Result of FASTA (omim) for
pFN21AE3774
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3774, 219 aa
1>>>pF1KE3774 219 - 219 aa - 219 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0090+/-0.000458; mu= 15.4174+/- 0.029
mean_var=84.9833+/-16.777, 0's: 0 Z-trim(110.8): 443 B-trim: 0 in 0/50
Lambda= 0.139126
statistics sampled from 18737 (19256) to 18737 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.604), E-opt: 0.2 (0.226), width: 16
Scan time: 5.120
The best scores are: opt bits E(85289)
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 1443 299.7 2.6e-81
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 1443 299.7 2.6e-81
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 1211 253.1 2.7e-67
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 1211 253.1 2.7e-67
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 1172 245.3 6.1e-65
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 1172 245.3 6.1e-65
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 1131 237.0 1.8e-62
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 650 140.5 2e-33
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 650 140.5 2.1e-33
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 638 138.0 1e-32
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 638 138.0 1.1e-32
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 618 134.0 1.7e-31
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 604 131.2 1.2e-30
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 598 130.0 2.7e-30
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 574 125.2 7.7e-29
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 557 121.9 9.4e-28
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 514 113.2 3.5e-25
XP_016873867 (OMIM: 612565) PREDICTED: ras-related ( 237) 510 112.4 6.4e-25
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 509 112.2 7.7e-25
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 507 111.7 8.5e-25
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 507 111.8 9.4e-25
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 503 111.0 1.6e-24
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 501 110.5 2e-24
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 494 109.2 5.5e-24
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 494 109.2 5.5e-24
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 494 109.2 5.5e-24
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 494 109.2 5.6e-24
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 489 108.1 1.1e-23
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 489 108.1 1.1e-23
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 489 108.1 1.1e-23
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 489 108.1 1.1e-23
XP_011519340 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 490 108.7 1.7e-23
XP_011519339 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 490 108.7 1.7e-23
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 484 107.1 2e-23
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 484 107.2 2.2e-23
NP_001138430 (OMIM: 614178) EF-hand calcium-bindin ( 731) 490 108.9 2.3e-23
XP_006719084 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 490 108.9 2.3e-23
XP_011519338 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 490 108.9 2.3e-23
XP_011519336 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 490 108.9 2.3e-23
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 476 105.5 6.7e-23
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 468 103.9 2e-22
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 468 103.9 2e-22
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 468 103.9 2.1e-22
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 465 103.3 3.1e-22
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 462 102.7 4.6e-22
XP_011520750 (OMIM: 605455) PREDICTED: ras-related ( 231) 454 101.2 1.5e-21
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213) 453 100.9 1.6e-21
NP_001193765 (OMIM: 605570) ras-related protein Ra ( 155) 439 98.0 9.3e-21
NP_001265596 (OMIM: 201000,606144) ras-related pro ( 237) 441 98.6 9.4e-21
NP_001265595 (OMIM: 201000,606144) ras-related pro ( 237) 441 98.6 9.4e-21
>>NP_002858 (OMIM: 179510) ras-related protein Rab-3B [H (219 aa)
initn: 1443 init1: 1443 opt: 1443 Z-score: 1580.9 bits: 299.7 E(85289): 2.6e-81
