Result of FASTA (ccds) for
pFN21AE3884
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3884, 331 aa
1>>>pF1KE3884 331 - 331 aa - 331 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2997+/-0.000983; mu= 15.4879+/- 0.059
mean_var=60.4009+/-12.002, 0's: 0 Z-trim(103.4): 55 B-trim: 429 in 1/47
Lambda= 0.165026
statistics sampled from 7438 (7494) to 7438 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.603), E-opt: 0.2 (0.224), width: 16
Scan time: 1.160
The best scores are: opt bits E(33420)
CCDS2933.1 ST3GAL6 gene_id:10402|Hs109|chr3 ( 331) 2256 545.8 1.8e-155
CCDS74968.1 ST3GAL6 gene_id:10402|Hs109|chr3 ( 384) 2256 545.9 2e-155
CCDS59452.1 ST3GAL6 gene_id:10402|Hs109|chr3 ( 213) 1278 312.9 1.5e-85
CCDS8474.1 ST3GAL4 gene_id:6484|Hs109|chr11 ( 329) 706 176.8 2.2e-44
CCDS58194.1 ST3GAL4 gene_id:6484|Hs109|chr11 ( 332) 700 175.4 5.9e-44
CCDS58193.1 ST3GAL4 gene_id:6484|Hs109|chr11 ( 333) 700 175.4 5.9e-44
CCDS497.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 359) 667 167.5 1.5e-41
CCDS492.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 375) 667 167.5 1.5e-41
CCDS494.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 390) 667 167.6 1.6e-41
CCDS498.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 413) 667 167.6 1.7e-41
CCDS496.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 429) 667 167.6 1.7e-41
CCDS493.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 444) 667 167.6 1.8e-41
CCDS57989.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 344) 655 164.7 1e-40
CCDS85962.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 434) 619 156.1 4.8e-38
CCDS85965.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 449) 619 156.2 4.9e-38
CCDS86856.1 ST3GAL5 gene_id:8869|Hs109|chr2 ( 390) 585 148.0 1.2e-35
CCDS42705.1 ST3GAL5 gene_id:8869|Hs109|chr2 ( 395) 585 148.0 1.2e-35
CCDS1986.2 ST3GAL5 gene_id:8869|Hs109|chr2 ( 418) 585 148.0 1.3e-35
CCDS57990.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 261) 389 101.3 9.3e-22
CCDS495.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 277) 389 101.3 9.8e-22
CCDS85961.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 331) 389 101.3 1.1e-21
CCDS57988.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 345) 388 101.1 1.4e-21
CCDS85964.1 ST3GAL3 gene_id:6487|Hs109|chr1 ( 230) 371 97.0 1.6e-20
CCDS86857.1 ST3GAL5 gene_id:8869|Hs109|chr2 ( 365) 316 84.0 2.1e-16
CCDS2073.1 ST6GAL2 gene_id:84620|Hs109|chr2 ( 529) 290 77.9 2.1e-14
CCDS6373.1 ST3GAL1 gene_id:6482|Hs109|chr8 ( 340) 261 70.9 1.7e-12
CCDS77183.1 ST8SIA5 gene_id:29906|Hs109|chr18 ( 345) 254 69.2 5.6e-12
CCDS10890.1 ST3GAL2 gene_id:6483|Hs109|chr16 ( 350) 245 67.1 2.5e-11
>>CCDS2933.1 ST3GAL6 gene_id:10402|Hs109|chr3 (331 aa)
initn: 2256 init1: 2256 opt: 2256 Z-score: 2905.0 bits: 545.8 E(33420): 1.8e-155
