Result of FASTA (omim) for
pFN21AE3804
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3804, 199 aa
1>>>pF1KE3804 199 - 199 aa - 199 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0672+/-0.000476; mu= 15.0719+/- 0.030
mean_var=89.6553+/-19.033, 0's: 0 Z-trim(111.1): 453 B-trim: 383 in 1/49
Lambda= 0.135452
statistics sampled from 19059 (19582) to 19059 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.23), width: 16
Scan time: 4.760
The best scores are: opt bits E(85289)
NP_004628 (OMIM: 600882,602298) ras-related protei ( 207) 618 130.8 1.5e-30
NP_004242 (OMIM: 300284) ras-related protein Rab-9 ( 201) 508 109.3 4.2e-24
NP_001182257 (OMIM: 300284) ras-related protein Ra ( 201) 508 109.3 4.2e-24
XP_016885453 (OMIM: 300284) PREDICTED: ras-related ( 201) 508 109.3 4.2e-24
NP_057454 (OMIM: 300285) ras-related protein Rab-9 ( 201) 493 106.4 3.2e-23
NP_001265596 (OMIM: 201000,606144) ras-related pro ( 237) 412 90.6 2.1e-18
NP_057361 (OMIM: 201000,606144) ras-related protei ( 237) 412 90.6 2.1e-18
NP_899050 (OMIM: 201000,606144) ras-related protei ( 237) 412 90.6 2.1e-18
NP_001265595 (OMIM: 201000,606144) ras-related pro ( 237) 412 90.6 2.1e-18
NP_001265597 (OMIM: 201000,606144) ras-related pro ( 237) 412 90.6 2.1e-18
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 411 90.4 2.3e-18
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 408 89.8 3.3e-18
NP_006825 (OMIM: 612906) ras-related protein Rab-3 ( 225) 408 89.8 3.5e-18
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 401 88.4 8.3e-18
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 401 88.4 8.5e-18
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 394 87.0 2.1e-17
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 392 86.7 2.9e-17
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 389 86.1 4.2e-17
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 388 85.9 4.9e-17
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 386 85.5 6.6e-17
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 386 85.5 6.6e-17
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 386 85.5 6.6e-17
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 386 85.5 6.6e-17
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 384 85.1 9e-17
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 384 85.1 9e-17
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 383 84.9 9.6e-17
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 383 84.9 9.6e-17
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 383 84.9 9.6e-17
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 383 84.9 9.6e-17
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 382 84.7 1.1e-16
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 381 84.5 1.3e-16
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 380 84.3 1.5e-16
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 380 84.3 1.5e-16
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 380 84.3 1.5e-16
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 380 84.3 1.5e-16
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 377 83.7 2.2e-16
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 376 83.6 2.6e-16
NP_071732 (OMIM: 606281) ras-related protein Rab-3 ( 211) 374 83.2 3.3e-16
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 373 83.0 3.8e-16
XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195) 371 82.5 4.7e-16
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 372 82.8 4.8e-16
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 371 82.6 5.1e-16
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 371 82.6 5.1e-16
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 371 82.6 5.1e-16
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 371 82.6 5.1e-16
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 371 82.6 5.1e-16
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 371 82.6 5.1e-16
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 371 82.6 5.6e-16
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 370 82.4 5.6e-16
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 361 80.6 1.9e-15
>>NP_004628 (OMIM: 600882,602298) ras-related protein Ra (207 aa)
initn: 584 init1: 390 opt: 618 Z-score: 669.7 bits: 130.8 E(85289): 1.5e-30
Smith-Waterman score: 618; 49.2% identity (77.4% similar) in 195 aa overlap (1-192:1-195)
10 20 30 40 50 60
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
:. :::: ::.::.: :::::::..:::.: : ..:..:.::..:.: ... : . .:
NP_004 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
10 20 30 40 50 60
70 80 90 100 110
pF1KE3 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM
::::.:::::.:. .::.:.: :.:.:::: ..:..:: :: . : . : . ...:.
NP_004 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 VLLGNKIDLADRKVPQEVAQGWCREKD-IPYFEVSAKNDINVVQAFEMLASRALSRYQSI
:.::::::: .:.: . ::.:: :. :::::.:::. ::: :::. .: ::.. .
NP_004 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
130 140 150 160 170 180
180 190
pF1KE3 -LENHLTESIKLSPDQSRSRCC
: :.. : :::. .
NP_004 ELYNEFPEPIKLDKNDRAKASAESCSC
190 200
>>NP_004242 (OMIM: 300284) ras-related protein Rab-9A [H (201 aa)
initn: 451 init1: 271 opt: 508 Z-score: 553.7 bits: 109.3 E(85289): 4.2e-24
Smith-Waterman score: 508; 42.6% identity (70.6% similar) in 197 aa overlap (9-199:8-201)
10 20 30 40 50 60
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
.:.:..: ::::.::...:: . : . :.:. .:.: . . . .:
NP_004 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQ
10 20 30 40 50
70 80 90 100 110
pF1KE3 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKI-VPMEQSYPM
::::.:::::::. . ::.::: :.:.:.: : .::. :. :. . . : .:.:.
