Result of FASTA (omim) for
pFN21AE4054
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4054, 305 aa
1>>>pF1KE4054 305 - 305 aa - 305 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9280+/-0.000502; mu= 12.7874+/- 0.031
mean_var=115.6321+/-23.432, 0's: 0 Z-trim(111.5): 212 B-trim: 101 in 1/49
Lambda= 0.119271
statistics sampled from 19844 (20114) to 19844 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.236), width: 16
Scan time: 6.710
The best scores are: opt bits E(85289)
NP_078815 (OMIM: 300439) E3 ubiquitin-protein liga ( 402) 887 164.1 4.1e-40
NP_919445 (OMIM: 300439) E3 ubiquitin-protein liga ( 428) 830 154.3 3.8e-37
XP_016861149 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 250) 242 52.9 7.5e-07
XP_016861147 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 242 53.0 7.8e-07
XP_005247149 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 242 53.0 7.8e-07
XP_016861148 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 242 53.0 7.8e-07
XP_011510678 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 242 53.0 7.8e-07
XP_016861145 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 242 53.0 7.8e-07
XP_016861146 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 242 53.0 7.8e-07
XP_016861143 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 381) 242 53.1 1e-06
XP_011510675 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 381) 242 53.1 1e-06
NP_899237 (OMIM: 609247) E3 ubiquitin-protein liga ( 381) 242 53.1 1e-06
NP_009213 (OMIM: 609247) E3 ubiquitin-protein liga ( 381) 242 53.1 1e-06
XP_011510676 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 381) 242 53.1 1e-06
XP_016861144 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 381) 242 53.1 1e-06
XP_016861150 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 193) 224 49.7 5.3e-06
NP_001307294 (OMIM: 610431) E3 ubiquitin-protein l ( 315) 216 48.6 2e-05
NP_001307293 (OMIM: 610431) E3 ubiquitin-protein l ( 315) 216 48.6 2e-05
NP_001307291 (OMIM: 610431) E3 ubiquitin-protein l ( 315) 216 48.6 2e-05
NP_001307292 (OMIM: 610431) E3 ubiquitin-protein l ( 315) 216 48.6 2e-05
NP_001307286 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 216 48.6 2.1e-05
NP_001307288 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 216 48.6 2.1e-05
XP_016879916 (OMIM: 610431) PREDICTED: E3 ubiquiti ( 350) 216 48.6 2.1e-05
NP_001307290 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 216 48.6 2.1e-05
NP_001307287 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 216 48.6 2.1e-05
NP_056343 (OMIM: 610431) E3 ubiquitin-protein liga ( 350) 216 48.6 2.1e-05
NP_001307285 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 216 48.6 2.1e-05
NP_001307289 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 216 48.6 2.1e-05
NP_009150 (OMIM: 612489) RING finger protein 24 is ( 148) 208 46.9 3e-05
NP_001308678 (OMIM: 612489) RING finger protein 24 ( 148) 208 46.9 3e-05
NP_001127809 (OMIM: 612489) RING finger protein 24 ( 148) 208 46.9 3e-05
XP_011527448 (OMIM: 612489) PREDICTED: RING finger ( 163) 208 46.9 3.2e-05
NP_001127810 (OMIM: 612489) RING finger protein 24 ( 169) 208 46.9 3.3e-05
XP_016883109 (OMIM: 612489) PREDICTED: RING finger ( 169) 208 46.9 3.3e-05
XP_016883110 (OMIM: 612489) PREDICTED: RING finger ( 169) 208 46.9 3.3e-05
XP_011527447 (OMIM: 612489) PREDICTED: RING finger ( 169) 208 46.9 3.3e-05
NP_060233 (OMIM: 612482,617108) E3 ubiquitin-prote ( 783) 217 49.1 3.3e-05
NP_001292473 (OMIM: 612482,617108) E3 ubiquitin-pr ( 783) 217 49.1 3.3e-05
XP_016880289 (OMIM: 612482,617108) PREDICTED: E3 u ( 869) 217 49.2 3.6e-05
