Result of FASTA (omim) for
pFN21AE3751
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3751, 1469 aa
1>>>pF1KE3751 1469 - 1469 aa - 1469 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.1309+/-0.000435; mu= -12.0561+/- 0.027
mean_var=513.4586+/-105.799, 0's: 0 Z-trim(123.2): 103 B-trim: 0 in 0/60
Lambda= 0.056601
statistics sampled from 42551 (42691) to 42551 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.78), E-opt: 0.2 (0.501), width: 16
Scan time: 21.820
The best scores are: opt bits E(85289)
XP_006717304 (OMIM: 602777) PREDICTED: snRNA-activ (1469) 9852 820.5 0
XP_005266153 (OMIM: 602777) PREDICTED: snRNA-activ (1469) 9852 820.5 0
XP_006717305 (OMIM: 602777) PREDICTED: snRNA-activ (1469) 9852 820.5 0
NP_003077 (OMIM: 602777) snRNA-activating protein (1469) 9852 820.5 0
XP_006717307 (OMIM: 602777) PREDICTED: snRNA-activ ( 873) 5160 437.2 2.7e-121
XP_016870547 (OMIM: 602777) PREDICTED: snRNA-activ (1441) 5109 433.2 7e-120
>>XP_006717304 (OMIM: 602777) PREDICTED: snRNA-activatin (1469 aa)
initn: 9852 init1: 9852 opt: 9852 Z-score: 4366.3 bits: 820.5 E(85289): 0
Smith-Waterman score: 9852; 100.0% identity (100.0% similar) in 1469 aa overlap (1-1469:1-1469)
10 20 30 40 50 60
pF1KE3 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE3 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE3 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE3 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE3 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE3 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE3 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE3 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE3 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE3 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE3 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS
1390 1400 1410 1420 1430 1440
1450 1460
pF1KE3 CLDTSNDPDDLDVLRTRHARHTRKRRRLV
:::::::::::::::::::::::::::::
XP_006 CLDTSNDPDDLDVLRTRHARHTRKRRRLV
1450 1460
>>XP_005266153 (OMIM: 602777) PREDICTED: snRNA-activatin (1469 aa)
initn: 9852 init1: 9852 opt: 9852 Z-score: 4366.3 bits: 820.5 E(85289): 0
Smith-Waterman score: 9852; 100.0% identity (100.0% similar) in 1469 aa overlap (1-1469:1-1469)
10 20 30 40 50 60
pF1KE3 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE3 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE3 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE3 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE3 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE3 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE3 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE3 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE3 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE3 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE3 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS
1390 1400 1410 1420 1430 1440
1450 1460
pF1KE3 CLDTSNDPDDLDVLRTRHARHTRKRRRLV
:::::::::::::::::::::::::::::
XP_005 CLDTSNDPDDLDVLRTRHARHTRKRRRLV
1450 1460
>>XP_006717305 (OMIM: 602777) PREDICTED: snRNA-activatin (1469 aa)
initn: 9852 init1: 9852 opt: 9852 Z-score: 4366.3 bits: 820.5 E(85289): 0
Smith-Waterman score: 9852; 100.0% identity (100.0% similar) in 1469 aa overlap (1-1469:1-1469)
10 20 30 40 50 60
pF1KE3 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE3 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE3 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE3 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE3 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE3 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE3 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE3 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE3 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE3 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE3 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS
1390 1400 1410 1420 1430 1440
1450 1460
pF1KE3 CLDTSNDPDDLDVLRTRHARHTRKRRRLV
:::::::::::::::::::::::::::::
XP_006 CLDTSNDPDDLDVLRTRHARHTRKRRRLV
1450 1460
>>NP_003077 (OMIM: 602777) snRNA-activating protein comp (1469 aa)
initn: 9852 init1: 9852 opt: 9852 Z-score: 4366.3 bits: 820.5 E(85289): 0
Smith-Waterman score: 9852; 100.0% identity (100.0% similar) in 1469 aa overlap (1-1469:1-1469)
10 20 30 40 50 60
pF1KE3 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE3 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE3 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE3 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE3 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE3 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE3 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE3 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE3 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE3 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE3 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS
1390 1400 1410 1420 1430 1440
1450 1460
pF1KE3 CLDTSNDPDDLDVLRTRHARHTRKRRRLV
:::::::::::::::::::::::::::::
NP_003 CLDTSNDPDDLDVLRTRHARHTRKRRRLV
1450 1460
>>XP_006717307 (OMIM: 602777) PREDICTED: snRNA-activatin (873 aa)
initn: 5159 init1: 5159 opt: 5160 Z-score: 2298.7 bits: 437.2 E(85289): 2.7e-121
Smith-Waterman score: 5170; 88.7% identity (91.5% similar) in 893 aa overlap (584-1469:3-873)
560 570 580 590 600 610
pF1KE3 EGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSPPKGSSASQGGSKE
: : : :.: : :. . : : ..
