Result of FASTA (omim) for
pFN21AE3720
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3720, 2491 aa
1>>>pF1KE3720 2491 - 2491 aa - 2491 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9207+/-0.00047; mu= 28.4805+/- 0.029
mean_var=84.3500+/-16.745, 0's: 0 Z-trim(110.1): 72 B-trim: 0 in 0/55
Lambda= 0.139647
statistics sampled from 18303 (18374) to 18303 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.541), E-opt: 0.2 (0.215), width: 16
Scan time: 20.280
The best scores are: opt bits E(85289)
NP_000867 (OMIM: 114550,147280) cation-independent (2491) 17193 3476.0 0
NP_001289438 (OMIM: 120360,259600) 72 kDa type IV ( 584) 218 55.4 2.6e-06
NP_001289439 (OMIM: 120360,259600) 72 kDa type IV ( 584) 218 55.4 2.6e-06
NP_001289437 (OMIM: 120360,259600) 72 kDa type IV ( 584) 218 55.4 2.6e-06
NP_001121363 (OMIM: 120360,259600) 72 kDa type IV ( 610) 218 55.4 2.7e-06
NP_004521 (OMIM: 120360,259600) 72 kDa type IV col ( 660) 218 55.4 2.9e-06
NP_001284368 (OMIM: 604552) hepatocyte growth fact ( 662) 200 51.8 3.5e-05
NP_001231913 (OMIM: 602329) protein sel-1 homolog ( 301) 193 50.1 5.5e-05
XP_005268046 (OMIM: 602329) PREDICTED: protein sel ( 771) 193 50.5 0.0001
NP_005056 (OMIM: 602329) protein sel-1 homolog 1 i ( 794) 193 50.5 0.00011
XP_016859090 (OMIM: 604939) PREDICTED: secretory p ( 795) 193 50.5 0.00011
NP_001519 (OMIM: 604552) hepatocyte growth factor ( 655) 192 50.2 0.00011
NP_473375 (OMIM: 135600,601894,614101) fibronectin ( 657) 192 50.2 0.00011
NP_001007268 (OMIM: 604939) secretory phospholipas (1324) 193 50.7 0.00015
XP_016859088 (OMIM: 604939) PREDICTED: secretory p (1383) 193 50.7 0.00016
NP_001182570 (OMIM: 604939) secretory phospholipas (1461) 193 50.8 0.00016
NP_031392 (OMIM: 604939) secretory phospholipase A (1463) 193 50.8 0.00016
XP_005246449 (OMIM: 604939) PREDICTED: secretory p (1463) 193 50.8 0.00016
XP_016859087 (OMIM: 604939) PREDICTED: secretory p (1463) 193 50.8 0.00016
XP_011509122 (OMIM: 604939) PREDICTED: secretory p (1463) 193 50.8 0.00016
NP_004985 (OMIM: 120361,613073) matrix metalloprot ( 707) 189 49.6 0.00017
NP_997639 (OMIM: 135600,601894,614101) fibronectin (2176) 192 50.7 0.00025
NP_001293061 (OMIM: 135600,601894,614101) fibronec (2240) 192 50.8 0.00025
XP_005246473 (OMIM: 135600,601894,614101) PREDICTE (2246) 192 50.8 0.00025
NP_001293060 (OMIM: 135600,601894,614101) fibronec (2265) 192 50.8 0.00025
XP_005246471 (OMIM: 135600,601894,614101) PREDICTE (2266) 192 50.8 0.00025
NP_001293059 (OMIM: 135600,601894,614101) fibronec (2267) 192 50.8 0.00025
XP_005246469 (OMIM: 135600,601894,614101) PREDICTE (2271) 192 50.8 0.00025
XP_005246468 (OMIM: 135600,601894,614101) PREDICTE (2273) 192 50.8 0.00025
NP_997641 (OMIM: 135600,601894,614101) fibronectin (2296) 192 50.8 0.00025
XP_016859184 (OMIM: 135600,601894,614101) PREDICTE (2302) 192 50.8 0.00026
NP_997643 (OMIM: 135600,601894,614101) fibronectin (2330) 192 50.8 0.00026