NP_004 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 VLLGNKIDLADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRYQSI
:.::::::...:.: : ::.:::.. : ::::.:::. ::. ::: . :.:. .
NP_004 VILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDR-
120 130 140 150 160 170
180 190
pF1KE3 LENHL--TESIKL--SPDQSRSRCC
.:: :....: .: : : ::
NP_004 -SDHLIQTDTVNLHRKPKPSSS-CC
180 190 200
>>NP_001182257 (OMIM: 300284) ras-related protein Rab-9A (201 aa)
initn: 451 init1: 271 opt: 508 Z-score: 553.7 bits: 109.3 E(85289): 4.2e-24
Smith-Waterman score: 508; 42.6% identity (70.6% similar) in 197 aa overlap (9-199:8-201)
10 20 30 40 50 60
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
.:.:..: ::::.::...:: . : . :.:. .:.: . . . .:
NP_001 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQ
10 20 30 40 50
70 80 90 100 110
pF1KE3 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKI-VPMEQSYPM
::::.:::::::. . ::.::: :.:.:.: : .::. :. :. . . : .:.:.
NP_001 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 VLLGNKIDLADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRYQSI
:.::::::...:.: : ::.:::.. : ::::.:::. ::. ::: . :.:. .
NP_001 VILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDR-
120 130 140 150 160 170
180 190
pF1KE3 LENHL--TESIKL--SPDQSRSRCC
.:: :....: .: : : ::
NP_001 -SDHLIQTDTVNLHRKPKPSSS-CC
180 190 200
>>XP_016885453 (OMIM: 300284) PREDICTED: ras-related pro (201 aa)
initn: 451 init1: 271 opt: 508 Z-score: 553.7 bits: 109.3 E(85289): 4.2e-24
Smith-Waterman score: 508; 42.6% identity (70.6% similar) in 197 aa overlap (9-199:8-201)
10 20 30 40 50 60
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
.:.:..: ::::.::...:: . : . :.:. .:.: . . . .:
XP_016 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQ
10 20 30 40 50
70 80 90 100 110
pF1KE3 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKI-VPMEQSYPM
::::.:::::::. . ::.::: :.:.:.: : .::. :. :. . . : .:.:.
XP_016 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 VLLGNKIDLADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRYQSI
:.::::::...:.: : ::.:::.. : ::::.:::. ::. ::: . :.:. .
XP_016 VILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDR-
120 130 140 150 160 170
180 190
pF1KE3 LENHL--TESIKL--SPDQSRSRCC
.:: :....: .: : : ::
XP_016 -SDHLIQTDTVNLHRKPKPSSS-CC
180 190 200
>>NP_057454 (OMIM: 300285) ras-related protein Rab-9B [H (201 aa)
initn: 481 init1: 285 opt: 493 Z-score: 537.8 bits: 106.4 E(85289): 3.2e-23
Smith-Waterman score: 493; 40.9% identity (69.2% similar) in 198 aa overlap (5-199:4-201)
10 20 30 40 50 60
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
:.. ::.:..: ::::.::...:: . : . :.:. .:.. . . . ::
NP_057 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQ
10 20 30 40 50
70 80 90 100 110
pF1KE3 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKI-VPMEQSYPM
::::.:::::.:. . ::.:.: :.:.:.: : .::: : :. . . : . .:.
NP_057 IWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 VLLGNKIDLADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRYQSI
:.::::.: ::.: : :: :: :. : ::.:.:::.: ::. ::: . ..:. ...
NP_057 VVLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQL
120 130 140 150 160 170
180 190
pF1KE3 LENHLTESIKL-SPDQSRSRCC
. : ..: : : ... : ::
NP_057 EHCMLGHTIDLNSGSKAGSSCC
180 190 200
>>NP_001265596 (OMIM: 201000,606144) ras-related protein (237 aa)
initn: 318 init1: 286 opt: 412 Z-score: 451.4 bits: 90.6 E(85289): 2.1e-18
Smith-Waterman score: 412; 35.9% identity (76.6% similar) in 184 aa overlap (6-186:7-186)
10 20 30 40 50
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKL
.: .:...:: .:::.:....: . : ..:. :.:...: . : ..: ..:
NP_001 MLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 QIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPM
..:::.:::.: ......:.:...:.:.:..:: :::::.. :: :.:.. . :
NP_001 MLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDI----PT
70 80 90 100 110
120 130 140 150 160 170
pF1KE3 VLLGNKIDLADRK-VPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRY-QS
::. ::::: : . . .: :.. .. . ....:.:.:.:: ..:..:: . :.. :.
