Result of FASTA (omim) for
pFN21AE3752
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3752, 158 aa
1>>>pF1KE3752 158 - 158 aa - 158 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8917+/-0.000271; mu= 15.5739+/- 0.017
mean_var=72.4122+/-14.756, 0's: 0 Z-trim(119.9): 121 B-trim: 22 in 1/56
Lambda= 0.150719
statistics sampled from 34380 (34506) to 34380 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.787), E-opt: 0.2 (0.405), width: 16
Scan time: 5.590
The best scores are: opt bits E(85289)
NP_919237 (OMIM: 601661) SUMO-conjugating enzyme U ( 158) 1113 250.0 1.2e-66
NP_003336 (OMIM: 601661) SUMO-conjugating enzyme U ( 158) 1113 250.0 1.2e-66
XP_016879129 (OMIM: 601661) PREDICTED: SUMO-conjug ( 158) 1113 250.0 1.2e-66
NP_919236 (OMIM: 601661) SUMO-conjugating enzyme U ( 158) 1113 250.0 1.2e-66
NP_919235 (OMIM: 601661) SUMO-conjugating enzyme U ( 158) 1113 250.0 1.2e-66
XP_011520946 (OMIM: 601661) PREDICTED: SUMO-conjug ( 184) 972 219.4 2.3e-57
XP_005255598 (OMIM: 601661) PREDICTED: SUMO-conjug ( 184) 972 219.4 2.3e-57
XP_011520947 (OMIM: 601661) PREDICTED: SUMO-conjug ( 184) 972 219.4 2.3e-57
XP_005255597 (OMIM: 601661) PREDICTED: SUMO-conjug ( 184) 972 219.4 2.3e-57
NP_003328 (OMIM: 179095) ubiquitin-conjugating enz ( 152) 422 99.7 2e-21
NP_003327 (OMIM: 300860,312180) ubiquitin-conjugat ( 152) 418 98.9 3.6e-21
NP_001269090 (OMIM: 300860,312180) ubiquitin-conju ( 119) 368 87.9 5.6e-18
NP_003330 (OMIM: 602962) ubiquitin-conjugating enz ( 147) 349 83.8 1.1e-16
NP_871621 (OMIM: 602963) ubiquitin-conjugating enz ( 148) 349 83.8 1.2e-16
NP_871616 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16
NP_003331 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16
NP_871615 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16
NP_871618 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16
NP_871617 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16
NP_871619 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16
NP_871620 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16
NP_003329 (OMIM: 602961) ubiquitin-conjugating enz ( 147) 339 81.7 5.2e-16
NP_871622 (OMIM: 602963) ubiquitin-conjugating enz ( 149) 333 80.4 1.3e-15
XP_016865309 (OMIM: 602962) PREDICTED: ubiquitin-c ( 173) 332 80.2 1.7e-15
NP_862821 (OMIM: 602962) ubiquitin-conjugating enz ( 118) 328 79.2 2.3e-15
XP_016864073 (OMIM: 602963) PREDICTED: ubiquitin-c ( 118) 325 78.5 3.6e-15
NP_001287724 (OMIM: 602963) ubiquitin-conjugating ( 118) 325 78.5 3.6e-15
NP_689866 (OMIM: 602163) ubiquitin-conjugating enz ( 201) 317 77.0 1.8e-14
XP_005265489 (OMIM: 602163) PREDICTED: ubiquitin-c ( 201) 317 77.0 1.8e-14
NP_001265483 (OMIM: 604151) ubiquitin-conjugating ( 207) 316 76.8 2.1e-14
NP_006348 (OMIM: 604151) ubiquitin-conjugating enz ( 207) 316 76.8 2.1e-14
NP_001265484 (OMIM: 604151) ubiquitin-conjugating ( 207) 316 76.8 2.1e-14
XP_005246301 (OMIM: 604151) PREDICTED: ubiquitin-c ( 207) 316 76.8 2.1e-14
NP_872619 (OMIM: 604151) ubiquitin-conjugating enz ( 207) 316 76.8 2.1e-14
NP_001189405 (OMIM: 602916) ubiquitin-conjugating ( 160) 312 75.8 3.2e-14
NP_872607 (OMIM: 602916) ubiquitin-conjugating enz ( 176) 310 75.4 4.7e-14
NP_003332 (OMIM: 602916) ubiquitin-conjugating enz ( 193) 310 75.5 5e-14
NP_055316 (OMIM: 610309) ubiquitin-conjugating enz ( 222) 310 75.5 5.6e-14