XP_016859183 (OMIM: 135600,601894,614101) PREDICTE (2331) 192 50.8 0.00026
XP_005246467 (OMIM: 135600,601894,614101) PREDICTE (2337) 192 50.8 0.00026
NP_002017 (OMIM: 135600,601894,614101) fibronectin (2355) 192 50.8 0.00026
XP_016859182 (OMIM: 135600,601894,614101) PREDICTE (2356) 192 50.8 0.00026
XP_016859181 (OMIM: 135600,601894,614101) PREDICTE (2357) 192 50.8 0.00026
XP_005246466 (OMIM: 135600,601894,614101) PREDICTE (2361) 192 50.8 0.00026
XP_005246465 (OMIM: 135600,601894,614101) PREDICTE (2362) 192 50.8 0.00026
XP_005246464 (OMIM: 135600,601894,614101) PREDICTE (2363) 192 50.8 0.00026
XP_005246463 (OMIM: 135600,601894,614101) PREDICTE (2386) 192 50.8 0.00026
XP_005246462 (OMIM: 135600,601894,614101) PREDICTE (2387) 192 50.8 0.00026
XP_005246461 (OMIM: 135600,601894,614101) PREDICTE (2392) 192 50.8 0.00026
XP_005246460 (OMIM: 135600,601894,614101) PREDICTE (2393) 192 50.8 0.00026
XP_005246459 (OMIM: 135600,601894,614101) PREDICTE (2421) 192 50.8 0.00026
XP_005246458 (OMIM: 135600,601894,614101) PREDICTE (2427) 192 50.8 0.00026
NP_001293058 (OMIM: 135600,601894,614101) fibronec (2446) 192 50.8 0.00027
XP_005246456 (OMIM: 135600,601894,614101) PREDICTE (2452) 192 50.8 0.00027
XP_005246455 (OMIM: 135600,601894,614101) PREDICTE (2458) 192 50.8 0.00027
NP_997647 (OMIM: 135600,601894,614101) fibronectin (2477) 192 50.8 0.00027
>>NP_000867 (OMIM: 114550,147280) cation-independent man (2491 aa)
initn: 17193 init1: 17193 opt: 17193 Z-score: 18709.2 bits: 3476.0 E(85289): 0
Smith-Waterman score: 17193; 100.0% identity (100.0% similar) in 2491 aa overlap (1-2491:1-2491)
10 20 30 40 50 60
pF1KE3 MGAAAGRSPHLGPAPARRPQRSLLLLQLLLLVAAPGSTQAQAAPFPELCSYTWEAVDTKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MGAAAGRSPHLGPAPARRPQRSLLLLQLLLLVAAPGSTQAQAAPFPELCSYTWEAVDTKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 NVLYKINICGSVDIVQCGPSSAVCMHDLKTRTYHSVGDSVLRSATRSLLEFNTTVSCDQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NVLYKINICGSVDIVQCGPSSAVCMHDLKTRTYHSVGDSVLRSATRSLLEFNTTVSCDQQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 GTNHRVQSSIAFLCGKTLGTPEFVTATECVHYFEWRTTAACKKDIFKANKEVPCYVFDEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GTNHRVQSSIAFLCGKTLGTPEFVTATECVHYFEWRTTAACKKDIFKANKEVPCYVFDEE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LRKHDLNPLIKLSGAYLVDDSDPDTSLFINVCRDIDTLRDPGSQLRACPPGTAACLVRGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LRKHDLNPLIKLSGAYLVDDSDPDTSLFINVCRDIDTLRDPGSQLRACPPGTAACLVRGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 QAFDVGQPRDGLKLVRKDRLVLSYVREEAGKLDFCDGHSPAVTITFVCPSERREGTIPKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 QAFDVGQPRDGLKLVRKDRLVLSYVREEAGKLDFCDGHSPAVTITFVCPSERREGTIPKL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 TAKSNCRYEIEWITEYACHRDYLESKTCSLSGEQQDVSIDLTPLAQSGGSSYISDGKEYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TAKSNCRYEIEWITEYACHRDYLESKTCSLSGEQQDVSIDLTPLAQSGGSSYISDGKEYL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 