Result of FASTA (omim) for
pFN21AE4026
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4026, 234 aa
1>>>pF1KE4026 234 - 234 aa - 234 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9944+/-0.000318; mu= 16.5944+/- 0.020
mean_var=71.8873+/-14.339, 0's: 0 Z-trim(116.7): 105 B-trim: 177 in 1/57
Lambda= 0.151268
statistics sampled from 27980 (28090) to 27980 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.709), E-opt: 0.2 (0.329), width: 16
Scan time: 5.010
The best scores are: opt bits E(85289)
NP_061865 (OMIM: 611285) BTB/POZ domain-containing ( 234) 1568 350.8 1.2e-96
NP_056168 (OMIM: 613422) BTB/POZ domain-containing ( 263) 1090 246.5 3.2e-65
NP_001269615 (OMIM: 616386,616398) BTB/POZ domain- ( 220) 1038 235.1 7.4e-62
NP_001269614 (OMIM: 616386,616398) BTB/POZ domain- ( 225) 998 226.4 3.2e-59
NP_078957 (OMIM: 616386,616398) BTB/POZ domain-con ( 297) 999 226.7 3.4e-59
XP_005261801 (OMIM: 616386,616398) PREDICTED: BTB/ ( 315) 999 226.7 3.5e-59
NP_001269613 (OMIM: 616386,616398) BTB/POZ domain- ( 321) 999 226.7 3.6e-59
XP_005261800 (OMIM: 616386,616398) PREDICTED: BTB/ ( 328) 999 226.7 3.6e-59
XP_005261798 (OMIM: 616386,616398) PREDICTED: BTB/ ( 352) 999 226.8 3.8e-59
XP_005261799 (OMIM: 616386,616398) PREDICTED: BTB/ ( 352) 999 226.8 3.8e-59
XP_011528679 (OMIM: 616386,616398) PREDICTED: BTB/ ( 249) 994 225.6 6.3e-59
XP_011528676 (OMIM: 616386,616398) PREDICTED: BTB/ ( 370) 994 225.7 8.5e-59
XP_011522877 (OMIM: 613422) PREDICTED: BTB/POZ dom ( 226) 816 186.7 2.9e-47
NP_001306223 (OMIM: 613272) BTB/POZ domain-contain ( 813) 235 60.3 1.1e-08
NP_057205 (OMIM: 613272) BTB/POZ domain-containing ( 815) 235 60.3 1.1e-08
XP_011535975 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 286) 222 57.1 3.6e-08
XP_011535974 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 304) 222 57.1 3.8e-08
XP_006714852 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 222 57.3 4.9e-08
XP_005268550 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 222 57.3 4.9e-08
XP_011535973 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 222 57.3 4.9e-08
NP_065819 (OMIM: 613423) BTB/POZ domain-containing ( 428) 222 57.3 4.9e-08
XP_005268549 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 222 57.3 4.9e-08
NP_612453 (OMIM: 610521) BTB/POZ domain-containing ( 325) 202 52.8 8.2e-07
NP_066960 (OMIM: 191161) BTB/POZ domain-containing ( 316) 201 52.6 9.4e-07
XP_016880482 (OMIM: 191161) PREDICTED: BTB/POZ dom ( 391) 201 52.7 1.1e-06
NP_001304328 (OMIM: 613421) BTB/POZ domain-contain ( 290) 192 50.6 3.4e-06
NP_114160 (OMIM: 613421) BTB/POZ domain-containing ( 313) 192 50.6 3.6e-06
NP_001304324 (OMIM: 613421) BTB/POZ domain-contain ( 314) 190 50.2 4.9e-06
NP_758857 (OMIM: 607603) potassium voltage-gated c ( 519) 192 50.8 5.3e-06
NP_001161433 (OMIM: 611725,611726) BTB/POZ domain- ( 288) 175 46.9 4.5e-05
NP_694578 (OMIM: 611725,611726) BTB/POZ domain-con ( 289) 175 46.9 4.5e-05
NP_849194 (OMIM: 608947) BTB/POZ domain-containing ( 329) 175 46.9 4.9e-05
NP_076981 (OMIM: 615240) BTB/POZ domain-containing ( 234) 172 46.1 6e-05
NP_001123467 (OMIM: 615240) BTB/POZ domain-contain ( 283) 172 46.2 6.9e-05
NP_001123466 (OMIM: 615240) BTB/POZ domain-contain ( 283) 172 46.2 6.9e-05
XP_016882772 (OMIM: 615240) PREDICTED: BTB/POZ dom ( 283) 172 46.2 6.9e-05
XP_011525599 (OMIM: 615240) PREDICTED: BTB/POZ dom ( 283) 172 46.2 6.9e-05
XP_011525600 (OMIM: 615240) PREDICTED: BTB/POZ dom ( 283) 172 46.2 6.9e-05
XP_016878594 (OMIM: 608947) PREDICTED: BTB/POZ dom ( 175) 167 45.0 0.0001
XP_016878595 (OMIM: 608947) PREDICTED: BTB/POZ dom ( 173) 166 44.7 0.00012
NP_001129677 (OMIM: 181270,613420) BTB/POZ domain- ( 257) 166 44.9 0.00016
NP_945342 (OMIM: 181270,613420) BTB/POZ domain-con ( 257) 166 44.9 0.00016
XP_016881197 (OMIM: 181270,613420) PREDICTED: BTB/ ( 257) 166 44.9 0.00016
NP_001245150 (OMIM: 181270,613420) BTB/POZ domain- ( 257) 166 44.9 0.00016
NP_001245151 (OMIM: 181270,613420) BTB/POZ domain- ( 265) 166 44.9 0.00016
XP_011544085 (OMIM: 608947) PREDICTED: BTB/POZ dom ( 347) 166 45.0 0.0002
NP_001136202 (OMIM: 181270,613420) BTB/POZ domain- ( 865) 166 45.3 0.0004
XP_016859548 (OMIM: 603888) PREDICTED: potassium v ( 491) 159 43.6 0.00075
