Result of FASTA (omim) for
pFN21AE3966
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3966, 347 aa
1>>>pF1KE3966 347 - 347 aa - 347 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.8828+/-0.00044; mu= 1.3239+/- 0.027
mean_var=271.0994+/-58.634, 0's: 0 Z-trim(118.6): 177 B-trim: 1483 in 1/54
Lambda= 0.077895
statistics sampled from 31559 (31782) to 31559 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.373), width: 16
Scan time: 8.870
The best scores are: opt bits E(85289)
NP_149083 (OMIM: 608487) tripartite motif-containi ( 347) 2331 275.1 1.6e-73
NP_149084 (OMIM: 608487) tripartite motif-containi ( 326) 2000 237.9 2.4e-62
XP_005253241 (OMIM: 608487) PREDICTED: tripartite ( 326) 2000 237.9 2.4e-62
XP_016873951 (OMIM: 608487) PREDICTED: tripartite ( 300) 1992 236.9 4.2e-62
NP_149023 (OMIM: 608487) tripartite motif-containi ( 493) 1992 237.2 5.9e-62
XP_005253240 (OMIM: 608487) PREDICTED: tripartite ( 493) 1992 237.2 5.9e-62
XP_006718421 (OMIM: 608487) PREDICTED: tripartite ( 265) 1710 205.2 1.3e-52
XP_016873952 (OMIM: 608487) PREDICTED: tripartite ( 265) 1710 205.2 1.3e-52
XP_016873950 (OMIM: 608487) PREDICTED: tripartite ( 310) 1710 205.3 1.5e-52
XP_011518728 (OMIM: 608487) PREDICTED: tripartite ( 310) 1710 205.3 1.5e-52
XP_011518729 (OMIM: 608487) PREDICTED: tripartite ( 271) 1667 200.4 3.9e-51
XP_016873949 (OMIM: 608487) PREDICTED: tripartite ( 314) 1656 199.2 1e-50
NP_477514 (OMIM: 607564) tripartite motif-containi ( 488) 1280 157.1 7.2e-38
NP_001003818 (OMIM: 607564) tripartite motif-conta ( 516) 1280 157.2 7.4e-38
NP_001003827 (OMIM: 605684) tripartite motif-conta ( 488) 1222 150.6 6.6e-36
NP_067629 (OMIM: 605684) tripartite motif-containi ( 488) 1222 150.6 6.6e-36
NP_006065 (OMIM: 606559) E3 ubiquitin-protein liga ( 498) 1193 147.4 6.4e-35
NP_001186502 (OMIM: 606559) E3 ubiquitin-protein l ( 494) 1165 144.2 5.6e-34
NP_569074 (OMIM: 605684) tripartite motif-containi ( 270) 1080 134.4 2.8e-31
NP_003132 (OMIM: 109092) E3 ubiquitin-protein liga ( 475) 830 106.6 1.2e-22
NP_660215 (OMIM: 607868) E3 ubiquitin-protein liga ( 468) 652 86.6 1.2e-16
XP_016857901 (OMIM: 607868) PREDICTED: E3 ubiquiti ( 467) 641 85.3 2.9e-16
NP_060543 (OMIM: 613184) E3 ubiquitin-protein liga ( 485) 604 81.2 5.3e-15
NP_001128327 (OMIM: 606123) E3 ubiquitin-protein l ( 343) 576 77.9 3.7e-14
NP_057186 (OMIM: 606123) E3 ubiquitin-protein liga ( 477) 578 78.2 3.9e-14
XP_011542511 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477) 578 78.2 3.9e-14
XP_006711842 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477) 578 78.2 3.9e-14
NP_001020111 (OMIM: 606123) E3 ubiquitin-protein l ( 477) 578 78.2 3.9e-14
XP_011542512 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477) 578 78.2 3.9e-14
NP_006501 (OMIM: 602165) zinc finger protein RFP [ ( 513) 561 76.4 1.6e-13
XP_011512567 (OMIM: 609316) PREDICTED: E3 ubiquiti ( 421) 558 75.9 1.7e-13
NP_008959 (OMIM: 609316) E3 ubiquitin-protein liga ( 425) 558 75.9 1.7e-13
