Result of FASTA (omim) for
pFN21AE3986
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3986, 319 aa
1>>>pF1KE3986 319 - 319 aa - 319 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9285+/-0.00039; mu= 18.0486+/- 0.024
mean_var=78.2791+/-16.328, 0's: 0 Z-trim(112.6): 133 B-trim: 0 in 0/49
Lambda= 0.144961
statistics sampled from 21444 (21585) to 21444 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.253), width: 16
Scan time: 6.220
The best scores are: opt bits E(85289)
NP_036312 (OMIM: 605649) F-box only protein 8 [Hom ( 319) 2169 463.3 2.9e-130
XP_016863509 (OMIM: 605649) PREDICTED: F-box only ( 172) 1130 245.8 4.8e-65
NP_055890 (OMIM: 300522,300551,309530) IQ motif an ( 949) 381 89.9 2.3e-17
XP_011529079 (OMIM: 300522,300551,309530) PREDICTE (1126) 381 89.9 2.6e-17
XP_011529078 (OMIM: 300522,300551,309530) PREDICTE (1130) 381 89.9 2.6e-17
XP_006724647 (OMIM: 300522,300551,309530) PREDICTE (1186) 381 90.0 2.7e-17
XP_006724646 (OMIM: 300522,300551,309530) PREDICTE (1200) 381 90.0 2.7e-17
XP_006724645 (OMIM: 300522,300551,309530) PREDICTE (1212) 381 90.0 2.7e-17
XP_011529076 (OMIM: 300522,300551,309530) PREDICTE (1222) 381 90.0 2.7e-17
XP_006724644 (OMIM: 300522,300551,309530) PREDICTE (1244) 381 90.0 2.8e-17
XP_011529075 (OMIM: 300522,300551,309530) PREDICTE (1251) 381 90.0 2.8e-17
XP_006724643 (OMIM: 300522,300551,309530) PREDICTE (1283) 381 90.0 2.8e-17
XP_016884849 (OMIM: 300522,300551,309530) PREDICTE (1322) 381 90.0 2.9e-17
XP_016884848 (OMIM: 300522,300551,309530) PREDICTE (1478) 381 90.0 3.1e-17
NP_001104595 (OMIM: 300522,300551,309530) IQ motif (1488) 381 90.0 3.2e-17
XP_006724642 (OMIM: 300522,300551,309530) PREDICTE (1520) 381 90.1 3.2e-17
XP_011532617 (OMIM: 610166) PREDICTED: IQ motif an ( 814) 376 88.8 4.2e-17
NP_001317548 (OMIM: 610166) IQ motif and SEC7 doma ( 814) 376 88.8 4.2e-17
NP_055684 (OMIM: 610166) IQ motif and SEC7 domain- ( 963) 376 88.8 4.8e-17
XP_011532615 (OMIM: 610166) PREDICTED: IQ motif an (1006) 376 88.8 4.9e-17
XP_011532616 (OMIM: 610166) PREDICTED: IQ motif an (1006) 376 88.8 4.9e-17
XP_011532614 (OMIM: 610166) PREDICTED: IQ motif an (1006) 376 88.8 4.9e-17
XP_011532613 (OMIM: 610166) PREDICTED: IQ motif an (1006) 376 88.8 4.9e-17
XP_011532612 (OMIM: 610166) PREDICTED: IQ motif an (1030) 376 88.9 5e-17
NP_001127854 (OMIM: 610166) IQ motif and SEC7 doma (1114) 376 88.9 5.3e-17
XP_011532610 (OMIM: 610166) PREDICTED: IQ motif an (1128) 376 88.9 5.4e-17
XP_011532608 (OMIM: 610166) PREDICTED: IQ motif an (1129) 376 88.9 5.4e-17
XP_011532609 (OMIM: 610166) PREDICTED: IQ motif an (1129) 376 88.9 5.4e-17
XP_011532607 (OMIM: 610166) PREDICTED: IQ motif an (1132) 376 88.9 5.4e-17
XP_016863071 (OMIM: 610166) PREDICTED: IQ motif an (1207) 376 88.9 5.6e-17
XP_016863070 (OMIM: 610166) PREDICTED: IQ motif an (1212) 376 88.9 5.6e-17
XP_011532606 (OMIM: 610166) PREDICTED: IQ motif an (1222) 376 88.9 5.7e-17
