Result of FASTA (omim) for
pFN21AE3921
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3921, 399 aa
1>>>pF1KE3921 399 - 399 aa - 399 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3897+/-0.000425; mu= 12.7953+/- 0.027
mean_var=122.2048+/-24.651, 0's: 0 Z-trim(114.7): 55 B-trim: 695 in 1/51
Lambda= 0.116019
statistics sampled from 24715 (24757) to 24715 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.29), width: 16
Scan time: 7.640
The best scores are: opt bits E(85289)
NP_071440 (OMIM: 608267) ras-related GTP-binding p ( 399) 2631 451.7 1.4e-126
NP_067067 (OMIM: 608268) ras-related GTP-binding p ( 400) 1957 338.9 1.3e-92
XP_011534324 (OMIM: 608268) PREDICTED: ras-related ( 386) 1953 338.2 2e-92
NP_001258780 (OMIM: 608267) ras-related GTP-bindin ( 365) 1888 327.3 3.6e-89
XP_005248812 (OMIM: 608268) PREDICTED: ras-related ( 303) 1513 264.5 2.5e-70
NP_006055 (OMIM: 300725) ras-related GTP-binding p ( 346) 282 58.5 2.9e-08
XP_016884706 (OMIM: 300725) PREDICTED: ras-related ( 308) 278 57.8 4.2e-08
NP_006561 (OMIM: 612194) ras-related GTP-binding p ( 313) 275 57.3 6e-08
XP_005262030 (OMIM: 300725) PREDICTED: ras-related ( 336) 226 49.1 1.9e-05
NP_057740 (OMIM: 300725) ras-related GTP-binding p ( 374) 226 49.2 2e-05
XP_016884707 (OMIM: 300725) PREDICTED: ras-related ( 286) 224 48.7 2.1e-05
>>NP_071440 (OMIM: 608267) ras-related GTP-binding prote (399 aa)
initn: 2631 init1: 2631 opt: 2631 Z-score: 2393.5 bits: 451.7 E(85289): 1.4e-126
Smith-Waterman score: 2631; 100.0% identity (100.0% similar) in 399 aa overlap (1-399:1-399)
10 20 30 40 50 60
pF1KE3 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR
310 320 330 340 350 360
370 380 390
pF1KE3 KAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI
:::::::::::::::::::::::::::::::::::::::
NP_071 KAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI
370 380 390
>>NP_067067 (OMIM: 608268) ras-related GTP-binding prote (400 aa)
initn: 1980 init1: 1953 opt: 1957 Z-score: 1783.7 bits: 338.9 E(85289): 1.3e-92
Smith-Waterman score: 1966; 79.9% identity (87.1% similar) in 388 aa overlap (23-396:10-397)
10 20 30 40 50
pF1KE3 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEA----AAAGGG---VGAGAGGGCG
:.: . :::::. : : : : .:
NP_067 MSQVLGKPQPQDEDDAEEEEEEDELVGLADYGDGPDSSDADPDSGTE
10 20 30 40
60 70 80 90 100
pF1KE3 PGGADSS-------KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISN
: : : ::::::::::::::::::::::::::::::::::::::: ..:.::
NP_067 EGVLDFSDPFSTEVKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSN
50 60 70 80 90 100
110 120 130 140 150 160
pF1KE3 SSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYK
::::::::::::::.::::::::::::::::::::.:::.::::::::.:::.::..:::
NP_067 SSFVNFQIWDFPGQIDFFDPTFDYEMIFRGTGALIFVIDSQDDYMEALARLHLTVTRAYK
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE3 VNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIF
:: :.:::::::::::::::::::::::::::::::::::::::.:::::::::::::::
NP_067 VNTDINFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYDHSIF
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE3 EAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCC
::::::::::::::::::::::::::::::::::::::::::::::::.:::::.:::::
NP_067 EAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYELCC
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE3 DMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESF
::::::::.::::::::::.:. ::::: ::::::::::::::::::::::::..:::::
NP_067 DMIDVVIDISCIYGLKEDGAGTPYDKESTAIIKLNNTTVLYLKEVTKFLALVCFVREESF
290 300 310 320 330 340
350 360 370 380 390
pF1KE3 ERKGLIDYNFHCFRKAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI
::::::::::::::::::::::: . .: :. .. : : :::::
NP_067 ERKGLIDYNFHCFRKAIHEVFEVRMKVVKSRKVQNRLQKKKRATPNGTPRVLL
350 360 370 380 390 400
>>XP_011534324 (OMIM: 608268) PREDICTED: ras-related GTP (386 aa)
initn: 1953 init1: 1953 opt: 1953 Z-score: 1780.3 bits: 338.2 E(85289): 2e-92
Smith-Waterman score: 1953; 87.8% identity (94.9% similar) in 336 aa overlap (61-396:48-383)
40 50 60 70 80 90
pF1KE3 EEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRSGKSSIQKVVFHKMSPNET
::::::::::::::::::::::::::::::
XP_011 RQLRVSVSPRVAAGGAHPVLDFSDPFSTEVKPRILLMGLRRSGKSSIQKVVFHKMSPNET
20 30 40 50 60 70