Smith-Waterman score: 2256; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KE3 MRGYLVAIFLSAVFLYYVLHCILWGTNVYWVAPVEMKRRNKIQPCLSKPAFASLLRFHQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 MRGYLVAIFLSAVFLYYVLHCILWGTNVYWVAPVEMKRRNKIQPCLSKPAFASLLRFHQF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HPFLCAADFRKIASLYGSDKFDLPYGMRTSAEYFRLALSKLQSCDLFDEFDNIPCKKCVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 HPFLCAADFRKIASLYGSDKFDLPYGMRTSAEYFRLALSKLQSCDLFDEFDNIPCKKCVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 VGNGGVLKNKTLGEKIDSYDVIIRMNNGPVLGHEEEVGRRTTFRLFYPESVFSDPIHNDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 VGNGGVLKNKTLGEKIDSYDVIIRMNNGPVLGHEEEVGRRTTFRLFYPESVFSDPIHNDP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 NTTVILTAFKPHDLRWLLELLMGDKINTNGFWKKPALNLIYKPYQIRILDPFIIRTAAYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 NTTVILTAFKPHDLRWLLELLMGDKINTNGFWKKPALNLIYKPYQIRILDPFIIRTAAYE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 LLHFPKVFPKNQKPKHPTTGIIAITLAFYICHEVHLAGFKYNFSDLKSPLHYYGNATMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 LLHFPKVFPKNQKPKHPTTGIIAITLAFYICHEVHLAGFKYNFSDLKSPLHYYGNATMSL
250 260 270 280 290 300
310 320 330
pF1KE3 MNKNAYHNVTAEQLFLKDIIEKNLVINLTQD
:::::::::::::::::::::::::::::::
CCDS29 MNKNAYHNVTAEQLFLKDIIEKNLVINLTQD
310 320 330
>>CCDS74968.1 ST3GAL6 gene_id:10402|Hs109|chr3 (384 aa)
initn: 2256 init1: 2256 opt: 2256 Z-score: 2904.0 bits: 545.9 E(33420): 2e-155
Smith-Waterman score: 2256; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:54-384)
10 20 30
pF1KE3 MRGYLVAIFLSAVFLYYVLHCILWGTNVYW
::::::::::::::::::::::::::::::
CCDS74 APLRSSLLGLGGSLLPAGFAAGLHCPGEPAMRGYLVAIFLSAVFLYYVLHCILWGTNVYW
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE3 VAPVEMKRRNKIQPCLSKPAFASLLRFHQFHPFLCAADFRKIASLYGSDKFDLPYGMRTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VAPVEMKRRNKIQPCLSKPAFASLLRFHQFHPFLCAADFRKIASLYGSDKFDLPYGMRTS
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE3 AEYFRLALSKLQSCDLFDEFDNIPCKKCVVVGNGGVLKNKTLGEKIDSYDVIIRMNNGPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 AEYFRLALSKLQSCDLFDEFDNIPCKKCVVVGNGGVLKNKTLGEKIDSYDVIIRMNNGPV
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE3 LGHEEEVGRRTTFRLFYPESVFSDPIHNDPNTTVILTAFKPHDLRWLLELLMGDKINTNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LGHEEEVGRRTTFRLFYPESVFSDPIHNDPNTTVILTAFKPHDLRWLLELLMGDKINTNG
210 220 230 240 250 260
220 230 240 250 260 270
pF1KE3 FWKKPALNLIYKPYQIRILDPFIIRTAAYELLHFPKVFPKNQKPKHPTTGIIAITLAFYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 FWKKPALNLIYKPYQIRILDPFIIRTAAYELLHFPKVFPKNQKPKHPTTGIIAITLAFYI
270 280 290 300 310 320
280 290 300 310 320 330
pF1KE3 CHEVHLAGFKYNFSDLKSPLHYYGNATMSLMNKNAYHNVTAEQLFLKDIIEKNLVINLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 CHEVHLAGFKYNFSDLKSPLHYYGNATMSLMNKNAYHNVTAEQLFLKDIIEKNLVINLTQ
330 340 350 360 370 380
pF1KE3 D
:
CCDS74 D
>>CCDS59452.1 ST3GAL6 gene_id:10402|Hs109|chr3 (213 aa)
initn: 1268 init1: 1268 opt: 1278 Z-score: 1649.6 bits: 312.9 E(33420): 1.5e-85
Smith-Waterman score: 1359; 86.5% identity (86.9% similar) in 245 aa overlap (87-331:1-213)
60 70 80 90 100 110
pF1KE3 FHQFHPFLCAADFRKIASLYGSDKFDLPYGMRTSAEYFRLALSKLQSCDLFDEFDNIPCK
:::::::::::::::::::::::::
CCDS59 MRTSAEYFRLALSKLQSCDLFDEFD-----
10 20
120 130 140 150 160 170
pF1KE3 KCVVVGNGGVLKNKTLGEKIDSYDVIIRMNNGPVLGHEEEVGRRTTFRLFYPESVFSDPI