NP_056047 (OMIM: 612118) IQ motif and SEC7 domain- ( 759) 370 87.5 9.6e-17
XP_011519263 (OMIM: 612118) PREDICTED: IQ motif an ( 879) 370 87.5 1.1e-16
XP_016874800 (OMIM: 612118) PREDICTED: IQ motif an (1041) 370 87.6 1.2e-16
XP_016874799 (OMIM: 612118) PREDICTED: IQ motif an (1041) 370 87.6 1.2e-16
XP_011519261 (OMIM: 612118) PREDICTED: IQ motif an (1062) 370 87.6 1.2e-16
XP_011519262 (OMIM: 612118) PREDICTED: IQ motif an (1062) 370 87.6 1.2e-16
XP_011519260 (OMIM: 612118) PREDICTED: IQ motif an (1063) 370 87.6 1.2e-16
NP_001164209 (OMIM: 612118) IQ motif and SEC7 doma (1182) 370 87.7 1.3e-16
XP_006723536 (OMIM: 602488) PREDICTED: cytohesin-2 ( 394) 319 76.5 9.8e-14
NP_004219 (OMIM: 602488) cytohesin-2 isoform 2 [Ho ( 399) 319 76.5 9.9e-14
NP_059431 (OMIM: 602488) cytohesin-2 isoform 1 [Ho ( 400) 319 76.5 9.9e-14
XP_006723535 (OMIM: 602488) PREDICTED: cytohesin-2 ( 421) 319 76.6 1e-13
XP_011515744 (OMIM: 604141) PREDICTED: brefeldin A (1649) 324 78.2 1.3e-13
XP_005251193 (OMIM: 604141) PREDICTED: brefeldin A (1800) 324 78.2 1.4e-13
XP_005251192 (OMIM: 604141) PREDICTED: brefeldin A (1843) 324 78.2 1.4e-13
NP_006412 (OMIM: 604141) brefeldin A-inhibited gua (1849) 324 78.2 1.4e-13
XP_005251191 (OMIM: 604141) PREDICTED: brefeldin A (1849) 324 78.2 1.4e-13
NP_004218 (OMIM: 605081) cytohesin-3 [Homo sapiens ( 399) 301 72.8 1.3e-12
>>NP_036312 (OMIM: 605649) F-box only protein 8 [Homo sa (319 aa)
initn: 2169 init1: 2169 opt: 2169 Z-score: 2459.7 bits: 463.3 E(85289): 2.9e-130
Smith-Waterman score: 2169; 100.0% identity (100.0% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE3 MGQGLWRVVRNQQLQQEGYSEQGYLTREQSRRMAASNISNTNHRKQVQGGIDIYHLLKAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MGQGLWRVVRNQQLQQEGYSEQGYLTREQSRRMAASNISNTNHRKQVQGGIDIYHLLKAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KSKEQEGFINLEMLPPELSFTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 KSKEQEGFINLEMLPPELSFTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 IYNKNPPLGFSFRKLYMQLDEGSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 IYNKNPPLGFSFRKLYMQLDEGSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 NWKKLRIYLDERRDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 NWKKLRIYLDERRDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 RFCACNPDLMRELGLSPDAVYVLCYSLILLSIDLTSPHVKNKMSKREFIRNTRRAAQNIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 RFCACNPDLMRELGLSPDAVYVLCYSLILLSIDLTSPHVKNKMSKREFIRNTRRAAQNIS
250 260 270 280 290 300
310
pF1KE3 EDFVGHLYDNIYLIGHVAA
:::::::::::::::::::
NP_036 EDFVGHLYDNIYLIGHVAA
310
>>XP_016863509 (OMIM: 605649) PREDICTED: F-box only prot (172 aa)
initn: 1130 init1: 1130 opt: 1130 Z-score: 1288.8 bits: 245.8 E(85289): 4.8e-65
Smith-Waterman score: 1130; 100.0% identity (100.0% similar) in 168 aa overlap (152-319:5-172)
130 140 150 160 170 180
pF1KE3 YNKNPPLGFSFRKLYMQLDEGSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLN
::::::::::::::::::::::::::::::
XP_016 MVLHEGVNYFMSKGILDDSPKEIAKFIFCTRTLN