Smith-Waterman score: 1443; 100.0% identity (100.0% similar) in 219 aa overlap (1-219:1-219)
10 20 30 40 50 60
pF1KE3 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
130 140 150 160 170 180
190 200 210
pF1KE3 DAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
:::::::::::::::::::::::::::::::::::::::
NP_002 DAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
190 200 210
>>XP_016857447 (OMIM: 179510) PREDICTED: ras-related pro (219 aa)
initn: 1443 init1: 1443 opt: 1443 Z-score: 1580.9 bits: 299.7 E(85289): 2.6e-81
Smith-Waterman score: 1443; 100.0% identity (100.0% similar) in 219 aa overlap (1-219:1-219)
10 20 30 40 50 60
pF1KE3 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
130 140 150 160 170 180
190 200 210
pF1KE3 DAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
:::::::::::::::::::::::::::::::::::::::
XP_016 DAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
190 200 210
>>NP_001304844 (OMIM: 612829) ras-related protein Rab-3C (225 aa)
initn: 1231 init1: 1211 opt: 1211 Z-score: 1329.1 bits: 253.1 E(85289): 2.7e-67
Smith-Waterman score: 1211; 80.8% identity (95.0% similar) in 219 aa overlap (1-219:7-225)
10 20 30 40 50
pF1KE3 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVST
:::. :.. : ::.:::::::::::::::::::::::::::::::.:: :::::
NP_001 MELYGKMASAQDARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVST
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 VGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQ
::::::::::...:::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 VGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 DWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQ
::.:::::::::::::::::::::::.:::. ::.:: :.:::::.:::.:::.::.:.:
NP_001 DWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQ
130 140 150 160 170 180
180 190 200 210
pF1KE3 AFERLVDAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
.:::::: ::::::.::.:::.. ....::::..::: : ::.:
NP_001 TFERLVDIICDKMSESLETDPAITAAKQNTRLKETPPPPQPNCAC
190 200 210 220
>>NP_612462 (OMIM: 612829) ras-related protein Rab-3C is (227 aa)
initn: 1231 init1: 1211 opt: 1211 Z-score: 1329.0 bits: 253.1 E(85289): 2.7e-67
Smith-Waterman score: 1211; 80.8% identity (95.0% similar) in 219 aa overlap (1-219:9-227)
10 20 30 40 50
pF1KE3 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV
:::. :.. : ::.:::::::::::::::::::::::::::::::.:: :::
NP_612 MRHEAPMQMASAQDARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 STVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNA
::::::::::::...:::.:::::::::::::::::::::::::::::::::::::::::
NP_612 STVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 VQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISV
::::.:::::::::::::::::::::::.:::. ::.:: :.:::::.:::.:::.::.:
NP_612 VQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINV
130 140 150 160 170 180
180 190 200 210
pF1KE3 RQAFERLVDAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
.:.:::::: ::::::.::.:::.. ....::::..::: : ::.:
NP_612 KQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPPPPQPNCAC
190 200 210 220
>>NP_002857 (OMIM: 179490) ras-related protein Rab-3A [H (220 aa)
initn: 1141 init1: 1107 opt: 1172 Z-score: 1286.9 bits: 245.3 E(85289): 6.1e-65
Smith-Waterman score: 1172; 77.9% identity (95.0% similar) in 222 aa overlap (1-219:1-220)
10 20 30 40 50 60
pF1KE3 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
:::.::.. : :..::::::::::.::::::::::::::::::::.::::::::::::::
NP_002 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
:::.::..::.:::::::::::::::::::::::::::::::::::::::::::::.:::
NP_002 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
::::::::::.:::::::::.:::: .:.:. ::..:::.:::::::.::.:.:.:::::
NP_002 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
130 140 150 160 170 180
190 200 210
pF1KE3 DAICDKMSDSLDT-DPSMLGSSKNTRLSD--TPPLLQQNCSC
:.::.:::.:::: ::.. :.... .::: .:: .:.:.:
NP_002 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPP--HQDCAC
190 200 210 220
>>XP_011526466 (OMIM: 179490) PREDICTED: ras-related pro (220 aa)
initn: 1141 init1: 1107 opt: 1172 Z-score: 1286.9 bits: 245.3 E(85289): 6.1e-65
Smith-Waterman score: 1172; 77.9% identity (95.0% similar) in 222 aa overlap (1-219:1-220)
10 20 30 40 50 60
pF1KE3 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
:::.::.. : :..::::::::::.::::::::::::::::::::.::::::::::::::
XP_011 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