XP_011523257 (OMIM: 612482,617108) PREDICTED: E3 u ( 869) 217 49.2 3.6e-05
NP_115549 (OMIM: 612062) E3 ubiquitin-protein liga ( 836) 215 48.8 4.4e-05
XP_016884479 (OMIM: 612062) PREDICTED: E3 ubiquiti ( 841) 215 48.8 4.4e-05
XP_011528739 (OMIM: 612062) PREDICTED: E3 ubiquiti ( 841) 215 48.8 4.4e-05
XP_011528737 (OMIM: 612062) PREDICTED: E3 ubiquiti ( 841) 215 48.8 4.4e-05
XP_011528738 (OMIM: 612062) PREDICTED: E3 ubiquiti ( 841) 215 48.8 4.4e-05
XP_011528740 (OMIM: 612062) PREDICTED: E3 ubiquiti ( 841) 215 48.8 4.4e-05
NP_001193927 (OMIM: 612062) E3 ubiquitin-protein l ( 936) 215 48.9 4.8e-05
NP_001292474 (OMIM: 612482,617108) E3 ubiquitin-pr ( 656) 210 47.8 6.7e-05
XP_011523258 (OMIM: 612482,617108) PREDICTED: E3 u ( 742) 210 47.9 7.4e-05
XP_016877830 (OMIM: 605840) PREDICTED: E3 ubiquiti ( 993) 207 47.5 0.00013
>>NP_078815 (OMIM: 300439) E3 ubiquitin-protein ligase R (402 aa)
initn: 838 init1: 428 opt: 887 Z-score: 841.2 bits: 164.1 E(85289): 4.1e-40
Smith-Waterman score: 887; 48.4% identity (78.4% similar) in 273 aa overlap (39-304:29-297)
10 20 30 40 50 60
pF1KE4 STHSSVSSGLLRLSIFLLLSFPDSNGKAIWTAHLNITF--QVGNEITSELGESGVFGNHS
.:....:. ...: . : : ::.: :
NP_078 MNQENRSSFFWLLVIFTFLLKITASFSMSAYVTVTYYNETSNYTAIETCECGVYGLAS
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 PLERVSGVVALPEGWNQNACHPLTNFSRPKQADSWLALIERGGCTFTHKINVAAEKGANG
:. . :::..:.. : .:: :.:: :. :.::::::.:::..::..:....:..
NP_078 PVANAMGVVGIPKNNNYQACDHNTEFSNTKK--PWIALIERGNCTFSEKIQTAGRRNADA
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 VIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVGRMHMQW
:.::: ::.... :.. :. .:::.::.:::: .::.:::.:. ::..::::. : :
NP_078 VVIYNAPETGNQTIQMANFGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPW
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 VSHYIMYL-----FTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAIDQLQL
:.:: ... : . :::..:: . . :: : . .:.. :.:.:.:::: .:::
NP_078 VNHYSIFFVSVSFFIITAATVGYFIFYSARRL--RNARAQSRKQRQLKADAKKAIGRLQL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 RVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCD
:.::.::.:. . :.:.::.. :::.:.::::::.:.:::.:.::::: ::::::::::
NP_078 RTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCD
240 250 260 270 280 290
pF1KE4 ILKT
:::
NP_078 ILKALGIEVDVEDGSVSLQVPVSNEISNSASSHEEDNRSETASSGYASVQGTDEPPLEEH
300 310 320 330 340 350
>>NP_919445 (OMIM: 300439) E3 ubiquitin-protein ligase R (428 aa)
initn: 1001 init1: 428 opt: 830 Z-score: 787.8 bits: 154.3 E(85289): 3.8e-37
Smith-Waterman score: 1003; 51.3% identity (76.3% similar) in 308 aa overlap (16-304:18-323)
10 20 30 40 50
pF1KE4 MSFLRITPSTHSSVSSGLLRLSIFLLLS--FPDSNG-KAIWTAHLNITFQVG----NE
: :: ..: :: : : : .:.:::.::....: :.
NP_919 MGPPPGAGVSCRGGCGFSRLLAWCFLLALSPQAPGSRGAEAVWTAYLNVSWRVPHTGVNR
10 20 30 40 50 60
60 70 80 90 100
pF1KE4 ITSELGESGVFGNHSPLERVSGVVALPEGWNQ-NACHPLTNFSRPKQADS-----WLALI
. ::.: ::.:. :::: :.::.. :.: . :::.: :::. : : :::::
NP_919 TVWELSEEGVYGQDSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE4 ERGG-CTFTHKINVAAEKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEIL
.::: :::. ::..: :.::.:..:.:. :: ..:.:::: :. .:::.::.:::: .::
NP_919 QRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKIL
130 140 150 160 170 180
170 180 190 200 210
pF1KE4 HSIQKGVYVTVIIEVGRMHMQWVSHYIMYL-----FTFLAATIAYFYLDCVWRLTPRVPN
.:::.:. ::..::::. : ::.:: ... : . :::..:: . . :: :
NP_919 QSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRL--RNAR
190 200 210 220 230
220 230 240 250 260 270
pF1KE4 SFTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHF
. .:.. :.:.:.:::: .::::.::.::.:. . :.:.::.. :::.:.::::::.:.