10 20 30
190 200 210 220 230 240
pF1KE3 WKKLRIYLDERRDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WKKLRIYLDERRDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHR
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE3 FCACNPDLMRELGLSPDAVYVLCYSLILLSIDLTSPHVKNKMSKREFIRNTRRAAQNISE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FCACNPDLMRELGLSPDAVYVLCYSLILLSIDLTSPHVKNKMSKREFIRNTRRAAQNISE
100 110 120 130 140 150
310
pF1KE3 DFVGHLYDNIYLIGHVAA
::::::::::::::::::
XP_016 DFVGHLYDNIYLIGHVAA
160 170
>>NP_055890 (OMIM: 300522,300551,309530) IQ motif and SE (949 aa)
initn: 335 init1: 117 opt: 381 Z-score: 432.8 bits: 89.9 E(85289): 2.3e-17
Smith-Waterman score: 381; 33.6% identity (66.4% similar) in 214 aa overlap (110-311:523-731)
80 90 100 110 120 130
pF1KE3 FTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFSFRKLYMQL
::::.:. . . .. . : .: . .:
NP_055 SLESSSNSNETINCSSGSSSRDSLREPPATGLCKQTYQRETRHSWDSP---AFNNDVVQR
500 510 520 530 540
140 150 160 170 180 190
pF1KE3 DE---GSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDER----
. : :: .:..:..:.. .:.:.:.: .:.::. . :. . . .: .:
NP_055 RHYRIGLNLFNKKPEKGIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQKQF
550 560 570 580 590 600
200 210 220 230 240 250
pF1KE3 -RDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHRFCACNPDLMR
::::: .: .: .. : .:::.: ::.. : .. .: :: ::.:.:.::: :.:
NP_055 NRDVLDCVVDEMDFSSMDLDDALRKFQSHIRVQGE-AQKVERLIEAFSQRYCVCNPALVR
610 620 630 640 650 660
260 270 280 290 300
pF1KE3 ELGLSPDAVYVLCYSLILLSIDLTSPHVKN--KMSKREFIRNTRRA--AQNISEDFVGHL
.. .::....: ...:::. :. :: :: ::. .::.: : . ...: .:.. .
NP_055 QFR-NPDTIFILAFAIILLNTDMYSPSVKAERKMKLDDFIKNLRGVDNGEDIPRDLLVGI
670 680 690 700 710 720
310
pF1KE3 YDNIYLIGHVAA
:. :
NP_055 YQRIQGRELRTNDDHVSQVQAVERMIVGKKPVLSLPHRRLVCCCQLYEVPDPNRPQRLGL
730 740 750 760 770 780
>>XP_011529079 (OMIM: 300522,300551,309530) PREDICTED: I (1126 aa)
initn: 335 init1: 117 opt: 381 Z-score: 431.8 bits: 89.9 E(85289): 2.6e-17
Smith-Waterman score: 381; 33.6% identity (66.4% similar) in 214 aa overlap (110-311:760-968)
80 90 100 110 120 130
pF1KE3 FTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFSFRKLYMQL
::::.:. . . .. . : .: . .:
XP_011 SLESSSNSNETINCSSGSSSRDSLREPPATGLCKQTYQRETRHSWDSP---AFNNDVVQR
730 740 750 760 770 780
140 150 160 170 180 190
pF1KE3 DE---GSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDER----
. : :: .:..:..:.. .:.:.:.: .:.::. . :. . . .: .:
XP_011 RHYRIGLNLFNKKPEKGIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQKQF
790 800 810 820 830 840
200 210 220 230 240 250
pF1KE3 -RDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHRFCACNPDLMR
::::: .: .: .. : .:::.: ::.. : .. .: :: ::.:.:.::: :.:
XP_011 NRDVLDCVVDEMDFSSMDLDDALRKFQSHIRVQGE-AQKVERLIEAFSQRYCVCNPALVR
850 860 870 880 890 900
260 270 280 290 300
pF1KE3 ELGLSPDAVYVLCYSLILLSIDLTSPHVKN--KMSKREFIRNTRRA--AQNISEDFVGHL
.. .::....: ...:::. :. :: :: ::. .::.: : . ...: .:.. .