:::.::..::.:::::::::::::::::::::::::::::::::::::::::::::.:::
XP_011 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
::::::::::.:::::::::.:::: .:.:. ::..:::.:::::::.::.:.:.:::::
XP_011 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
130 140 150 160 170 180
190 200 210
pF1KE3 DAICDKMSDSLDT-DPSMLGSSKNTRLSD--TPPLLQQNCSC
:.::.:::.:::: ::.. :.... .::: .:: .:.:.:
XP_011 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPP--HQDCAC
190 200 210 220
>>NP_004274 (OMIM: 604350) ras-related protein Rab-3D [H (219 aa)
initn: 1131 init1: 1131 opt: 1131 Z-score: 1242.5 bits: 237.0 E(85289): 1.8e-62
Smith-Waterman score: 1131; 75.8% identity (92.7% similar) in 219 aa overlap (1-219:1-219)
10 20 30 40 50 60
pF1KE3 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
:::. : ..: .::.:::::::::::.::::::::::::::::::.::::::::::::::
NP_004 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
:::::::.::.:::::::::::::::::::::::::::.:::::.:.::: :::::::::
NP_004 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
::::::::::::::::::.:.:::::.: :. ::..:::.::::::::::.:.:.:::::
NP_004 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
130 140 150 160 170 180
190 200 210
pF1KE3 DAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
:.::.::..::. . : ...:. ..:.: ..:::
NP_004 DVICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCSC
190 200 210
>>NP_005361 (OMIM: 165040) ras-related protein Rab-8A [H (207 aa)
initn: 654 init1: 633 opt: 650 Z-score: 721.0 bits: 140.5 E(85289): 2e-33
Smith-Waterman score: 650; 49.7% identity (82.7% similar) in 191 aa overlap (17-207:3-192)
10 20 30 40 50 60
pF1KE3 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
...::.::::.::.:.:::: :::...:.:. .:.::.:::::
NP_005 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFK
10 20 30 40
70 80 90 100 110 120
pF1KE3 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
..:. ::.::::::::::::.:::::::::::::..:.::::::.::. ...: .:
NP_005 IRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
. .. ... ...:::::....: : :.:. :: . :. :.:.::: ::.:..:: :.
NP_005 EEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA
110 120 130 140 150 160
190 200 210
pF1KE3 DAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
: ::. .:. . : ::.......
NP_005 RDIKAKMDKKLEGN-SPQGSNQGVKITPDQQKRSSFFRCVLL
170 180 190 200
>>XP_011526322 (OMIM: 165040) PREDICTED: ras-related pro (215 aa)
initn: 660 init1: 639 opt: 650 Z-score: 720.8 bits: 140.5 E(85289): 2.1e-33
Smith-Waterman score: 650; 48.7% identity (80.5% similar) in 195 aa overlap (17-211:3-197)
10 20 30 40 50 60
pF1KE3 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
...::.::::.::.:.:::: :::...:.:. .:.::.:::::
XP_011 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFK
10 20 30 40
70 80 90 100 110 120
pF1KE3 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
..:. ::.::::::::::::.:::::::::::::..:.::::::.::. ...: .:
XP_011 IRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
. .. ... ...:::::....: : :.:. :: . :. :.:.::: ::.:..:: :.
XP_011 EEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA
110 120 130 140 150 160
190 200 210
pF1KE3 DAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
: ::. .: .:. .... :.. :
XP_011 RDIKAKMDKKLGQKDNMVCKDREPWLGEKLPRSLGQGQGWCLITAGSSS
170 180 190 200 210
>>NP_057215 (OMIM: 612672) ras-related protein Rab-10 [H (200 aa)
initn: 638 init1: 638 opt: 638 Z-score: 708.2 bits: 138.0 E(85289): 1e-32
Smith-Waterman score: 638; 53.5% identity (84.1% similar) in 170 aa overlap (17-186:4-173)
10 20 30 40 50 60
pF1KE3 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
...: .::::.::.:.:::: :::..::.:. .:.::.:::::
NP_057 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFK
10 20 30 40
70 80 90 100 110 120
pF1KE3 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
.::: . :..::::::::::::..::::.:::::::..:.::::: .::. .. : .:
NP_057 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
.. .... .:.::::::...:::: ::. .:.. :. :::.::: ::....:: :.
NP_057 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA
110 120 130 140 150 160
190 200 210
pF1KE3 DAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
. : :
NP_057 EDILRKTPVKEPNSENVDISSGGGVTGWKSKCC
170 180 190 200
219 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 18:03:29 2016 done: Mon Nov 7 18:03:30 2016
Total Scan time: 5.120 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]