NP_919 AQSRKQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHI
240 250 260 270 280 290
280 290 300
pF1KE4 FHKACIDPWLLAHRTCPMCKCDILKT
:::.:.::::: :::::::::::::
NP_919 FHKTCVDPWLLEHRTCPMCKCDILKALGIEVDVEDGSVSLQVPVSNEISNSASSHEEDNR
300 310 320 330 340 350
>>XP_016861149 (OMIM: 609247) PREDICTED: E3 ubiquitin-pr (250 aa)
initn: 228 init1: 156 opt: 242 Z-score: 244.0 bits: 52.9 E(85289): 7.5e-07
Smith-Waterman score: 242; 33.3% identity (60.5% similar) in 114 aa overlap (193-305:52-157)
170 180 190 200 210 220
pF1KE4 ILHSIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFT
::. :: . . : .. .: : .
XP_016 SSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHR
30 40 50 60 70 80
230 240 250 260 270 280
pF1KE4 RRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHK
::.... : : .: .. .:.::: : :..:.: :. : .::: :.: .:
XP_016 ARRNRLRKDQLK---KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHC
90 100 110 120 130
290 300
pF1KE4 ACIDPWLL-AHRTCPMCKCDILKT
:.:::: ...:::.:: .. .
XP_016 KCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFG
140 150 160 170 180 190
>>XP_016861147 (OMIM: 609247) PREDICTED: E3 ubiquitin-pr (262 aa)
initn: 228 init1: 156 opt: 242 Z-score: 243.7 bits: 53.0 E(85289): 7.8e-07
Smith-Waterman score: 242; 33.3% identity (60.5% similar) in 114 aa overlap (193-305:64-169)
170 180 190 200 210 220
pF1KE4 ILHSIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFT
::. :: . . : .. .: : .
XP_016 SSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHR
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 RRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHK
::.... : : .: .. .:.::: : :..:.: :. : .::: :.: .:
XP_016 ARRNRLRKDQLK---KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHC
100 110 120 130 140
290 300
pF1KE4 ACIDPWLL-AHRTCPMCKCDILKT
:.:::: ...:::.:: .. .
XP_016 KCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFG
150 160 170 180 190 200
>>XP_005247149 (OMIM: 609247) PREDICTED: E3 ubiquitin-pr (262 aa)
initn: 228 init1: 156 opt: 242 Z-score: 243.7 bits: 53.0 E(85289): 7.8e-07
Smith-Waterman score: 242; 33.3% identity (60.5% similar) in 114 aa overlap (193-305:64-169)
170 180 190 200 210 220
pF1KE4 ILHSIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFT
::. :: . . : .. .: : .
XP_005 SSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHR
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 RRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHK
::.... : : .: .. .:.::: : :..:.: :. : .::: :.: .:
XP_005 ARRNRLRKDQLK---KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHC
100 110 120 130 140
290 300
pF1KE4 ACIDPWLL-AHRTCPMCKCDILKT
:.:::: ...:::.:: .. .
XP_005 KCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFG
150 160 170 180 190 200
>>XP_016861148 (OMIM: 609247) PREDICTED: E3 ubiquitin-pr (262 aa)
initn: 228 init1: 156 opt: 242 Z-score: 243.7 bits: 53.0 E(85289): 7.8e-07
Smith-Waterman score: 242; 33.3% identity (60.5% similar) in 114 aa overlap (193-305:64-169)
170 180 190 200 210 220
pF1KE4 ILHSIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFT
::. :: . . : .. .: : .
XP_016 SSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHR
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 RRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHK
::.... : : .: .. .:.::: : :..:.: :. : .::: :.: .:
XP_016 ARRNRLRKDQLK---KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHC
100 110 120 130 140
290 300
pF1KE4 ACIDPWLL-AHRTCPMCKCDILKT
:.:::: ...:::.:: .. .