XP_011 QFR-NPDTIFILAFAIILLNTDMYSPSVKAERKMKLDDFIKNLRGVDNGEDIPRDLLVGI
910 920 930 940 950 960
310
pF1KE3 YDNIYLIGHVAA
:. :
XP_011 YQRIQGRELRTNDDHVSQVQAVERMIVGKKPVLSLPHRRLVCCCQLYEVPDPNRPQRLGL
970 980 990 1000 1010 1020
>>XP_011529078 (OMIM: 300522,300551,309530) PREDICTED: I (1130 aa)
initn: 335 init1: 117 opt: 381 Z-score: 431.8 bits: 89.9 E(85289): 2.6e-17
Smith-Waterman score: 381; 33.6% identity (66.4% similar) in 214 aa overlap (110-311:760-968)
80 90 100 110 120 130
pF1KE3 FTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFSFRKLYMQL
::::.:. . . .. . : .: . .:
XP_011 SLESSSNSNETINCSSGSSSRDSLREPPATGLCKQTYQRETRHSWDSP---AFNNDVVQR
730 740 750 760 770 780
140 150 160 170 180 190
pF1KE3 DE---GSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDER----
. : :: .:..:..:.. .:.:.:.: .:.::. . :. . . .: .:
XP_011 RHYRIGLNLFNKKPEKGIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQKQF
790 800 810 820 830 840
200 210 220 230 240 250
pF1KE3 -RDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHRFCACNPDLMR
::::: .: .: .. : .:::.: ::.. : .. .: :: ::.:.:.::: :.:
XP_011 NRDVLDCVVDEMDFSSMDLDDALRKFQSHIRVQGE-AQKVERLIEAFSQRYCVCNPALVR
850 860 870 880 890 900
260 270 280 290 300
pF1KE3 ELGLSPDAVYVLCYSLILLSIDLTSPHVKN--KMSKREFIRNTRRA--AQNISEDFVGHL
.. .::....: ...:::. :. :: :: ::. .::.: : . ...: .:.. .
XP_011 QFR-NPDTIFILAFAIILLNTDMYSPSVKAERKMKLDDFIKNLRGVDNGEDIPRDLLVGI
910 920 930 940 950 960
310
pF1KE3 YDNIYLIGHVAA
:. :
XP_011 YQRIQGRELRTNDDHVSQVQAVERMIVGKKPVLSLPHRRLVCCCQLYEVPDPNRPQRLGL
970 980 990 1000 1010 1020
>>XP_006724647 (OMIM: 300522,300551,309530) PREDICTED: I (1186 aa)
initn: 335 init1: 117 opt: 381 Z-score: 431.5 bits: 90.0 E(85289): 2.7e-17
Smith-Waterman score: 381; 33.6% identity (66.4% similar) in 214 aa overlap (110-311:760-968)
80 90 100 110 120 130
pF1KE3 FTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFSFRKLYMQL
::::.:. . . .. . : .: . .:
XP_006 SLESSSNSNETINCSSGSSSRDSLREPPATGLCKQTYQRETRHSWDSP---AFNNDVVQR
730 740 750 760 770 780
140 150 160 170 180 190
pF1KE3 DE---GSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDER----
. : :: .:..:..:.. .:.:.:.: .:.::. . :. . . .: .:
XP_006 RHYRIGLNLFNKKPEKGIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQKQF
790 800 810 820 830 840
200 210 220 230 240 250
pF1KE3 -RDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHRFCACNPDLMR
::::: .: .: .. : .:::.: ::.. : .. .: :: ::.:.:.::: :.:
XP_006 NRDVLDCVVDEMDFSSMDLDDALRKFQSHIRVQGE-AQKVERLIEAFSQRYCVCNPALVR
850 860 870 880 890 900
260 270 280 290 300
pF1KE3 ELGLSPDAVYVLCYSLILLSIDLTSPHVKN--KMSKREFIRNTRRA--AQNISEDFVGHL
.. .::....: ...:::. :. :: :: ::. .::.: : . ...: .:.. .