.::::::::::::::::::::::::::::::::
CCDS59 ---------------------------KMNNGPVLGHEEEVGRRTTFRLFYPESVFSDPI
30 40 50
180 190 200 210 220 230
pF1KE3 HNDPNTTVILTAFKPHDLRWLLELLMGDKINTNGFWKKPALNLIYKPYQIRILDPFIIRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 HNDPNTTVILTAFKPHDLRWLLELLMGDKINTNGFWKKPALNLIYKPYQIRILDPFIIRT
60 70 80 90 100 110
240 250 260 270 280 290
pF1KE3 AAYELLHFPKVFPKNQKPKHPTTGIIAITLAFYICHEVHLAGFKYNFSDLKSPLHYYGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 AAYELLHFPKVFPKNQKPKHPTTGIIAITLAFYICHEVHLAGFKYNFSDLKSPLHYYGNA
120 130 140 150 160 170
300 310 320 330
pF1KE3 TMSLMNKNAYHNVTAEQLFLKDIIEKNLVINLTQD
:::::::::::::::::::::::::::::::::::
CCDS59 TMSLMNKNAYHNVTAEQLFLKDIIEKNLVINLTQD
180 190 200 210
>>CCDS8474.1 ST3GAL4 gene_id:6484|Hs109|chr11 (329 aa)
initn: 364 init1: 364 opt: 706 Z-score: 910.6 bits: 176.8 E(33420): 2.2e-44
Smith-Waterman score: 706; 39.1% identity (66.6% similar) in 335 aa overlap (2-329:6-327)
10 20 30 40 50
pF1KE3 MRGYLVAIFLSAVFLYYVLHCILWGTNVYWVAPVEMKRRNKIQPCLSKPAF--ASL
: :.:. :. :.. .: . : . :. :. :. .:::. : ::
CCDS84 MVSKSRWKLLAM-LALVLVVMVWYSISREDSFYF--PIPEKK----EPCLQGEAESKASK
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 L--RFHQFHP-FLCAADFRKIASLYGSDKFDLPYGMRTSAEYFRLALSKLQSCDLFDEFD
: . . .: :: :. . . . ..:::: . : : . : . . : .. ...
CCDS84 LFGNYSRDQPIFLRLEDYFWVKT---PSAYELPYGTKGS-EDLLLRVLAITSSSIPKNIQ
60 70 80 90 100
120 130 140 150 160 170
pF1KE3 NIPCKKCVVVGNGGVLKNKTLGEKIDSYDVIIRMNNGPVLGHEEEVGRRTTFRLFYPESV
.. :..::::::: :.:..::. :..:::.::.::.:: :.: .:: .::.:::::::.
CCDS84 SLRCRRCVVVGNGHRLRNSSLGDAINKYDVVIRLNNAPVAGYEGDVGSKTTMRLFYPESA
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE3 FSDP-IHNDPNTTVILTAFKPHDLRWLLELLMGDKINTNGFWKKPALNLIYKPYQIRILD
:: ..:.:.: ..:.::: :..:. .: : .::::.: : .: :::::.
CCDS84 HFDPKVENNPDTLLVLVAFKAMDFHWIETILSDKKRVRKGFWKQPPLIWDVNPKQIRILN
170 180 190 200 210 220
240 250 260 270 280
pF1KE3 PFIIRTAAYELLHFPKVFPKNQKPKHPTTGIIAITLAFYICHEVHLAGFKY-NFSDLKSP
::... :: .:: .: :.. : : ::::..:::::...: ::.::: : . . :.
CCDS84 PFFMEIAADKLLSLPMQQPRKIKQK-PTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQT
230 240 250 260 270 280
290 300 310 320 330
pF1KE3 LHYYGNATMSLMNKNAYHNVTAEQLFLKDIIEKNLVINLTQD
.::: . :.. : .. :::. : : .: ..: . . :::
CCDS84 IHYYEQITLKSMAGSG-HNVSQEALAIKRMLEMGAIKNLTSF
290 300 310 320
>>CCDS58194.1 ST3GAL4 gene_id:6484|Hs109|chr11 (332 aa)
initn: 364 init1: 364 opt: 700 Z-score: 902.8 bits: 175.4 E(33420): 5.9e-44
Smith-Waterman score: 700; 40.9% identity (68.6% similar) in 296 aa overlap (41-329:41-330)
20 30 40 50 60
pF1KE3 SAVFLYYVLHCILWGTNVYWVAPVEMKRRNKIQPCLSKPAF--ASLL--RFHQFHP-FLC
: .:::. : :: : . . .: ::
CCDS58 MLALVLVVMVWYSISREDRYIELFYFPIPEKKEPCLQGEAESKASKLFGNYSRDQPIFLR
20 30 40 50 60 70
70 80 90 100 110 120
pF1KE3 AADFRKIASLYGSDKFDLPYGMRTSAEYFRLALSKLQSCDLFDEFDNIPCKKCVVVGNGG
:. . . . ..:::: . : . . : . . : .. ..... :..:::::::
CCDS58 LEDYFWVKT---PSAYELPYGTKGSEDLL-LRVLAITSSSIPKNIQSLRCRRCVVVGNGH
80 90 100 110 120
130 140 150 160 170 180
pF1KE3 VLKNKTLGEKIDSYDVIIRMNNGPVLGHEEEVGRRTTFRLFYPESVFSDP-IHNDPNTTV
:.:..::. :..:::.::.::.:: :.: .:: .::.:::::::. :: ..:.:.: .