NP_001 VLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQ
120 130 140 150 160 170
180 190
pF1KE3 ILEN-HLTESIKLSPDQSRSRCC
: :. .::.:
NP_001 IAEDPELTHSSSNKIGVFNTSGGSHSGQNSGTLNGGDVINLRPNKQRTKKNRNPFSSCSI
180 190 200 210 220 230
>>NP_057361 (OMIM: 201000,606144) ras-related protein Ra (237 aa)
initn: 318 init1: 286 opt: 412 Z-score: 451.4 bits: 90.6 E(85289): 2.1e-18
Smith-Waterman score: 412; 35.9% identity (76.6% similar) in 184 aa overlap (6-186:7-186)
10 20 30 40 50
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKL
.: .:...:: .:::.:....: . : ..:. :.:...: . : ..: ..:
NP_057 MLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 QIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPM
..:::.:::.: ......:.:...:.:.:..:: :::::.. :: :.:.. . :
NP_057 MLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDI----PT
70 80 90 100 110
120 130 140 150 160 170
pF1KE3 VLLGNKIDLADRK-VPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRY-QS
::. ::::: : . . .: :.. .. . ....:.:.:.:: ..:..:: . :.. :.
NP_057 VLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQ
120 130 140 150 160 170
180 190
pF1KE3 ILEN-HLTESIKLSPDQSRSRCC
: :. .::.:
NP_057 IAEDPELTHSSSNKIGVFNTSGGSHSGQNSGTLNGGDVINLRPNKQRTKKNRNPFSSCSI
180 190 200 210 220 230
>>NP_899050 (OMIM: 201000,606144) ras-related protein Ra (237 aa)
initn: 318 init1: 286 opt: 412 Z-score: 451.4 bits: 90.6 E(85289): 2.1e-18
Smith-Waterman score: 412; 35.9% identity (76.6% similar) in 184 aa overlap (6-186:7-186)
10 20 30 40 50
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKL
.: .:...:: .:::.:....: . : ..:. :.:...: . : ..: ..:
NP_899 MLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 QIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPM
..:::.:::.: ......:.:...:.:.:..:: :::::.. :: :.:.. . :
NP_899 MLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDI----PT
70 80 90 100 110
120 130 140 150 160 170
pF1KE3 VLLGNKIDLADRK-VPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRY-QS
::. ::::: : . . .: :.. .. . ....:.:.:.:: ..:..:: . :.. :.
NP_899 VLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQ
120 130 140 150 160 170
180 190
pF1KE3 ILEN-HLTESIKLSPDQSRSRCC
: :. .::.:
NP_899 IAEDPELTHSSSNKIGVFNTSGGSHSGQNSGTLNGGDVINLRPNKQRTKKNRNPFSSCSI
180 190 200 210 220 230
>>NP_001265595 (OMIM: 201000,606144) ras-related protein (237 aa)
initn: 318 init1: 286 opt: 412 Z-score: 451.4 bits: 90.6 E(85289): 2.1e-18
Smith-Waterman score: 412; 35.9% identity (76.6% similar) in 184 aa overlap (6-186:7-186)
10 20 30 40 50
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKL
.: .:...:: .:::.:....: . : ..:. :.:...: . : ..: ..:
NP_001 MLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 QIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPM
..:::.:::.: ......:.:...:.:.:..:: :::::.. :: :.:.. . :
NP_001 MLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDI----PT
70 80 90 100 110
120 130 140 150 160 170
pF1KE3 VLLGNKIDLADRK-VPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRY-QS
::. ::::: : . . .: :.. .. . ....:.:.:.:: ..:..:: . :.. :.
NP_001 VLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQ
120 130 140 150 160 170
180 190
pF1KE3 ILEN-HLTESIKLSPDQSRSRCC
: :. .::.:
NP_001 IAEDPELTHSSSNKIGVFNTSGGSHSGQNSGTLNGGDVINLRPNKQRTKKNRNPFSSCSI
180 190 200 210 220 230
>>NP_001265597 (OMIM: 201000,606144) ras-related protein (237 aa)
initn: 318 init1: 286 opt: 412 Z-score: 451.4 bits: 90.6 E(85289): 2.1e-18
Smith-Waterman score: 412; 35.9% identity (76.6% similar) in 184 aa overlap (6-186:7-186)
10 20 30 40 50
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKL
.: .:...:: .:::.:....: . : ..:. :.:...: . : ..: ..:
NP_001 MLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 QIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPM
..:::.:::.: ......:.:...:.:.:..:: :::::.. :: :.:.. . :
NP_001 MLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDI----PT
70 80 90 100 110
120 130 140 150 160 170
pF1KE3 VLLGNKIDLADRK-VPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRY-QS
::. ::::: : . . .: :.. .. . ....:.:.:.:: ..:..:: . :.. :.
NP_001 VLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQ
120 130 140 150 160 170
180 190
pF1KE3 ILEN-HLTESIKLSPDQSRSRCC
: :. .::.:
NP_001 IAEDPELTHSSSNKIGVFNTSGGSHSGQNSGTLNGGDVINLRPNKQRTKKNRNPFSSCSI
180 190 200 210 220 230
199 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 06:40:20 2016 done: Sun Nov 6 06:40:21 2016
Total Scan time: 4.760 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]