100 110 120 130 140 150
pF1KE3 LFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQDDY
::::::::: ..:.::::::::::::::::.::::::::::::::::::::.:::.::::
XP_011 LFLESTNKICREDVSNSSFVNFQIWDFPGQIDFFDPTFDYEMIFRGTGALIFVIDSQDDY
80 90 100 110 120 130
160 170 180 190 200 210
pF1KE3 MEALTRLHITVSKAYKVNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEK
::::.:::.::..::::: :.:::::::::::::::::::::::::::::::::::::::
XP_011 MEALARLHLTVTRAYKVNTDINFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEK
140 150 160 170 180 190
220 230 240 250 260 270
pF1KE3 LHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYI
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYI
200 210 220 230 240 250
280 290 300 310 320 330
pF1KE3 ATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVLYLKE
::::.:::::.:::::::::::::.::::::::::.:. ::::: :::::::::::::::
XP_011 ATDSTPVDMQTYELCCDMIDVVIDISCIYGLKEDGAGTPYDKESTAIIKLNNTTVLYLKE
260 270 280 290 300 310
340 350 360 370 380 390
pF1KE3 VTKFLALVCILREESFERKGLIDYNFHCFRKAIHEVFEVGVTSHRSCGHQTSASSLKALT
:::::::::..:::::::::::::::::::::::::::: . .: :. .. : :
XP_011 VTKFLALVCFVREESFERKGLIDYNFHCFRKAIHEVFEVRMKVVKSRKVQNRLQKKKRAT
320 330 340 350 360 370
pF1KE3 HNGTPRNAI
:::::
XP_011 PNGTPRVLL
380
>>NP_001258780 (OMIM: 608267) ras-related GTP-binding pr (365 aa)
initn: 2148 init1: 1888 opt: 1888 Z-score: 1721.8 bits: 327.3 E(85289): 3.6e-89
Smith-Waterman score: 2335; 91.5% identity (91.5% similar) in 399 aa overlap (1-399:1-365)
10 20 30 40 50 60
pF1KE3 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ
::::::::::::::::::: :::::::
NP_001 KPRILLMGLRRSGKSSIQK----------------------------------IWDFPGQ
70 80
130 140 150 160 170 180
pF1KE3 MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE3 DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE3 PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE3 LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR
270 280 290 300 310 320
370 380 390
pF1KE3 KAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI
:::::::::::::::::::::::::::::::::::::::
NP_001 KAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI
330 340 350 360
>>XP_005248812 (OMIM: 608268) PREDICTED: ras-related GTP (303 aa)
initn: 1536 init1: 1509 opt: 1513 Z-score: 1383.7 bits: 264.5 E(85289): 2.5e-70
Smith-Waterman score: 1522; 81.5% identity (88.0% similar) in 292 aa overlap (23-300:10-301)
10 20 30 40 50
pF1KE3 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEA----AAAGGG---VGAGAGGGCG
:.: . :::::. : : : : .:
XP_005 MSQVLGKPQPQDEDDAEEEEEEDELVGLADYGDGPDSSDADPDSGTE
10 20 30 40
60 70 80 90 100
pF1KE3 PGGADSS-------KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISN
: : : ::::::::::::::::::::::::::::::::::::::: ..:.::
XP_005 EGVLDFSDPFSTEVKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSN
50 60 70 80 90 100
110 120 130 140 150 160
pF1KE3 SSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYK
::::::::::::::.::::::::::::::::::::.:::.::::::::.:::.::..:::
XP_005 SSFVNFQIWDFPGQIDFFDPTFDYEMIFRGTGALIFVIDSQDDYMEALARLHLTVTRAYK
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE3 VNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIF
:: :.:::::::::::::::::::::::::::::::::::::::.:::::::::::::::
XP_005 VNTDINFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYDHSIF
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE3 EAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCC
::::::::::::::::::::::::::::::::::::::::::::::::.:::::.:::::
XP_005 EAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYELCC
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE3 DMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESF
::::::::.:::::
XP_005 DMIDVVIDISCIYGAN
290 300
>>NP_006055 (OMIM: 300725) ras-related GTP-binding prote (346 aa)
initn: 273 init1: 105 opt: 282 Z-score: 269.4 bits: 58.5 E(85289): 2.9e-08
Smith-Waterman score: 282; 28.3% identity (60.9% similar) in 233 aa overlap (43-271:24-248)
20 30 40 50 60 70
pF1KE3 AGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRS
: :. : :. : : ..:::: :
NP_006 MEESDSEKTTEKENLGPRMDPPLGEPEGSLGWVLPNTA--MKKKVLLMGKSGS
10 20 30 40 50
80 90 100 110 120 130
pF1KE3 GKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTF--DY
::.:.....: .. .: : .: . .. . . . ...:: :: :.. : .