CCDS58 RLRNSSLGDAINKYDVVIRLNNAPVAGYEGDVGSKTTMRLFYPESAHFDPKVENNPDTLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ILTAFKPHDLRWLLELLMGDKINTNGFWKKPALNLIYKPYQIRILDPFIIRTAAYELLHF
.:.::: :..:. .: : .::::.: : .: :::::.::... :: .:: .
CCDS58 VLVAFKAMDFHWIETILSDKKRVRKGFWKQPPLIWDVNPKQIRILNPFFMEIAADKLLSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PKVFPKNQKPKHPTTGIIAITLAFYICHEVHLAGFKY-NFSDLKSPLHYYGNATMSLMNK
: :.. : : ::::..:::::...: ::.::: : . . :. .::: . :.. :
CCDS58 PMQQPRKIKQK-PTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYYEQITLKSMAG
250 260 270 280 290 300
310 320 330
pF1KE3 NAYHNVTAEQLFLKDIIEKNLVINLTQD
.. :::. : : .: ..: . . :::
CCDS58 SG-HNVSQEALAIKRMLEMGAIKNLTSF
310 320 330
>>CCDS58193.1 ST3GAL4 gene_id:6484|Hs109|chr11 (333 aa)
initn: 364 init1: 364 opt: 700 Z-score: 902.8 bits: 175.4 E(33420): 5.9e-44
Smith-Waterman score: 700; 40.9% identity (68.6% similar) in 296 aa overlap (41-329:42-331)
20 30 40 50 60
pF1KE3 SAVFLYYVLHCILWGTNVYWVAPVEMKRRNKIQPCLSKPAF--ASLL--RFHQFHP-FLC
: .:::. : :: : . . .: ::
CCDS58 MLALVLVVMVWYSISREDRYIELFYFPIPEKKEPCLQGEAESKASKLFGNYSRDQPIFLR
20 30 40 50 60 70
70 80 90 100 110 120
pF1KE3 AADFRKIASLYGSDKFDLPYGMRTSAEYFRLALSKLQSCDLFDEFDNIPCKKCVVVGNGG
:. . . . ..:::: . : . . : . . : .. ..... :..:::::::
CCDS58 LEDYFWVKT---PSAYELPYGTKGSEDLL-LRVLAITSSSIPKNIQSLRCRRCVVVGNGH
80 90 100 110 120
130 140 150 160 170 180
pF1KE3 VLKNKTLGEKIDSYDVIIRMNNGPVLGHEEEVGRRTTFRLFYPESVFSDP-IHNDPNTTV
:.:..::. :..:::.::.::.:: :.: .:: .::.:::::::. :: ..:.:.: .
CCDS58 RLRNSSLGDAINKYDVVIRLNNAPVAGYEGDVGSKTTMRLFYPESAHFDPKVENNPDTLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ILTAFKPHDLRWLLELLMGDKINTNGFWKKPALNLIYKPYQIRILDPFIIRTAAYELLHF
.:.::: :..:. .: : .::::.: : .: :::::.::... :: .:: .
CCDS58 VLVAFKAMDFHWIETILSDKKRVRKGFWKQPPLIWDVNPKQIRILNPFFMEIAADKLLSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PKVFPKNQKPKHPTTGIIAITLAFYICHEVHLAGFKY-NFSDLKSPLHYYGNATMSLMNK
: :.. : : ::::..:::::...: ::.::: : . . :. .::: . :.. :
CCDS58 PMQQPRKIKQK-PTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYYEQITLKSMAG
250 260 270 280 290 300
310 320 330
pF1KE3 NAYHNVTAEQLFLKDIIEKNLVINLTQD
.. :::. : : .: ..: . . :::
CCDS58 SG-HNVSQEALAIKRMLEMGAIKNLTSF
310 320 330
>>CCDS497.1 ST3GAL3 gene_id:6487|Hs109|chr1 (359 aa)
initn: 671 init1: 332 opt: 667 Z-score: 859.8 bits: 167.5 E(33420): 1.5e-41
Smith-Waterman score: 678; 32.6% identity (64.3% similar) in 353 aa overlap (1-329:7-356)
10 20 30
pF1KE3 MRGYLVAI--FLSAVFLYYV---LHCILW---------G--TNVYWVAPVEMKR
.:. :.:. :: :::: :: . : : :. :.:.