FYLNVCGETEIQFCNKKQAAVCQVKKSDTSQVKAAGRYHNQTLRYSDGDLTLIYFGGDEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FYLNVCGETEIQFCNKKQAAVCQVKKSDTSQVKAAGRYHNQTLRYSDGDLTLIYFGGDEC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 SSGFQRMSVINFECNKTAGNDGKGTPVFTGEVDCTYFFTWDTEYACVKEKEDLLCGATDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SSGFQRMSVINFECNKTAGNDGKGTPVFTGEVDCTYFFTWDTEYACVKEKEDLLCGATDG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 KKRYDLSALVRHAEPEQNWEAVDGSQTETEKKHFFINICHRVLQEGKARGCPEDAAVCAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KKRYDLSALVRHAEPEQNWEAVDGSQTETEKKHFFINICHRVLQEGKARGCPEDAAVCAV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 DKNGSKNLGKFISSPMKEKGNIQLSYSDGDDCGHGKKIKTNITLVCKPGDLESAPVLRTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DKNGSKNLGKFISSPMKEKGNIQLSYSDGDDCGHGKKIKTNITLVCKPGDLESAPVLRTS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 GEGGCFYEFEWHTAAACVLSKTEGENCTVFDSQAGFSFDLSPLTKKNGAYKVETKKYDFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GEGGCFYEFEWHTAAACVLSKTEGENCTVFDSQAGFSFDLSPLTKKNGAYKVETKKYDFY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 INVCGPVSVSPCQPDSGACQVAKSDEKTWNLGLSNAKLSYYDGMIQLNYRGGTPYNNERH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 INVCGPVSVSPCQPDSGACQVAKSDEKTWNLGLSNAKLSYYDGMIQLNYRGGTPYNNERH
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 TPRATLITFLCDRDAGVGFPEYQEEDNSTYNFRWYTSYACPEEPLECVVTDPSTLEQYDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TPRATLITFLCDRDAGVGFPEYQEEDNSTYNFRWYTSYACPEEPLECVVTDPSTLEQYDL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 SSLAKSEGGLGGNWYAMDNSGEHVTWRKYYINVCRPLNPVPGCNRYASACQMKYEKDQGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SSLAKSEGGLGGNWYAMDNSGEHVTWRKYYINVCRPLNPVPGCNRYASACQMKYEKDQGS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE3 FTEVVSISNLGMAKTGPVVEDSGSLLLEYVNGSACTTSDGRQTTYTTRIHLVCSRGRLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FTEVVSISNLGMAKTGPVVEDSGSLLLEYVNGSACTTSDGRQTTYTTRIHLVCSRGRLNS
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE3 HPIFSLNWECVVSFLWNTEAACPIQTTTDTDQACSIRDPNSGFVFNLNPLNSSQGYNVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 HPIFSLNWECVVSFLWNTEAACPIQTTTDTDQACSIRDPNSGFVFNLNPLNSSQGYNVSG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE3 IGKIFMFNVCGTMPVCGTILGKPASGCEAETQTEELKNWKPARPVGIEKSLQLSTEGFIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 IGKIFMFNVCGTMPVCGTILGKPASGCEAETQTEELKNWKPARPVGIEKSLQLSTEGFIT
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE3 LTYKGPLSAKGTADAFIVRFVCNDDVYSGPLKFLHQDIDSGQGIRNTYFEFETALACVPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LTYKGPLSAKGTADAFIVRFVCNDDVYSGPLKFLHQDIDSGQGIRNTYFEFETALACVPS