XP_016 KCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFG
150 160 170 180 190 200
>>XP_011510678 (OMIM: 609247) PREDICTED: E3 ubiquitin-pr (262 aa)
initn: 228 init1: 156 opt: 242 Z-score: 243.7 bits: 53.0 E(85289): 7.8e-07
Smith-Waterman score: 242; 33.3% identity (60.5% similar) in 114 aa overlap (193-305:64-169)
170 180 190 200 210 220
pF1KE4 ILHSIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFT
::. :: . . : .. .: : .
XP_011 SSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHR
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 RRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHK
::.... : : .: .. .:.::: : :..:.: :. : .::: :.: .:
XP_011 ARRNRLRKDQLK---KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHC
100 110 120 130 140
290 300
pF1KE4 ACIDPWLL-AHRTCPMCKCDILKT
:.:::: ...:::.:: .. .
XP_011 KCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFG
150 160 170 180 190 200
>>XP_016861145 (OMIM: 609247) PREDICTED: E3 ubiquitin-pr (262 aa)
initn: 228 init1: 156 opt: 242 Z-score: 243.7 bits: 53.0 E(85289): 7.8e-07
Smith-Waterman score: 242; 33.3% identity (60.5% similar) in 114 aa overlap (193-305:64-169)
170 180 190 200 210 220
pF1KE4 ILHSIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFT
::. :: . . : .. .: : .
XP_016 SSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHR
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 RRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHK
::.... : : .: .. .:.::: : :..:.: :. : .::: :.: .:
XP_016 ARRNRLRKDQLK---KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHC
100 110 120 130 140
290 300
pF1KE4 ACIDPWLL-AHRTCPMCKCDILKT
:.:::: ...:::.:: .. .
XP_016 KCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFG
150 160 170 180 190 200
>>XP_016861146 (OMIM: 609247) PREDICTED: E3 ubiquitin-pr (262 aa)
initn: 228 init1: 156 opt: 242 Z-score: 243.7 bits: 53.0 E(85289): 7.8e-07
Smith-Waterman score: 242; 33.3% identity (60.5% similar) in 114 aa overlap (193-305:64-169)
170 180 190 200 210 220
pF1KE4 ILHSIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFT
::. :: . . : .. .: : .
XP_016 SSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHR
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 RRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHK
::.... : : .: .. .:.::: : :..:.: :. : .::: :.: .:
XP_016 ARRNRLRKDQLK---KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHC
100 110 120 130 140
290 300
pF1KE4 ACIDPWLL-AHRTCPMCKCDILKT
:.:::: ...:::.:: .. .
XP_016 KCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFG
150 160 170 180 190 200
>>XP_016861143 (OMIM: 609247) PREDICTED: E3 ubiquitin-pr (381 aa)
initn: 251 init1: 156 opt: 242 Z-score: 241.7 bits: 53.1 E(85289): 1e-06
Smith-Waterman score: 314; 25.3% identity (56.2% similar) in 304 aa overlap (14-305:3-288)
10 20 30 40 50
pF1KE4 MSFLRITPSTHSSVSSGLLRLS---IFLLLS---FPDSNGKAIWTAHLNITFQVGNEITS
.: :.: :: .. .:. : : . . : .:. ... .
XP_016 MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFD
10 20 30 40
60 70 80 90 100 110
pF1KE4 ELGESGVFGNHSPLERVSGVVALPEGWNQNACHPLTNFS-RPKQADSWLALIERGGCTFT
.: . :: . : : ..: : .. .:::.:.. . ... ....::.: :.:
XP_016 DL--PARFGYRLPAEGLKGF--LINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFD
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE4 HKINVAAEKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYV
:. : . : ...:..: .. . .:...: .. .. .. : .: ...
XP_016 IKVLNAQRAGYKAAIVHNVDSD-----DLISMGSNDIEVLKKIDIPSVFIGESSANSLKD
110 120 130 140 150 160
180 190 200 210 220
pF1KE4 TVIIEVGRMHMQWVSHYIM----YLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIK
: : :. : .. . ::. :: . . : .. .: : . ::....
XP_016 EFTYEKGG-HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLR
170 180 190 200 210
230 240 250 260 270 280
pF1KE4 TDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWL
: : .: .. .:.::: : :..:.: :. : .::: :.: .: :.::::
XP_016 KDQLK---KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL
220 230 240 250 260 270
290 300
pF1KE4 L-AHRTCPMCKCDILKT
...:::.:: .. .
XP_016 TKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSESRS
280 290 300 310 320 330
305 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 04:06:26 2016 done: Sun Nov 6 04:06:27 2016
Total Scan time: 6.710 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]