Result of FASTA (omim) for
pFN21AE3902
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3902, 181 aa
1>>>pF1KE3902 181 - 181 aa - 181 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9896+/-0.00044; mu= 14.8497+/- 0.028
mean_var=72.9393+/-15.010, 0's: 0 Z-trim(110.9): 287 B-trim: 645 in 2/50
Lambda= 0.150174
statistics sampled from 19016 (19369) to 19016 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.601), E-opt: 0.2 (0.227), width: 16
Scan time: 5.160
The best scores are: opt bits E(85289)
NP_001168 (OMIM: 603425) ADP-ribosylation factor-l ( 181) 1169 262.4 2.9e-70
NP_001287997 (OMIM: 603425) ADP-ribosylation facto ( 135) 870 197.5 7.2e-51
NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 ( 181) 723 165.8 3.5e-41
NP_001019397 (OMIM: 103180) ADP-ribosylation facto ( 181) 723 165.8 3.5e-41
NP_001019398 (OMIM: 103180) ADP-ribosylation facto ( 181) 723 165.8 3.5e-41
NP_001019399 (OMIM: 103180) ADP-ribosylation facto ( 181) 723 165.8 3.5e-41
XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 181) 719 164.9 6.4e-41
NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 ( 181) 719 164.9 6.4e-41
NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 ( 180) 711 163.2 2.1e-40
NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 ( 180) 699 160.6 1.3e-39
NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 ( 175) 668 153.8 1.3e-37
NP_036229 (OMIM: 608960) ADP-ribosylation factor-l ( 179) 582 135.2 5.4e-32
NP_848930 (OMIM: 608909) ADP-ribosylation factor-l ( 179) 577 134.1 1.2e-31
XP_006719454 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 137) 572 133.0 2e-31
XP_016856722 (OMIM: 103180) PREDICTED: ADP-ribosyl ( 212) 573 133.3 2.4e-31
XP_005248554 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 398) 561 131.0 2.3e-30
NP_001647 (OMIM: 601747) E3 ubiquitin-protein liga ( 574) 561 131.1 3e-30
XP_016871749 (OMIM: 604695) PREDICTED: ADP-ribosyl ( 182) 524 122.7 3.3e-28
NP_004302 (OMIM: 604695) ADP-ribosylation factor-l ( 182) 524 122.7 3.3e-28
XP_016864933 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 569) 514 120.9 3.5e-27
NP_150230 (OMIM: 601747) E3 ubiquitin-protein liga ( 569) 514 120.9 3.5e-27
NP_150231 (OMIM: 601747) E3 ubiquitin-protein liga ( 546) 504 118.7 1.5e-26
NP_001658 (OMIM: 601175) ADP-ribosylation factor-l ( 184) 498 117.0 1.7e-26
NP_001032251 (OMIM: 608960) ADP-ribosylation facto ( 142) 466 110.0 1.7e-24
NP_817114 (OMIM: 608960) ADP-ribosylation factor-l ( 142) 466 110.0 1.7e-24
XP_005252458 (OMIM: 608909) PREDICTED: ADP-ribosyl ( 142) 462 109.1 3.1e-24
NP_079323 (OMIM: 614439) ADP-ribosylation factor-l ( 192) 456 107.9 9.5e-24
NP_005729 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 427 101.7 7.6e-22
NP_001182325 (OMIM: 604786) ADP-ribosylation facto ( 200) 427 101.7 7.6e-22
NP_997625 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 427 101.7 7.6e-22
NP_001032241 (OMIM: 604786) ADP-ribosylation facto ( 200) 427 101.7 7.6e-22
NP_005728 (OMIM: 604787) ADP-ribosylation factor-l ( 192) 424 101.0 1.2e-21
NP_001269360 (OMIM: 604787) ADP-ribosylation facto ( 201) 424 101.0 1.2e-21
NP_001310442 (OMIM: 209900,268000,600151,608845,61 ( 193) 417 99.5 3.3e-21
NP_816931 (OMIM: 209900,268000,600151,608845,61357 ( 186) 416 99.3 3.8e-21