NP_006 GKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQR
60 70 80 90 100 110
140 150 160 170 180
pF1KE3 EMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVN-PDMNFEVFIHKVDGLSDDHKI
. :::.. .::::.:... .: . . . .: : :: .. ..::.: ...:
NP_006 DNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQED---
120 130 140 150 160
190 200 210 220 230 240
pF1KE3 ETQRD-IHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLN
::: : .. ..:: . . :. : . :::.:.....:.:..: .:::.. :: :
NP_006 --QRDLIFKEREEDLRRLS-RPLECSCFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLR
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE3 IFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGSGS
: ....::. .. . :.
NP_006 NFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFKLSCSKLAASFQSM
230 240 250 260 270 280
>>XP_016884706 (OMIM: 300725) PREDICTED: ras-related GTP (308 aa)
initn: 273 init1: 105 opt: 278 Z-score: 266.4 bits: 57.8 E(85289): 4.2e-08
Smith-Waterman score: 278; 28.4% identity (62.8% similar) in 215 aa overlap (61-271:2-210)
40 50 60 70 80 90
pF1KE3 EEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRSGKSSIQKVVFHKMSPNET
: ..:::: :::.:.....: .. .:
XP_016 MKKKVLLMGKSGSGKTSMRSIIFANYIARDT
10 20 30
100 110 120 130 140
pF1KE3 LFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTF--DYEMIFRGTGALIYVIDAQD
: .: . .. . . . ...:: :: :.. : . . :::.. .::::.:...
XP_016 RRLGATIDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVES
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE3 DYMEALTRLHITVSKAYKVN-PDMNFEVFIHKVDGLSDDHKIETQRD-IHQRANDDLADA
.: . . . .: : :: .. ..::.: ...: ::: : .. ..::
XP_016 RELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQED-----QRDLIFKEREEDLRRL
100 110 120 130 140
210 220 230 240 250 260
pF1KE3 GLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVS
. . :. : . :::.:.....:.:..: .:::.. :: : : ....::. ..
XP_016 S-RPLECSCFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAEIIEADEVLLFERAT
150 160 170 180 190 200
270 280 290 300 310 320
pF1KE3 KIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVL
. :.
XP_016 FLVISHYQCKEQRDAHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNT
210 220 230 240 250 260
>>NP_006561 (OMIM: 612194) ras-related GTP-binding prote (313 aa)
initn: 270 init1: 102 opt: 275 Z-score: 263.6 bits: 57.3 E(85289): 6e-08
Smith-Waterman score: 275; 27.9% identity (63.3% similar) in 215 aa overlap (61-271:7-215)
40 50 60 70 80 90
pF1KE3 EEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRSGKSSIQKVVFHKMSPNET
: ..:::: :::.:.....: .. .:
NP_006 MPNTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDT
10 20 30
100 110 120 130 140
pF1KE3 LFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTF--DYEMIFRGTGALIYVIDAQD
: .: . .. . . . ...:: :: :.. : . . :::.. .::::.:...