XP_006 QFR-NPDTIFILAFAIILLNTDMYSPSVKAERKMKLDDFIKNLRGVDNGEDIPRDLLVGI
910 920 930 940 950 960
310
pF1KE3 YDNIYLIGHVAA
:. :
XP_006 YQRIQGRELRTNDDHVSQVQAVERMIVGKKPVLSLPHRRLVCCCQLYEVPDPNRPQRLGL
970 980 990 1000 1010 1020
>>XP_006724646 (OMIM: 300522,300551,309530) PREDICTED: I (1200 aa)
initn: 335 init1: 117 opt: 381 Z-score: 431.4 bits: 90.0 E(85289): 2.7e-17
Smith-Waterman score: 381; 33.6% identity (66.4% similar) in 214 aa overlap (110-311:760-968)
80 90 100 110 120 130
pF1KE3 FTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFSFRKLYMQL
::::.:. . . .. . : .: . .:
XP_006 SLESSSNSNETINCSSGSSSRDSLREPPATGLCKQTYQRETRHSWDSP---AFNNDVVQR
730 740 750 760 770 780
140 150 160 170 180 190
pF1KE3 DE---GSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDER----
. : :: .:..:..:.. .:.:.:.: .:.::. . :. . . .: .:
XP_006 RHYRIGLNLFNKKPEKGIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQKQF
790 800 810 820 830 840
200 210 220 230 240 250
pF1KE3 -RDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHRFCACNPDLMR
::::: .: .: .. : .:::.: ::.. : .. .: :: ::.:.:.::: :.:
XP_006 NRDVLDCVVDEMDFSSMDLDDALRKFQSHIRVQGE-AQKVERLIEAFSQRYCVCNPALVR
850 860 870 880 890 900
260 270 280 290 300
pF1KE3 ELGLSPDAVYVLCYSLILLSIDLTSPHVKN--KMSKREFIRNTRRA--AQNISEDFVGHL
.. .::....: ...:::. :. :: :: ::. .::.: : . ...: .:.. .
XP_006 QFR-NPDTIFILAFAIILLNTDMYSPSVKAERKMKLDDFIKNLRGVDNGEDIPRDLLVGI
910 920 930 940 950 960
310
pF1KE3 YDNIYLIGHVAA
:. :
XP_006 YQRIQGRELRTNDDHVSQVQAVERMIVGKKPVLSLPHRRLVCCCQLYEVPDPNRPQRLGL
970 980 990 1000 1010 1020
>>XP_006724645 (OMIM: 300522,300551,309530) PREDICTED: I (1212 aa)
initn: 335 init1: 117 opt: 381 Z-score: 431.4 bits: 90.0 E(85289): 2.7e-17
Smith-Waterman score: 381; 33.6% identity (66.4% similar) in 214 aa overlap (110-311:760-968)
80 90 100 110 120 130
pF1KE3 FTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFSFRKLYMQL
::::.:. . . .. . : .: . .:
XP_006 SLESSSNSNETINCSSGSSSRDSLREPPATGLCKQTYQRETRHSWDSP---AFNNDVVQR
730 740 750 760 770 780
140 150 160 170 180 190
pF1KE3 DE---GSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDER----
. : :: .:..:..:.. .:.:.:.: .:.::. . :. . . .: .:
XP_006 RHYRIGLNLFNKKPEKGIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQKQF
790 800 810 820 830 840
200 210 220 230 240 250
pF1KE3 -RDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHRFCACNPDLMR
::::: .: .: .. : .:::.: ::.. : .. .: :: ::.:.:.::: :.:
XP_006 NRDVLDCVVDEMDFSSMDLDDALRKFQSHIRVQGE-AQKVERLIEAFSQRYCVCNPALVR
850 860 870 880 890 900
260 270 280 290 300
pF1KE3 ELGLSPDAVYVLCYSLILLSIDLTSPHVKN--KMSKREFIRNTRRA--AQNISEDFVGHL
.. .::....: ...:::. :. :: :: ::. .::.: : . ...: .:.. .