NP_115522 (OMIM: 209900,268000,600151,608845,61357 ( 186) 416 99.3 3.8e-21
NP_001265222 (OMIM: 209900,268000,600151,608845,61 ( 186) 416 99.3 3.8e-21
XP_016862800 (OMIM: 209900,268000,600151,608845,61 ( 186) 416 99.3 3.8e-21
XP_005266310 (OMIM: 609351) PREDICTED: ADP-ribosyl ( 196) 412 98.4 7.1e-21
NP_612459 (OMIM: 609351) ADP-ribosylation factor-l ( 196) 412 98.4 7.1e-21
NP_060654 (OMIM: 616596) ADP-ribosylation factor-l ( 186) 399 95.6 4.8e-20
NP_620150 (OMIM: 616597) ADP-ribosylation factor-l ( 186) 389 93.4 2.2e-19
XP_011523084 (OMIM: 600732) PREDICTED: ADP-ribosyl ( 201) 376 90.6 1.6e-18
NP_001652 (OMIM: 600732) ADP-ribosylation factor-l ( 201) 376 90.6 1.6e-18
NP_001310443 (OMIM: 209900,268000,600151,608845,61 ( 159) 354 85.8 3.7e-17
XP_016862801 (OMIM: 209900,268000,600151,608845,61 ( 159) 354 85.8 3.7e-17
NP_001186674 (OMIM: 601175) ADP-ribosylation facto ( 157) 353 85.6 4.2e-17
XP_011526785 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 324 79.4 4e-15
NP_001254476 (OMIM: 604699) ADP-ribosylation facto ( 201) 324 79.4 4e-15
NP_003215 (OMIM: 604699) ADP-ribosylation factor-r ( 201) 324 79.4 4e-15
>>NP_001168 (OMIM: 603425) ADP-ribosylation factor-like (181 aa)
initn: 1169 init1: 1169 opt: 1169 Z-score: 1382.6 bits: 262.4 E(85289): 2.9e-70
Smith-Waterman score: 1169; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR
130 140 150 160 170 180
pF1KE3 Q
:
NP_001 Q
>>NP_001287997 (OMIM: 603425) ADP-ribosylation factor-li (135 aa)
initn: 870 init1: 870 opt: 870 Z-score: 1034.2 bits: 197.5 E(85289): 7.2e-51
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 133 aa overlap (49-181:3-135)
20 30 40 50 60 70
pF1KE3 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYW
::::::::::::::::::::::::::::::
NP_001 MAIGFNVETVTYKNLKFQVWDLGGQTSIRPYW
10 20 30
80 90 100 110 120 130
pF1KE3 RCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSE
40 50 60 70 80 90
140 150 160 170 180
pF1KE3 MANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSRQ
:::::::::::::::::::::::::::::::::::::::::::
NP_001 MANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSRQ
100 110 120 130
>>NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 [Ho (181 aa)
initn: 738 init1: 723 opt: 723 Z-score: 860.4 bits: 165.8 E(85289): 3.5e-41
Smith-Waterman score: 723; 56.9% identity (87.3% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN
::..:...:..::: .:::::..:::.::::::::.:..::.:::::::::::::: :::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI
..: :::.::: .::: :: :..::...:.:::: ::.:.. .. ::. :: :.::: :.
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR
:.:::::::. .::...:....::: .:. :.: : : ::.: :: :...:: . :...
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
pF1KE3 Q
.
NP_001 K
>>NP_001019397 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 738 init1: 723 opt: 723 Z-score: 860.4 bits: 165.8 E(85289): 3.5e-41
Smith-Waterman score: 723; 56.9% identity (87.3% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN
::..:...:..::: .:::::..:::.::::::::.:..::.:::::::::::::: :::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI
..: :::.::: .::: :: :..::...:.:::: ::.:.. .. ::. :: :.::: :.
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR
:.:::::::. .::...:....::: .:. :.: : : ::.: :: :...:: . :...
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
pF1KE3 Q
.
