVGIGTSDVDLDKYRH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TFCSLLGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIGVHLDTWHGTLTFFKNRKCI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 TFCSLLGRDEDSWGLSYTGLLHHKGDKTSFSSRFGQGSIIGVHLDTWHGTLTFFKNRKCI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 GVAATKLQNKRFYPMVCSTAARSSMKVTRSCASATSLQYLCCHRLRQLRPDSGDTLEGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 GVAATKLQNKRFYPMVCSTAARSSMKVTRSCASATSLQYLCCHRLRQLRPDSGDTLEGLP 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 LPPGLKQVLHNKLGWVLSMSCSRRKAPVSDPQAATSAHPSSREPRPCQRKRCRRT ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LPPGLKQVLHNKLGWVLSMSCSRRKAPVSDPQAATSAHPSSREPRPCQRKRCRRT 310 320 330 340 350 355 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 03:32:15 2016 done: Sun Nov 6 03:32:15 2016 Total Scan time: 2.960 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]