NP_054895 (OMIM: 610538,616435) ubiquitin-conjugat ( 197) 298 72.9 3.1e-13
NP_003339 (OMIM: 603679) ubiquitin-conjugating enz ( 152) 295 72.1 4e-13
XP_016872098 (OMIM: 602961) PREDICTED: ubiquitin-c ( 110) 290 70.9 6.8e-13
NP_001297255 (OMIM: 610538,616435) ubiquitin-conju ( 167) 291 71.3 7.9e-13
NP_001191809 (OMIM: 602961) ubiquitin-conjugating ( 109) 285 69.8 1.4e-12
NP_008950 (OMIM: 605574) ubiquitin-conjugating enz ( 179) 274 67.6 1.1e-11
NP_003960 (OMIM: 603173) NEDD8-conjugating enzyme ( 183) 272 67.2 1.5e-11
NP_861517 (OMIM: 605574) ubiquitin-conjugating enz ( 140) 267 66.0 2.6e-11
NP_003334 (OMIM: 603124) ubiquitin-conjugating enz ( 165) 265 65.6 3.9e-11
NP_005330 (OMIM: 602846) ubiquitin-conjugating enz ( 200) 264 65.5 5.3e-11
XP_005265490 (OMIM: 602163) PREDICTED: ubiquitin-c ( 189) 261 64.8 8e-11
NP_003338 (OMIM: 603721) ubiquitin-conjugating enz ( 154) 256 63.6 1.5e-10
>>NP_919237 (OMIM: 601661) SUMO-conjugating enzyme UBC9 (158 aa)
initn: 1113 init1: 1113 opt: 1113 Z-score: 1317.6 bits: 250.0 E(85289): 1.2e-66
Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158)
10 20 30 40 50 60
pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_919 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_919 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
70 80 90 100 110 120
130 140 150
pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
::::::::::::::::::::::::::::::::::::::
NP_919 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
130 140 150
>>NP_003336 (OMIM: 601661) SUMO-conjugating enzyme UBC9 (158 aa)
initn: 1113 init1: 1113 opt: 1113 Z-score: 1317.6 bits: 250.0 E(85289): 1.2e-66
Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158)
10 20 30 40 50 60
pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
70 80 90 100 110 120
130 140 150
pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
::::::::::::::::::::::::::::::::::::::
NP_003 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
130 140 150
>>XP_016879129 (OMIM: 601661) PREDICTED: SUMO-conjugatin (158 aa)
initn: 1113 init1: 1113 opt: 1113 Z-score: 1317.6 bits: 250.0 E(85289): 1.2e-66
Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158)
10 20 30 40 50 60
pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
70 80 90 100 110 120
130 140 150
pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
::::::::::::::::::::::::::::::::::::::
XP_016 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
130 140 150
>>NP_919236 (OMIM: 601661) SUMO-conjugating enzyme UBC9 (158 aa)
initn: 1113 init1: 1113 opt: 1113 Z-score: 1317.6 bits: 250.0 E(85289): 1.2e-66
Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158)
10 20 30 40 50 60
pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_919 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_919 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
70 80 90 100 110 120
130 140 150
pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
::::::::::::::::::::::::::::::::::::::
NP_919 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
130 140 150
>>NP_919235 (OMIM: 601661) SUMO-conjugating enzyme UBC9 (158 aa)
initn: 1113 init1: 1113 opt: 1113 Z-score: 1317.6 bits: 250.0 E(85289): 1.2e-66
Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158)
10 20 30 40 50 60
pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_919 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_919 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
70 80 90 100 110 120
130 140 150
pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
::::::::::::::::::::::::::::::::::::::
NP_919 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
130 140 150
>>XP_011520946 (OMIM: 601661) PREDICTED: SUMO-conjugatin (184 aa)
initn: 972 init1: 972 opt: 972 Z-score: 1151.0 bits: 219.4 E(85289): 2.3e-57
Smith-Waterman score: 972; 100.0% identity (100.0% similar) in 137 aa overlap (1-137:1-137)
10 20 30 40 50 60
pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
70 80 90 100 110 120
130 140 150
pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
:::::::::::::::::
XP_011 NEPNIQDPAQAEAYTIYWLVAALAPLVAAPPRPSQGRLAGREWRTQAHPTDSQGPRLCGE
130 140 150 160 170 180
>>XP_005255598 (OMIM: 601661) PREDICTED: SUMO-conjugatin (184 aa)
initn: 972 init1: 972 opt: 972 Z-score: 1151.0 bits: 219.4 E(85289): 2.3e-57
Smith-Waterman score: 972; 100.0% identity (100.0% similar) in 137 aa overlap (1-137:1-137)
10 20 30 40 50 60
pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
70 80 90 100 110 120
130 140 150
pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
:::::::::::::::::
XP_005 NEPNIQDPAQAEAYTIYWLVAALAPLVAAPPRPSQGRLAGREWRTQAHPTDSQGPRLCGE
130 140 150 160 170 180
>>XP_011520947 (OMIM: 601661) PREDICTED: SUMO-conjugatin (184 aa)
initn: 972 init1: 972 opt: 972 Z-score: 1151.0 bits: 219.4 E(85289): 2.3e-57
Smith-Waterman score: 972; 100.0% identity (100.0% similar) in 137 aa overlap (1-137:1-137)
10 20 30 40 50 60
pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
70 80 90 100 110 120
130 140 150
pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
:::::::::::::::::
XP_011 NEPNIQDPAQAEAYTIYWLVAALAPLVAAPPRPSQGRLAGREWRTQAHPTDSQGPRLCGE
130 140 150 160 170 180
>>XP_005255597 (OMIM: 601661) PREDICTED: SUMO-conjugatin (184 aa)
initn: 972 init1: 972 opt: 972 Z-score: 1151.0 bits: 219.4 E(85289): 2.3e-57
Smith-Waterman score: 972; 100.0% identity (100.0% similar) in 137 aa overlap (1-137:1-137)
10 20 30 40 50 60
pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
70 80 90 100 110 120
130 140 150
pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
:::::::::::::::::
XP_005 NEPNIQDPAQAEAYTIYWLVAALAPLVAAPPRPSQGRLAGREWRTQAHPTDSQGPRLCGE
130 140 150 160 170 180
>>NP_003328 (OMIM: 179095) ubiquitin-conjugating enzyme (152 aa)
initn: 404 init1: 239 opt: 422 Z-score: 505.8 bits: 99.7 E(85289): 2e-21
Smith-Waterman score: 422; 42.7% identity (70.7% similar) in 150 aa overlap (1-150:1-143)
10 20 30 40 50 60
pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL
:: : :: .. : ..: : : ..:..: :.:.:. .: : .:::.: : :::
NP_003 MSTPARRRLMRDFKRLQEDPPVGVSGAPSEN-----NIMQWNAVIFGPEGTPFEDGTFKL
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL
. :...::..:: .: .:::::: .:..::.::.. : :. ...:: .:: ::
NP_003 VIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNR--WSPTYDVSSILTSIQSLL
60 70 80 90 100 110
130 140 150
pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
.::: ..::...: .: .:. :::::: :
NP_003 DEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSWNDS
120 130 140 150
158 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 07:53:04 2016 done: Sun Nov 6 07:53:05 2016
Total Scan time: 5.590 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]