CCDS49 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSKYDRLGFLLNLDSKLPAELAT
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE3 R-NKIQPCLSKPAFASLL------RFHQFHPFLCAADFRKIASLYGSDKFDLPYGMRTSA
. ... ::..:: : :: . :.. .::: : . .: :.:.. .
CCDS49 KYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIR---EFVPPFGIKGQD
70 80 90 100 110
100 110 120 130 140 150
pF1KE3 EYFRLALSKLQSCDLFDEFDNIPCKKCVVVGNGGVLKNKTLGEKIDSYDVIIRMNNGPVL
. .. :: . : .:.. :..:..::::::: ::.:: .::.::...:.:..::
CCDS49 NLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVK
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE3 GHEEEVGRRTTFRLFYPESVFSDPIHNDPNTTVILTAFKPHDLRWLLELLMGDKIN-TNG
: :..:: .::.:. :::.... : . . .. .:..:: .:..:: ... .... ..:
CCDS49 GFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKERVSASDG
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE3 FWKKPALNLIYKPYQIRILDPFIIRTAAYELLHFPKVFPKNQKPKHPTTGIIAITLAFYI
:::. : . .: .::::.:..:. ::. :. .: . . :: : .:.:.:..
CCDS49 FWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVAVTMALHG
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE3 CHEVHLAGFKYNFSDLKSPLHYYGNATMSLMNKNAYHNVTAEQLFLKDIIEKNLVINLTQ
: :: .::: :..: ..::::: .. :. .... ::. :. ::. ... .. .:.
CCDS49 CDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKARVITDLSS
300 310 320 330 340 350
pF1KE3 D
CCDS49 GI
>>CCDS492.1 ST3GAL3 gene_id:6487|Hs109|chr1 (375 aa)
initn: 671 init1: 332 opt: 667 Z-score: 859.5 bits: 167.5 E(33420): 1.5e-41
Smith-Waterman score: 667; 34.3% identity (68.9% similar) in 289 aa overlap (48-329:87-372)
20 30 40 50 60 70
pF1KE3 VLHCILWGTNVYWVAPVEMKRRNKIQPCLSKPAFASLL------RFHQFHPFLCAADFRK
::..:: : :: . :.. .:::
CCDS49 YDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRK
60 70 80 90 100 110
80 90 100 110 120 130
pF1KE3 IASLYGSDKFDLPYGMRTSAEYFRLALSKLQSCDLFDEFDNIPCKKCVVVGNGGVLKNKT
: . .: :.:.. . . .. :: . : .:.. :..:..::::::: ::.
CCDS49 WARIR---EFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKS
120 130 140 150 160 170
140 150 160 170 180 190
pF1KE3 LGEKIDSYDVIIRMNNGPVLGHEEEVGRRTTFRLFYPESVFSDPIHNDPNTTVILTAFKP
:: .::.::...:.:..:: : :..:: .::.:. :::.... : . . .. .:..::
CCDS49 LGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKW
180 190 200 210 220 230
200 210 220 230 240 250
pF1KE3 HDLRWLLELLMGDKIN-TNGFWKKPALNLIYKPYQIRILDPFIIRTAAYELLHFPKVFPK
.:..:: ... .... ..::::. : . .: .::::.:..:. ::. :. .:
CCDS49 QDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGL
240 250 260 270 280 290
260 270 280 290 300 310
pF1KE3 NQKPKHPTTGIIAITLAFYICHEVHLAGFKYNFSDLKSPLHYYGNATMSLMNKNAYHNVT
. . :: : .:.:.:.. : :: .::: :..: ..::::: .. :. .... ::.
CCDS49 MGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQ
300 310 320 330 340 350
320 330
pF1KE3 AEQLFLKDIIEKNLVINLTQD
:. ::. ... .. .:.