NP_006 RRLGATIDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVES
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE3 DYMEALTRLHITVSKAYKVN-PDMNFEVFIHKVDGLSDDHKIETQRD-IHQRANDDLADA
.: . . . .: : :: .. ..::.: ...: ::: : .. ..::
NP_006 RELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQED-----QRDLIFKEREEDLRRL
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE3 GLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVS
. . :. . . :::.:.....:.:..: .:::.. :: : : . ....::. ..
NP_006 S-RPLECACFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAQIIEADEVLLFERAT
160 170 180 190 200 210
270 280 290 300 310 320
pF1KE3 KIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVL
. :.
NP_006 FLVISHYQCKEQRDVHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNT
220 230 240 250 260 270
>>XP_005262030 (OMIM: 300725) PREDICTED: ras-related GTP (336 aa)
initn: 258 init1: 105 opt: 226 Z-score: 218.9 bits: 49.1 E(85289): 1.9e-05
Smith-Waterman score: 243; 27.6% identity (58.4% similar) in 243 aa overlap (61-271:2-238)
40 50 60 70 80 90
pF1KE3 EEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRSGKSSIQKVVFHKMSPNET
: ..:::: :::.:.....: .. .:
XP_005 MKKKVLLMGKSGSGKTSMRSIIFANYIARDT
10 20 30
100 110 120
pF1KE3 LFLEST--NKIYK-------------DDISNS-------SFVNF------QIWDFPGQMD
: .: ..:.. :...:. : : : ..:: ::
XP_005 RRLGATILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHSHVRFLGNLVLNLWDCGGQDT
40 50 60 70 80 90
130 140 150 160 170
pF1KE3 FFDPTF--DYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVN-PDMNFEVFIHK
:.. : . . :::.. .::::.:... .: . . . .: : :: .. ..::
XP_005 FMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHK
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE3 VDGLSDDHKIETQRD-IHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIP
.: ...: ::: : .. ..:: . . :. : . :::.:.....:.:..: .:::
XP_005 MDLVQED-----QRDLIFKEREEDLRRLS-RPLECSCFRTSIWDETLYKAWSSIVYQLIP
160 170 180 190 200
240 250 260 270 280 290
pF1KE3 QLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCI
.. :: : : ....::. .. . :.
XP_005 NVQQLEMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFKLSC
210 220 230 240 250 260
300 310 320 330 340 350
pF1KE3 YGLKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHC
XP_005 SKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEKLER
270 280 290 300 310 320
>>NP_057740 (OMIM: 300725) ras-related GTP-binding prote (374 aa)
initn: 258 init1: 105 opt: 226 Z-score: 218.3 bits: 49.2 E(85289): 2e-05
Smith-Waterman score: 247; 27.6% identity (57.1% similar) in 261 aa overlap (43-271:24-276)
20 30 40 50 60 70
pF1KE3 AGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRS
: :. : :. : : ..:::: :
NP_057 MEESDSEKTTEKENLGPRMDPPLGEPEGSLGWVLPNTA--MKKKVLLMGKSGS
10 20 30 40 50
80 90 100 110
pF1KE3 GKSSIQKVVFHKMSPNETLFLEST--NKIYK-------------DDISNS-------SFV
::.:.....: .. .: : .: ..:.. :...:. : :
NP_057 GKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHSHV
60 70 80 90 100 110
120 130 140 150 160
pF1KE3 NF------QIWDFPGQMDFFDPTF--DYEMIFRGTGALIYVIDAQDDYMEALTRLHITVS
: ..:: :: :.. : . . :::.. .::::.:... .: . . .
NP_057 RFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE3 KAYKVN-PDMNFEVFIHKVDGLSDDHKIETQRD-IHQRANDDLADAGLEKLHLSFYLTSI
.: : :: .. ..::.: ...: ::: : .. ..:: . . :. : . :::
NP_057 EAILQNSPDAKIFCLVHKMDLVQED-----QRDLIFKEREEDLRRLS-RPLECSCFRTSI
180 190 200 210 220
230 240 250 260 270 280
pF1KE3 YDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQ
.:.....:.:..: .:::.. :: : : ....::. .. . :.
NP_057 WDETLYKAWSSIVYQLIPNVQQLEMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRD
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE3 SYELCCDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCI
NP_057 AHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSA
290 300 310 320 330 340
399 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 08:56:25 2016 done: Sun Nov 6 08:56:26 2016
Total Scan time: 7.640 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]