XP_011512566 (OMIM: 609316) PREDICTED: E3 ubiquiti ( 424) 541 74.0 6.5e-13
NP_439893 (OMIM: 605701) tripartite motif-containi ( 395) 534 73.2 1.1e-12
NP_006769 (OMIM: 605701) tripartite motif-containi ( 481) 534 73.3 1.2e-12
XP_011512568 (OMIM: 609316) PREDICTED: E3 ubiquiti ( 261) 525 72.0 1.6e-12
NP_742013 (OMIM: 605700) E3 ubiquitin-protein liga ( 488) 527 72.5 2.1e-12
XP_016856908 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 262) 518 71.2 2.8e-12
XP_016856907 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 262) 518 71.2 2.8e-12
NP_067076 (OMIM: 605700) E3 ubiquitin-protein liga ( 518) 520 71.8 3.8e-12
XP_011542513 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 450) 509 70.5 8.2e-12
XP_011512527 (OMIM: 605701) PREDICTED: tripartite ( 413) 479 67.1 8e-11
XP_011512524 (OMIM: 605701) PREDICTED: tripartite ( 499) 479 67.1 9.1e-11
XP_011512525 (OMIM: 605701) PREDICTED: tripartite ( 499) 479 67.1 9.1e-11
XP_011512523 (OMIM: 605701) PREDICTED: tripartite ( 499) 479 67.1 9.1e-11
NP_065091 (OMIM: 606124) tripartite motif-containi ( 452) 435 62.1 2.6e-09
NP_001185573 (OMIM: 607564) tripartite motif-conta ( 313) 429 61.3 3.2e-09
NP_001185574 (OMIM: 607564) tripartite motif-conta ( 313) 429 61.3 3.2e-09
XP_005249435 (OMIM: 600830) PREDICTED: tripartite ( 539) 418 60.3 1.1e-08
XP_005249433 (OMIM: 600830) PREDICTED: tripartite ( 539) 418 60.3 1.1e-08
>>NP_149083 (OMIM: 608487) tripartite motif-containing p (347 aa)
initn: 2331 init1: 2331 opt: 2331 Z-score: 1441.1 bits: 275.1 E(85289): 1.6e-73
Smith-Waterman score: 2331; 100.0% identity (100.0% similar) in 347 aa overlap (1-347:1-347)
10 20 30 40 50 60
pF1KE3 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGK
250 260 270 280 290 300
310 320 330 340
pF1KE3 EKSHYHKPPCGLSLLLSLSFRILCSLLGSCFKIYDSPSKTHITYPSL
:::::::::::::::::::::::::::::::::::::::::::::::
NP_149 EKSHYHKPPCGLSLLLSLSFRILCSLLGSCFKIYDSPSKTHITYPSL
310 320 330 340
>>NP_149084 (OMIM: 608487) tripartite motif-containing p (326 aa)
initn: 2000 init1: 2000 opt: 2000 Z-score: 1240.4 bits: 237.9 E(85289): 2.4e-62
Smith-Waterman score: 2000; 100.0% identity (100.0% similar) in 299 aa overlap (1-299:1-299)
10 20 30 40 50 60
pF1KE3 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGW
250 260 270 280 290 300
310 320 330 340
pF1KE3 EKSHYHKPPCGLSLLLSLSFRILCSLLGSCFKIYDSPSKTHITYPSL
NP_149 SAMARSRFTATSTSQIQAILLPQPPK
310 320
>>XP_005253241 (OMIM: 608487) PREDICTED: tripartite moti (326 aa)
initn: 2000 init1: 2000 opt: 2000 Z-score: 1240.4 bits: 237.9 E(85289): 2.4e-62
Smith-Waterman score: 2000; 100.0% identity (100.0% similar) in 299 aa overlap (1-299:1-299)
10 20 30 40 50 60
pF1KE3 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGW
250 260 270 280 290 300
310 320 330 340
pF1KE3 EKSHYHKPPCGLSLLLSLSFRILCSLLGSCFKIYDSPSKTHITYPSL
XP_005 SAMARSRFTATSTSQIQAILLPQPPK
310 320
>>XP_016873951 (OMIM: 608487) PREDICTED: tripartite moti (300 aa)
initn: 1992 init1: 1992 opt: 1992 Z-score: 1236.0 bits: 236.9 E(85289): 4.2e-62