XP_006 MERRGRG--LAGRPRCLPQPSQGVQCQPGRQQ
10 20 30
620 630 640 650 660
pF1KE3 AS---TTAAAPGEETS--PVQVPARAHGPVPRSAQASHSADTRPAGAEKQALEGGRRLLT
.: . .. :.:.. : : : : :. . . :.: ...: :: .
XP_006 GSFHHSRGSWRGDESGAGPCQGPR----PCPEVCPGLPLSRHSPGG-RREAGPGGWE---
40 50 60 70 80
670 680 690 700 710 720
pF1KE3 VPVETVLRVLRANTAARSCTQKEQLRQPPLPTSS--PGVSSGDSVARSHVQWLRHRATQS
.: .: .. . : : :::::::::::::::::::::::
XP_006 ------------ASADSACGDRAEGAQGQHGCSELHTGVSSGDSVARSHVQWLRHRATQS
90 100 110 120 130
730 740 750 760 770 780
pF1KE3 GQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQLQQARLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQLQQARLA
140 150 160 170 180 190
790 800 810 820 830 840
pF1KE3 STPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQSTPGHLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 STPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQSTPGHLF
200 210 220 230 240 250
850 860 870 880 890 900
pF1KE3 PNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEKRLQEAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEKRLQEAR
260 270 280 290 300 310
910 920 930 940 950 960
pF1KE3 AREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAAAKPGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAAAKPGTS
320 330 340 350 360 370
970 980 990 1000 1010 1020
pF1KE3 GSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPESGLGQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPESGLGQS
380 390 400 410 420 430
1030 1040 1050 1060 1070 1080
pF1KE3 QAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVLTAQGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVLTAQGLL
440 450 460 470 480 490
1090 1100 1110 1120 1130 1140
pF1KE3 PVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANMNREPEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANMNREPEP
500 510 520 530 540 550
1150 1160 1170 1180 1190 1200
pF1KE3 SCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEPPWSGRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEPPWSGRL
560 570 580 590 600 610
1210 1220 1230 1240 1250 1260
pF1KE3 PAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLPQPGPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLPQPGPEK
620 630 640 650 660 670
1270 1280 1290 1300 1310 1320
pF1KE3 GALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLHKKALEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLHKKALEH
680 690 700 710 720 730
1330 1340 1350 1360 1370 1380
pF1KE3 KATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLATLAPQGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLATLAPQGV
740 750 760 770 780 790
1390 1400 1410 1420 1430 1440
pF1KE3 RTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASSCLDTSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASSCLDTSN
800 810 820 830 840 850
1450 1460
pF1KE3 DPDDLDVLRTRHARHTRKRRRLV
:::::::::::::::::::::::
XP_006 DPDDLDVLRTRHARHTRKRRRLV
860 870
>>XP_016870547 (OMIM: 602777) PREDICTED: snRNA-activatin (1441 aa)
initn: 5097 init1: 5097 opt: 5109 Z-score: 2273.2 bits: 433.2 E(85289): 7e-120
Smith-Waterman score: 9600; 98.1% identity (98.1% similar) in 1469 aa overlap (1-1469:1-1441)
10 20 30 40 50 60
pF1KE3 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR
::::::::::::::::::::::::::::: :::
XP_016 EGGRRLLTVPVETVLRVLRANTAARSCTQ----------------------------WLR
670 680 690
730 740 750 760 770 780
pF1KE3 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL
700 710 720 730 740 750
790 800 810 820 830 840
pF1KE3 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS
760 770 780 790 800 810
850 860 870 880 890 900
pF1KE3 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK
820 830 840 850 860 870
910 920 930 940 950 960
pF1KE3 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA
880 890 900 910 920 930
970 980 990 1000 1010 1020
pF1KE3 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE
940 950 960 970 980 990
1030 1040 1050 1060 1070 1080
pF1KE3 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL
1000 1010 1020 1030 1040 1050
1090 1100 1110 1120 1130 1140
pF1KE3 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM
1060 1070 1080 1090 1100 1110
1150 1160 1170 1180 1190 1200
pF1KE3 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP
1120 1130 1140 1150 1160 1170
1210 1220 1230 1240 1250 1260
pF1KE3 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP
1180 1190 1200 1210 1220 1230
1270 1280 1290 1300 1310 1320
pF1KE3 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH
1240 1250 1260 1270 1280 1290
1330 1340 1350 1360 1370 1380
pF1KE3 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT
1300 1310 1320 1330 1340 1350
1390 1400 1410 1420 1430 1440
pF1KE3 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS
1360 1370 1380 1390 1400 1410
1450 1460
pF1KE3 CLDTSNDPDDLDVLRTRHARHTRKRRRLV
:::::::::::::::::::::::::::::
XP_016 CLDTSNDPDDLDVLRTRHARHTRKRRRLV
1420 1430 1440
1469 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 07:40:58 2016 done: Sun Nov 6 07:41:01 2016
Total Scan time: 21.820 Total Display time: 0.570
Function used was FASTA [36.3.4 Apr, 2011]