CCDS49 REKEFLRKLVKARVITDLSSGI
360 370
>>CCDS494.1 ST3GAL3 gene_id:6487|Hs109|chr1 (390 aa)
initn: 671 init1: 332 opt: 667 Z-score: 859.3 bits: 167.6 E(33420): 1.6e-41
Smith-Waterman score: 667; 34.3% identity (68.9% similar) in 289 aa overlap (48-329:102-387)
20 30 40 50 60 70
pF1KE3 VLHCILWGTNVYWVAPVEMKRRNKIQPCLSKPAFASLL------RFHQFHPFLCAADFRK
::..:: : :: . :.. .:::
CCDS49 YDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRK
80 90 100 110 120 130
80 90 100 110 120 130
pF1KE3 IASLYGSDKFDLPYGMRTSAEYFRLALSKLQSCDLFDEFDNIPCKKCVVVGNGGVLKNKT
: . .: :.:.. . . .. :: . : .:.. :..:..::::::: ::.
CCDS49 WARIR---EFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKS
140 150 160 170 180
140 150 160 170 180 190
pF1KE3 LGEKIDSYDVIIRMNNGPVLGHEEEVGRRTTFRLFYPESVFSDPIHNDPNTTVILTAFKP
:: .::.::...:.:..:: : :..:: .::.:. :::.... : . . .. .:..::
CCDS49 LGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKW
190 200 210 220 230 240
200 210 220 230 240 250
pF1KE3 HDLRWLLELLMGDKIN-TNGFWKKPALNLIYKPYQIRILDPFIIRTAAYELLHFPKVFPK
.:..:: ... .... ..::::. : . .: .::::.:..:. ::. :. .:
CCDS49 QDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGL
250 260 270 280 290 300
260 270 280 290 300 310
pF1KE3 NQKPKHPTTGIIAITLAFYICHEVHLAGFKYNFSDLKSPLHYYGNATMSLMNKNAYHNVT
. . :: : .:.:.:.. : :: .::: :..: ..::::: .. :. .... ::.
CCDS49 MGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQ
310 320 330 340 350 360
320 330
pF1KE3 AEQLFLKDIIEKNLVINLTQD
:. ::. ... .. .:.
CCDS49 REKEFLRKLVKARVITDLSSGI
370 380 390
>>CCDS498.1 ST3GAL3 gene_id:6487|Hs109|chr1 (413 aa)
initn: 651 init1: 332 opt: 667 Z-score: 858.9 bits: 167.6 E(33420): 1.7e-41
Smith-Waterman score: 667; 34.3% identity (68.9% similar) in 289 aa overlap (48-329:125-410)
20 30 40 50 60 70
pF1KE3 VLHCILWGTNVYWVAPVEMKRRNKIQPCLSKPAFASLL------RFHQFHPFLCAADFRK
::..:: : :: . :.. .:::
CCDS49 EDTAFALGFLKLPRPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRK
100 110 120 130 140 150
80 90 100 110 120 130
pF1KE3 IASLYGSDKFDLPYGMRTSAEYFRLALSKLQSCDLFDEFDNIPCKKCVVVGNGGVLKNKT
: . .: :.:.. . . .. :: . : .:.. :..:..::::::: ::.
CCDS49 WARIR---EFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKS
160 170 180 190 200 210
140 150 160 170 180 190
pF1KE3 LGEKIDSYDVIIRMNNGPVLGHEEEVGRRTTFRLFYPESVFSDPIHNDPNTTVILTAFKP
:: .::.::...:.:..:: : :..:: .::.:. :::.... : . . .. .:..::
CCDS49 LGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKW
220 230 240 250 260 270
200 210 220 230 240 250
pF1KE3 HDLRWLLELLMGDKIN-TNGFWKKPALNLIYKPYQIRILDPFIIRTAAYELLHFPKVFPK
.:..:: ... .... ..::::. : . .: .::::.:..:. ::. :. .:
CCDS49 QDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGL
280 290 300 310 320 330
260 270 280 290 300 310
pF1KE3 NQKPKHPTTGIIAITLAFYICHEVHLAGFKYNFSDLKSPLHYYGNATMSLMNKNAYHNVT
. . :: : .:.:.:.. : :: .::: :..: ..::::: .. :. .... ::.
CCDS49 MGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQ
340 350 360 370 380 390
320 330
pF1KE3 AEQLFLKDIIEKNLVINLTQD
:. ::. ... .. .:.
CCDS49 REKEFLRKLVKARVITDLSSGI
400 410
331 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Aug 4 20:39:21 2021 done: Wed Aug 4 20:39:21 2021
Total Scan time: 1.160 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]