NP_002243 (OMIM: 603888) potassium voltage-gated c ( 491) 159 43.6 0.00075
NP_001269357 (OMIM: 603888) potassium voltage-gate ( 491) 159 43.6 0.00075
>>NP_061865 (OMIM: 611285) BTB/POZ domain-containing pro (234 aa)
initn: 1568 init1: 1568 opt: 1568 Z-score: 1856.3 bits: 350.8 E(85289): 1.2e-96
Smith-Waterman score: 1568; 100.0% identity (100.0% similar) in 234 aa overlap (1-234:1-234)
10 20 30 40 50 60
pF1KE4 MAENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 MAENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 TLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 TLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 GVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 GVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWK
130 140 150 160 170 180
190 200 210 220 230
pF1KE4 FEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 FEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
190 200 210 220 230
>>NP_056168 (OMIM: 613422) BTB/POZ domain-containing pro (263 aa)
initn: 962 init1: 925 opt: 1090 Z-score: 1291.8 bits: 246.5 E(85289): 3.2e-65
Smith-Waterman score: 1090; 82.1% identity (94.9% similar) in 196 aa overlap (40-234:68-263)
10 20 30 40 50 60
pF1KE4 SPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTLCRDPKSF
:....:::::::::::.:::::: :.::::
NP_056 GPTPRGHGRPAAAVAQPLEPGPGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSF
40 50 60 70 80 90
70 80 90 100 110 120
pF1KE4 LYRLC-QADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEF
: ::: : ::.::::::::::::::::::::::.:::::::::.:.:.::::::::::::
NP_056 LCRLCCQEDPELDSDKDETGAYLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEF
100 110 120 130 140 150
130 140 150 160 170 180
pF1KE4 YNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLVSIG
:::.::..:::..::. ...::: ::::::::::::::::::::::::::::::::.:::
NP_056 YNIASLVRLVKERIRDNENRTSQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIG
160 170 180 190 200 210
190 200 210 220 230
pF1KE4 SSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
::::::::::::::::::.::.:. : . ::::::::::::::::
NP_056 SSYNYGNEDQAEFLCVVSRELNNSTNGIVIEPSEKAKILQERGSRM
220 230 240 250 260
>>NP_001269615 (OMIM: 616386,616398) BTB/POZ domain-cont (220 aa)
initn: 1036 init1: 844 opt: 1038 Z-score: 1231.6 bits: 235.1 E(85289): 7.4e-62
Smith-Waterman score: 1038; 75.2% identity (91.6% similar) in 202 aa overlap (33-234:20-220)
10 20 30 40 50 60
pF1KE4 ENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTL
:: .. :. .:::::::::: ::::::::
NP_001 MQTPRPAMRMEAGEAAPPAGAGGRAAGGWGKWVRLNVGGTVFLTTRQTL
10 20 30 40
70 80 90 100 110 120
pF1KE4 CRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGV
::. :::: ::::.. .:.::.:::::::::::::::::.::.:::::::..::.:::::
NP_001 CREQKSFLSRLCQGE-ELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 LEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFE
::::::::: ::...::...:.: ..::: :::::::::::::::::::::::::.::
NP_001 LEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFE
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 QLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
:::.::::::::.:::::::::::::::.:: : .:: :.:.:.:: ::.::
NP_001 QLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKLLQARGTRM
170 180 190 200 210 220
>>NP_001269614 (OMIM: 616386,616398) BTB/POZ domain-cont (225 aa)
initn: 989 init1: 797 opt: 998 Z-score: 1184.3 bits: 226.4 E(85289): 3.2e-59
Smith-Waterman score: 998; 75.3% identity (91.8% similar) in 194 aa overlap (33-226:20-212)
10 20 30 40 50 60
pF1KE4 ENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTL
:: .. :. .:::::::::: ::::::::
NP_001 MQTPRPAMRMEAGEAAPPAGAGGRAAGGWGKWVRLNVGGTVFLTTRQTL
10 20 30 40
70 80 90 100 110 120
pF1KE4 CRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGV
::. :::: ::::.. .:.::.:::::::::::::::::.::.:::::::..::.:::::
NP_001 CREQKSFLSRLCQGE-ELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 LEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFE
::::::::: ::...::...:.: ..::: :::::::::::::::::::::::::.::
NP_001 LEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFE
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 QLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
:::.::::::::.:::::::::::::::.:: : .:: :.:.:.