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE3 PVDCQVTDLAGNEYDLTGLSTVRKPWTAVDTSVDGRKRTFYLSVCNPLPYIPGCQGSAVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PVDCQVTDLAGNEYDLTGLSTVRKPWTAVDTSVDGRKRTFYLSVCNPLPYIPGCQGSAVG
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE3 SCLVSEGNSWNLGVVQMSPQAAANGSLSIMYVNGDKCGNQRFSTRITFECAQISGSPAFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SCLVSEGNSWNLGVVQMSPQAAANGSLSIMYVNGDKCGNQRFSTRITFECAQISGSPAFQ
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE3 LQDGCEYVFIWRTVEACPVVRVEGDNCEVKDPRHGNLYDLKPLGLNDTIVSAGEYTYYFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LQDGCEYVFIWRTVEACPVVRVEGDNCEVKDPRHGNLYDLKPLGLNDTIVSAGEYTYYFR
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE3 VCGKLSSDVCPTSDKSKVVSSCQEKREPQGFHKVAGLLTQKLTYENGLLKMNFTGGDTCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VCGKLSSDVCPTSDKSKVVSSCQEKREPQGFHKVAGLLTQKLTYENGLLKMNFTGGDTCH
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE3 KVYQRSTAIFFYCDRGTQRPVFLKETSDCSYLFEWRTQYACPPFDLTECSFKDGAGNSFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KVYQRSTAIFFYCDRGTQRPVFLKETSDCSYLFEWRTQYACPPFDLTECSFKDGAGNSFD
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE3 LSSLSRYSDNWEAITGTGDPEHYLINVCKSLAPQAGTEPCPPEAAACLLGGSKPVNLGRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LSSLSRYSDNWEAITGTGDPEHYLINVCKSLAPQAGTEPCPPEAAACLLGGSKPVNLGRV
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KE3 RDGPQWRDGIIVLKYVDGDLCPDGIRKKSTTIRFTCSESQVNSRPMFISAVEDCEYTFAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RDGPQWRDGIIVLKYVDGDLCPDGIRKKSTTIRFTCSESQVNSRPMFISAVEDCEYTFAW
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KE3 PTATACPMKSNEHDDCQVTNPSTGHLFDLSSLSGRAGFTAAYSEKGLVYMSICGENENCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PTATACPMKSNEHDDCQVTNPSTGHLFDLSSLSGRAGFTAAYSEKGLVYMSICGENENCP
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KE3 PGVGACFGQTRISVGKANKRLRYVDQVLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PGVGACFGQTRISVGKANKRLRYVDQVLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGP
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KE3 TNRPMLISLDKQTCTLFFSWHTPLACEQATECSVRNGSSIVDLSPLIHRTGGYEAYDESE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TNRPMLISLDKQTCTLFFSWHTPLACEQATECSVRNGSSIVDLSPLIHRTGGYEAYDESE
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KE3 DDASDTNPDFYINICQPLNPMHGVPCPAGAAVCKVPIDGPPIDIGRVAGPPILNPIANEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DDASDTNPDFYINICQPLNPMHGVPCPAGAAVCKVPIDGPPIDIGRVAGPPILNPIANEI
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KE3 YLNFESSTPCLADKHFNYTSLIAFHCKRGVSMGTPKLLRTSECDFVFEWETPVVCPDEVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 YLNFESSTPCLADKHFNYTSLIAFHCKRGVSMGTPKLLRTSECDFVFEWETPVVCPDEVR
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KE3 MDGCTLTDEQLLYSFNLSSLSTSTFKVTRDSRTYSVGVCTFAVGPEQGGCKDGGVCLLSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MDGCTLTDEQLLYSFNLSSLSTSTFKVTRDSRTYSVGVCTFAVGPEQGGCKDGGVCLLSG