XP_006 QFR-NPDTIFILAFAIILLNTDMYSPSVKAERKMKLDDFIKNLRGVDNGEDIPRDLLVGI
910 920 930 940 950 960
310
pF1KE3 YDNIYLIGHVAA
:. :
XP_006 YQRIQGRELRTNDDHVSQVQAVERMIVGKKPVLSLPHRRLVCCCQLYEVPDPNRPQRLGL
970 980 990 1000 1010 1020
>>XP_011529076 (OMIM: 300522,300551,309530) PREDICTED: I (1222 aa)
initn: 335 init1: 117 opt: 381 Z-score: 431.3 bits: 90.0 E(85289): 2.7e-17
Smith-Waterman score: 381; 33.6% identity (66.4% similar) in 214 aa overlap (110-311:760-968)
80 90 100 110 120 130
pF1KE3 FTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFSFRKLYMQL
::::.:. . . .. . : .: . .:
XP_011 SLESSSNSNETINCSSGSSSRDSLREPPATGLCKQTYQRETRHSWDSP---AFNNDVVQR
730 740 750 760 770 780
140 150 160 170 180 190
pF1KE3 DE---GSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDER----
. : :: .:..:..:.. .:.:.:.: .:.::. . :. . . .: .:
XP_011 RHYRIGLNLFNKKPEKGIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQKQF
790 800 810 820 830 840
200 210 220 230 240 250
pF1KE3 -RDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHRFCACNPDLMR
::::: .: .: .. : .:::.: ::.. : .. .: :: ::.:.:.::: :.:
XP_011 NRDVLDCVVDEMDFSSMDLDDALRKFQSHIRVQGE-AQKVERLIEAFSQRYCVCNPALVR
850 860 870 880 890 900
260 270 280 290 300
pF1KE3 ELGLSPDAVYVLCYSLILLSIDLTSPHVKN--KMSKREFIRNTRRA--AQNISEDFVGHL
.. .::....: ...:::. :. :: :: ::. .::.: : . ...: .:.. .
XP_011 QFR-NPDTIFILAFAIILLNTDMYSPSVKAERKMKLDDFIKNLRGVDNGEDIPRDLLVGI
910 920 930 940 950 960
310
pF1KE3 YDNIYLIGHVAA
:. :
XP_011 YQRIQGRELRTNDDHVSQVQAVERMIVGKKPVLSLPHRRLVCCCQLYEVPDPNRPQRLGL
970 980 990 1000 1010 1020
>>XP_006724644 (OMIM: 300522,300551,309530) PREDICTED: I (1244 aa)
initn: 335 init1: 117 opt: 381 Z-score: 431.2 bits: 90.0 E(85289): 2.8e-17
Smith-Waterman score: 381; 33.6% identity (66.4% similar) in 214 aa overlap (110-311:760-968)
80 90 100 110 120 130
pF1KE3 FTILSYLNATDLCLASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFSFRKLYMQL
::::.:. . . .. . : .: . .:
XP_006 SLESSSNSNETINCSSGSSSRDSLREPPATGLCKQTYQRETRHSWDSP---AFNNDVVQR
730 740 750 760 770 780
140 150 160 170 180 190
pF1KE3 DE---GSLTFNANPDEGVNYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYLDER----
. : :: .:..:..:.. .:.:.:.: .:.::. . :. . . .: .:
XP_006 RHYRIGLNLFNKKPEKGIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQKQF
790 800 810 820 830 840
200 210 220 230 240 250
pF1KE3 -RDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHRFCACNPDLMR
::::: .: .: .. : .:::.: ::.. : .. .: :: ::.:.:.::: :.:
XP_006 NRDVLDCVVDEMDFSSMDLDDALRKFQSHIRVQGE-AQKVERLIEAFSQRYCVCNPALVR
850 860 870 880 890 900
260 270 280 290 300
pF1KE3 ELGLSPDAVYVLCYSLILLSIDLTSPHVKN--KMSKREFIRNTRRA--AQNISEDFVGHL
.. .::....: ...:::. :. :: :: ::. .::.: : . ...: .:.. .
XP_006 QFR-NPDTIFILAFAIILLNTDMYSPSVKAERKMKLDDFIKNLRGVDNGEDIPRDLLVGI
910 920 930 940 950 960
310
pF1KE3 YDNIYLIGHVAA
:. :
XP_006 YQRIQGRELRTNDDHVSQVQAVERMIVGKKPVLSLPHRRLVCCCQLYEVPDPNRPQRLGL
970 980 990 1000 1010 1020
319 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 08:12:33 2016 done: Sun Nov 6 08:12:34 2016
Total Scan time: 6.220 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]