NP_001 QLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKVPVRTLSDLRLSLQ
170 180 190 200 210 220
>>NP_078957 (OMIM: 616386,616398) BTB/POZ domain-contain (297 aa)
initn: 1030 init1: 798 opt: 999 Z-score: 1183.8 bits: 226.7 E(85289): 3.4e-59
Smith-Waterman score: 999; 74.2% identity (90.9% similar) in 198 aa overlap (33-230:20-216)
10 20 30 40 50 60
pF1KE4 ENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTL
:: .. :. .:::::::::: ::::::::
NP_078 MQTPRPAMRMEAGEAAPPAGAGGRAAGGWGKWVRLNVGGTVFLTTRQTL
10 20 30 40
70 80 90 100 110 120
pF1KE4 CRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGV
::. :::: ::::.. .:.::.:::::::::::::::::.::.:::::::..::.:::::
NP_078 CREQKSFLSRLCQGE-ELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 LEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFE
::::::::: ::...::...:.: ..::: :::::::::::::::::::::::::.::
NP_078 LEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFE
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 QLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
:::.::::::::.:::::::::::::::.:: : .:: :.:.: .:.
NP_078 QLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQLEEQQQQEEEVE
170 180 190 200 210 220
NP_078 EVEVEQVQVEADAQEKGSRPHPLRPEAELAVRASPRPLARPQSCHPCCYKPEAPGCEAPD
230 240 250 260 270 280
>>XP_005261801 (OMIM: 616386,616398) PREDICTED: BTB/POZ (315 aa)
initn: 1008 init1: 798 opt: 999 Z-score: 1183.5 bits: 226.7 E(85289): 3.5e-59
Smith-Waterman score: 999; 74.2% identity (90.9% similar) in 198 aa overlap (33-230:20-216)
10 20 30 40 50 60
pF1KE4 ENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTL
:: .. :. .:::::::::: ::::::::
XP_005 MQTPRPAMRMEAGEAAPPAGAGGRAAGGWGKWVRLNVGGTVFLTTRQTL
10 20 30 40
70 80 90 100 110 120
pF1KE4 CRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGV
::. :::: ::::.. .:.::.:::::::::::::::::.::.:::::::..::.:::::
XP_005 CREQKSFLSRLCQGE-ELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 LEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFE
::::::::: ::...::...:.: ..::: :::::::::::::::::::::::::.::
XP_005 LEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFE
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 QLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
:::.::::::::.:::::::::::::::.:: : .:: :.:.: .:.
XP_005 QLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQLEEQQQQEEEVE
170 180 190 200 210 220
XP_005 EVEVEQVQVEADAQEKAVTSQRHPDVRPQITSRDLGFPSEILYFCTMGWAPGLRRKKHPL
230 240 250 260 270 280
>>NP_001269613 (OMIM: 616386,616398) BTB/POZ domain-cont (321 aa)
initn: 1008 init1: 798 opt: 999 Z-score: 1183.3 bits: 226.7 E(85289): 3.6e-59
Smith-Waterman score: 999; 74.2% identity (90.9% similar) in 198 aa overlap (33-230:20-216)
10 20 30 40 50 60
pF1KE4 ENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTL
:: .. :. .:::::::::: ::::::::
NP_001 MQTPRPAMRMEAGEAAPPAGAGGRAAGGWGKWVRLNVGGTVFLTTRQTL
10 20 30 40
70 80 90 100 110 120
pF1KE4 CRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGV
::. :::: ::::.. .:.::.:::::::::::::::::.::.:::::::..::.:::::
NP_001 CREQKSFLSRLCQGE-ELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 LEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFE
::::::::: ::...::...:.: ..::: :::::::::::::::::::::::::.::
NP_001 LEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFE
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 QLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
:::.::::::::.:::::::::::::::.:: : .:: :.:.: .:.