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KE3 TKGASFGRLQSMKLDYRHQDEAVVLSYVNGDRCPPETDDGVPCVFPFIFNGKSYEECIIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TKGASFGRLQSMKLDYRHQDEAVVLSYVNGDRCPPETDDGVPCVFPFIFNGKSYEECIIE
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KE3 SRAKLWCSTTADYDRDHEWGFCRHSNSYRTSSIIFKCDEDEDIGRPQVFSEVRGCDVTFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SRAKLWCSTTADYDRDHEWGFCRHSNSYRTSSIIFKCDEDEDIGRPQVFSEVRGCDVTFE
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KE3 WKTKVVCPPKKLECKFVQKHKTYDLRLLSSLTGSWSLVHNGVSYYINLCQKIYKGPLGCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 WKTKVVCPPKKLECKFVQKHKTYDLRLLSSLTGSWSLVHNGVSYYINLCQKIYKGPLGCS
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090 2100
pF1KE3 ERASICRRTTTGDVQVLGLVHTQKLGVIGDKVVVTYSKGYPCGGNKTASSVIELTCTKTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 ERASICRRTTTGDVQVLGLVHTQKLGVIGDKVVVTYSKGYPCGGNKTASSVIELTCTKTV
2050 2060 2070 2080 2090 2100
2110 2120 2130 2140 2150 2160
pF1KE3 GRPAFKRFDIDSCTYYFSWDSRAACAVKPQEVQMVNGTITNPINGKSFSLGDIYFKLFRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GRPAFKRFDIDSCTYYFSWDSRAACAVKPQEVQMVNGTITNPINGKSFSLGDIYFKLFRA
2110 2120 2130 2140 2150 2160
2170 2180 2190 2200 2210 2220
pF1KE3 SGDMRTNGDNYLYEIQLSSITSSRNPACSGANICQVKPNDQHFSRKVGTSDKTKYYLQDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SGDMRTNGDNYLYEIQLSSITSSRNPACSGANICQVKPNDQHFSRKVGTSDKTKYYLQDG
2170 2180 2190 2200 2210 2220
2230 2240 2250 2260 2270 2280
pF1KE3 DLDVVFASSSKCGKDKTKSVSSTIFFHCDPLVEDGIPEFSHETADCQYLFSWYTSAVCPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DLDVVFASSSKCGKDKTKSVSSTIFFHCDPLVEDGIPEFSHETADCQYLFSWYTSAVCPL
2230 2240 2250 2260 2270 2280
2290 2300 2310 2320 2330 2340
pF1KE3 GVGFDSENPGDDGQMHKGLSERSQAVGAVLSLLLVALTCCLLALLLYKKERRETVISKLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GVGFDSENPGDDGQMHKGLSERSQAVGAVLSLLLVALTCCLLALLLYKKERRETVISKLT
2290 2300 2310 2320 2330 2340
2350 2360 2370 2380 2390 2400
pF1KE3 TCCRRSSNVSYKYSKVNKEEETDENETEWLMEEIQLPPPRQGKEGQENGHITTKSVKALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TCCRRSSNVSYKYSKVNKEEETDENETEWLMEEIQLPPPRQGKEGQENGHITTKSVKALS
2350 2360 2370 2380 2390 2400
2410 2420 2430 2440 2450 2460
pF1KE3 SLHGDDQDSEDEVLTIPEVKVHSGRGAGAESSHPVRNAQSNALQEREDDRVGLVRGEKAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SLHGDDQDSEDEVLTIPEVKVHSGRGAGAESSHPVRNAQSNALQEREDDRVGLVRGEKAR
2410 2420 2430 2440 2450 2460
2470 2480 2490
pF1KE3 KGKSSSAQQKTVSSTKLVSFHDDSDEDLLHI
:::::::::::::::::::::::::::::::
NP_000 KGKSSSAQQKTVSSTKLVSFHDDSDEDLLHI
2470 2480 2490
>>NP_001289438 (OMIM: 120360,259600) 72 kDa type IV coll (584 aa)
initn: 365 init1: 125 opt: 218 Z-score: 234.2 bits: 55.4 E(85289): 2.6e-06
Smith-Waterman score: 224; 28.8% identity (53.1% similar) in 177 aa overlap (1785-1942:161-314)
1760 1770 1780 1790 1800 1810
pF1KE3 HFNYTSLIAFHCKRGVSMGTPKLLRTSECDFVFEWETPVVCPDEVRMDGCTLTDEQLLYS
:.:. . : : : :: .:.