NP_001 K
>>NP_001019398 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 738 init1: 723 opt: 723 Z-score: 860.4 bits: 165.8 E(85289): 3.5e-41
Smith-Waterman score: 723; 56.9% identity (87.3% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN
::..:...:..::: .:::::..:::.::::::::.:..::.:::::::::::::: :::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI
..: :::.::: .::: :: :..::...:.:::: ::.:.. .. ::. :: :.::: :.
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR
:.:::::::. .::...:....::: .:. :.: : : ::.: :: :...:: . :...
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
pF1KE3 Q
.
NP_001 K
>>NP_001019399 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 738 init1: 723 opt: 723 Z-score: 860.4 bits: 165.8 E(85289): 3.5e-41
Smith-Waterman score: 723; 56.9% identity (87.3% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN
::..:...:..::: .:::::..:::.::::::::.:..::.:::::::::::::: :::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI
..: :::.::: .::: :: :..::...:.:::: ::.:.. .. ::. :: :.::: :.
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR
:.:::::::. .::...:....::: .:. :.: : : ::.: :: :...:: . :...
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
pF1KE3 Q
.
NP_001 K
>>XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosylatio (181 aa)
initn: 719 init1: 719 opt: 719 Z-score: 855.7 bits: 164.9 E(85289): 6.4e-41
Smith-Waterman score: 719; 56.9% identity (87.8% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN
::..:.....::.: .:::::..:::.::::::::.:..::.:::::::::::::: :::
XP_005 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI
..: :::.::: .::: :: :..::...:.:::: ::.:.. .. ::. :: :.::: :.
XP_005 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR
:.:::::::. .::...:....::: .:. :.: : : ::.: :: :...::.. ::..
XP_005 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
130 140 150 160 170 180
pF1KE3 Q
.
XP_005 K
>>NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 [Ho (181 aa)
initn: 719 init1: 719 opt: 719 Z-score: 855.7 bits: 164.9 E(85289): 6.4e-41
Smith-Waterman score: 719; 56.9% identity (87.8% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN
::..:.....::.: .:::::..:::.::::::::.:..::.:::::::::::::: :::
NP_001 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI
..: :::.::: .::: :: :..::...:.:::: ::.:.. .. ::. :: :.::: :.
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR
:.:::::::. .::...:....::: .:. :.: : : ::.: :: :...::.. ::..
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
130 140 150 160 170 180
pF1KE3 Q
.
NP_001 K
>>NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 [Ho (180 aa)
initn: 727 init1: 711 opt: 711 Z-score: 846.3 bits: 163.2 E(85289): 2.1e-40
Smith-Waterman score: 711; 58.3% identity (82.8% similar) in 180 aa overlap (1-180:1-180)
10 20 30 40 50 60
pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN
:: :..:: .:: ..::::..:::.::::::::.:..::.:::::::::::::: :::
NP_001 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI
. : :::.::: .::: :: :..::...:.:::: ::.:. : .:: ::.:.::: :.
NP_001 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR
:.:::::::: .:: ::....::: :..: : . : ::.:::: ....:: . :..:
NP_001 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
130 140 150 160 170 180
pF1KE3 Q
>>NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 [Ho (180 aa)
initn: 699 init1: 699 opt: 699 Z-score: 832.3 bits: 160.6 E(85289): 1.3e-39
Smith-Waterman score: 699; 58.3% identity (82.2% similar) in 180 aa overlap (1-180:1-180)
10 20 30 40 50 60
pF1KE3 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN
:: .::.:: ::: ..::::..:::.::::::::.:..::.:::::::::::::: :::
NP_001 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI
. : :::.::: ::: :. :..::...:.:::: ::.:: .:: :: .::: :.
NP_001 ICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR
:..::::::. .::. :::...::: .:..: : . : ::.:::: :...:: . :..:
NP_001 LLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR
130 140 150 160 170 180
pF1KE3 Q
181 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 09:06:43 2016 done: Sun Nov 6 09:06:44 2016
Total Scan time: 5.160 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]