NP_001 QLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQLEEQQQQEEEVE
170 180 190 200 210 220
NP_001 EVEVEQVQVEADAQEKAQSSQDPANLFSLPPLPPPPLPAGGSRPHPLRPEAELAVRASPR
230 240 250 260 270 280
>>XP_005261800 (OMIM: 616386,616398) PREDICTED: BTB/POZ (328 aa)
initn: 1030 init1: 798 opt: 999 Z-score: 1183.2 bits: 226.7 E(85289): 3.6e-59
Smith-Waterman score: 999; 74.2% identity (90.9% similar) in 198 aa overlap (33-230:20-216)
10 20 30 40 50 60
pF1KE4 ENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTL
:: .. :. .:::::::::: ::::::::
XP_005 MQTPRPAMRMEAGEAAPPAGAGGRAAGGWGKWVRLNVGGTVFLTTRQTL
10 20 30 40
70 80 90 100 110 120
pF1KE4 CRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGV
::. :::: ::::.. .:.::.:::::::::::::::::.::.:::::::..::.:::::
XP_005 CREQKSFLSRLCQGE-ELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 LEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFE
::::::::: ::...::...:.: ..::: :::::::::::::::::::::::::.::
XP_005 LEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFE
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 QLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
:::.::::::::.:::::::::::::::.:: : .:: :.:.: .:.
XP_005 QLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQLEEQQQQEEEVE
170 180 190 200 210 220
XP_005 EVEVEQVQVEADAQEKGSRPHPLRPEAELAVRASPRPLARPQSCHPWFVAWRCWREGWSE
230 240 250 260 270 280
>>XP_005261798 (OMIM: 616386,616398) PREDICTED: BTB/POZ (352 aa)
initn: 1008 init1: 798 opt: 999 Z-score: 1182.8 bits: 226.8 E(85289): 3.8e-59
Smith-Waterman score: 999; 74.2% identity (90.9% similar) in 198 aa overlap (33-230:20-216)
10 20 30 40 50 60
pF1KE4 ENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTL
:: .. :. .:::::::::: ::::::::
XP_005 MQTPRPAMRMEAGEAAPPAGAGGRAAGGWGKWVRLNVGGTVFLTTRQTL
10 20 30 40
70 80 90 100 110 120
pF1KE4 CRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGV
::. :::: ::::.. .:.::.:::::::::::::::::.::.:::::::..::.:::::
XP_005 CREQKSFLSRLCQGE-ELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 LEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFE
::::::::: ::...::...:.: ..::: :::::::::::::::::::::::::.::
XP_005 LEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFE
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 QLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
:::.::::::::.:::::::::::::::.:: : .:: :.:.: .:.
XP_005 QLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQLEEQQQQEEEVE
170 180 190 200 210 220
XP_005 EVEVEQVQVEADAQEKAQSSQDPANLFSLPPLPPPPLPAGGPASSSSTSSSSWISSAPCL
230 240 250 260 270 280
>>XP_005261799 (OMIM: 616386,616398) PREDICTED: BTB/POZ (352 aa)
initn: 1008 init1: 798 opt: 999 Z-score: 1182.8 bits: 226.8 E(85289): 3.8e-59
Smith-Waterman score: 999; 74.2% identity (90.9% similar) in 198 aa overlap (33-230:20-216)
10 20 30 40 50 60
pF1KE4 ENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTL
:: .. :. .:::::::::: ::::::::
XP_005 MQTPRPAMRMEAGEAAPPAGAGGRAAGGWGKWVRLNVGGTVFLTTRQTL
10 20 30 40
70 80 90 100 110 120
pF1KE4 CRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGV
::. :::: ::::.. .:.::.:::::::::::::::::.::.:::::::..::.:::::
XP_005 CREQKSFLSRLCQGE-ELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 LEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFE
::::::::: ::...::...:.: ..::: :::::::::::::::::::::::::.::
XP_005 LEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFE
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 QLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTASEPSEKAKILQERGSRM
:::.::::::::.:::::::::::::::.:: : .:: :.:.: .:.
XP_005 QLVNIGSSYNYGSEDQAEFLCVVSKELHSTPNGLSSESSRKTKSTEEQLEEQQQQEEEVE
170 180 190 200 210 220
XP_005 EVEVEQVQVEADAQEKAQSSQDPANLFSLPPLPPPPLPAGGSRPHPLRPEAELAVRASPR
230 240 250 260 270 280
234 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 04:19:45 2016 done: Sun Nov 6 04:19:46 2016
Total Scan time: 5.010 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]