Smith-Waterman score: 1992; 100.0% identity (100.0% similar) in 298 aa overlap (1-298:1-298)
10 20 30 40 50 60
pF1KE3 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWED
250 260 270 280 290 300
310 320 330 340
pF1KE3 EKSHYHKPPCGLSLLLSLSFRILCSLLGSCFKIYDSPSKTHITYPSL
>>NP_149023 (OMIM: 608487) tripartite motif-containing p (493 aa)
initn: 1992 init1: 1992 opt: 1992 Z-score: 1233.3 bits: 237.2 E(85289): 5.9e-62
Smith-Waterman score: 1992; 100.0% identity (100.0% similar) in 298 aa overlap (1-298:1-298)
10 20 30 40 50 60
pF1KE3 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWVD
250 260 270 280 290 300
310 320 330 340
pF1KE3 EKSHYHKPPCGLSLLLSLSFRILCSLLGSCFKIYDSPSKTHITYPSL
NP_149 VTVAPNNISCAVISEDKRQVSSPKPQIIYGARGTRYQTFVNFNYCTGILGSQSITSGKHY
310 320 330 340 350 360
>>XP_005253240 (OMIM: 608487) PREDICTED: tripartite moti (493 aa)
initn: 1992 init1: 1992 opt: 1992 Z-score: 1233.3 bits: 237.2 E(85289): 5.9e-62
Smith-Waterman score: 1992; 100.0% identity (100.0% similar) in 298 aa overlap (1-298:1-298)
10 20 30 40 50 60
pF1KE3 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWVD
250 260 270 280 290 300
310 320 330 340
pF1KE3 EKSHYHKPPCGLSLLLSLSFRILCSLLGSCFKIYDSPSKTHITYPSL
XP_005 VTVAPNNISCAVISEDKRQVSSPKPQIIYGARGTRYQTFVNFNYCTGILGSQSITSGKHY
310 320 330 340 350 360
>>XP_006718421 (OMIM: 608487) PREDICTED: tripartite moti (265 aa)
initn: 1736 init1: 1710 opt: 1710 Z-score: 1065.4 bits: 205.2 E(85289): 1.3e-52
Smith-Waterman score: 1710; 99.2% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KE3 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGK
::::::::::::::::..
XP_006 GSVMELLQGVDGVIKRADRCPTLLG
250 260
>>XP_016873952 (OMIM: 608487) PREDICTED: tripartite moti (265 aa)
initn: 1736 init1: 1710 opt: 1710 Z-score: 1065.4 bits: 205.2 E(85289): 1.3e-52
Smith-Waterman score: 1710; 99.2% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KE3 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGK
::::::::::::::::..
XP_016 GSVMELLQGVDGVIKRADRCPTLLG
250 260
>>XP_016873950 (OMIM: 608487) PREDICTED: tripartite moti (310 aa)
initn: 1736 init1: 1710 opt: 1710 Z-score: 1064.5 bits: 205.3 E(85289): 1.5e-52
Smith-Waterman score: 1710; 99.2% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KE3 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGK
::::::::::::::::..
XP_016 GSVMELLQGVDGVIKRADRCPTLLGLECNGTISVHCNLHLSDSSNSPASASQVAGITGAH
250 260 270 280 290 300
>>XP_011518728 (OMIM: 608487) PREDICTED: tripartite moti (310 aa)
initn: 1736 init1: 1710 opt: 1710 Z-score: 1064.5 bits: 205.3 E(85289): 1.5e-52
Smith-Waterman score: 1710; 99.2% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KE3 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWGK
::::::::::::::::..
XP_011 GSVMELLQGVDGVIKRADRCPTLLGLECNGTISVHCNLHLSDSSNSPASASQVAGITGAH
250 260 270 280 290 300
347 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 08:28:55 2016 done: Sun Nov 6 08:28:57 2016
Total Scan time: 8.870 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]