NP_001 FDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDG-------FLWC
140 150 160 170 180
1820 1830 1840 1850 1860
pF1KE3 FNLSSLSTSTFKVTRDSRTYSVGVCTFAVGPEQGGCKDGGVCLLSGT-KGASF------G
..:.. .:.. : : . .:: .: : . .:.:. :
NP_001 -------STTYNFEKDGK---YGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEG
190 200 210 220 230
1870 1880 1890 1900 1910
pF1KE3 RLQSMKL-----DYRHQDE-----AVVLSYVNGDRCPPETDDGVPCVFPFIFNGKSYEEC
: .... :: .. . ...: :.:. ..:.:::::: : :..:: :
NP_001 RTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGN------SEGAPCVFPFTFLGNKYESC
240 250 260 270 280
1920 1930 1940 1950 1960 1970
pF1KE3 IIESRA--KLWCSTTADYDRDHEWGFCRHSNSYRTSSIIFKCDEDEDIGRPQVFSEVRGC
.:. :.::.:::.:: :..::::
NP_001 TSAGRSDGKMWCATTANYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAP
290 300 310 320 330 340
>>NP_001289439 (OMIM: 120360,259600) 72 kDa type IV coll (584 aa)
initn: 365 init1: 125 opt: 218 Z-score: 234.2 bits: 55.4 E(85289): 2.6e-06
Smith-Waterman score: 224; 28.8% identity (53.1% similar) in 177 aa overlap (1785-1942:161-314)
1760 1770 1780 1790 1800 1810
pF1KE3 HFNYTSLIAFHCKRGVSMGTPKLLRTSECDFVFEWETPVVCPDEVRMDGCTLTDEQLLYS
:.:. . : : : :: .:.
NP_001 FDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDG-------FLWC
140 150 160 170 180
1820 1830 1840 1850 1860
pF1KE3 FNLSSLSTSTFKVTRDSRTYSVGVCTFAVGPEQGGCKDGGVCLLSGT-KGASF------G
..:.. .:.. : : . .:: .: : . .:.:. :
NP_001 -------STTYNFEKDGK---YGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEG
190 200 210 220 230
1870 1880 1890 1900 1910
pF1KE3 RLQSMKL-----DYRHQDE-----AVVLSYVNGDRCPPETDDGVPCVFPFIFNGKSYEEC
: .... :: .. . ...: :.:. ..:.:::::: : :..:: :
NP_001 RTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGN------SEGAPCVFPFTFLGNKYESC
240 250 260 270 280
1920 1930 1940 1950 1960 1970
pF1KE3 IIESRA--KLWCSTTADYDRDHEWGFCRHSNSYRTSSIIFKCDEDEDIGRPQVFSEVRGC
.:. :.::.:::.:: :..::::
NP_001 TSAGRSDGKMWCATTANYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAP
290 300 310 320 330 340
>>NP_001289437 (OMIM: 120360,259600) 72 kDa type IV coll (584 aa)
initn: 365 init1: 125 opt: 218 Z-score: 234.2 bits: 55.4 E(85289): 2.6e-06
Smith-Waterman score: 224; 28.8% identity (53.1% similar) in 177 aa overlap (1785-1942:161-314)
1760 1770 1780 1790 1800 1810
pF1KE3 HFNYTSLIAFHCKRGVSMGTPKLLRTSECDFVFEWETPVVCPDEVRMDGCTLTDEQLLYS
:.:. . : : : :: .:.
NP_001 FDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDG-------FLWC
140 150 160 170 180
1820 1830 1840 1850 1860
pF1KE3 FNLSSLSTSTFKVTRDSRTYSVGVCTFAVGPEQGGCKDGGVCLLSGT-KGASF------G
..:.. .:.. : : . .:: .: : . .:.:. :
NP_001 -------STTYNFEKDGK---YGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEG
190 200 210 220 230
1870 1880 1890 1900 1910
pF1KE3 RLQSMKL-----DYRHQDE-----AVVLSYVNGDRCPPETDDGVPCVFPFIFNGKSYEEC
: .... :: .. . ...: :.:. ..:.:::::: : :..:: :
NP_001 RTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGN------SEGAPCVFPFTFLGNKYESC
240 250 260 270 280
1920 1930 1940 1950 1960 1970
pF1KE3 IIESRA--KLWCSTTADYDRDHEWGFCRHSNSYRTSSIIFKCDEDEDIGRPQVFSEVRGC
.:. :.::.:::.:: :..::::
NP_001 TSAGRSDGKMWCATTANYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAP
290 300 310 320 330 340
>>NP_001121363 (OMIM: 120360,259600) 72 kDa type IV coll (610 aa)
initn: 365 init1: 125 opt: 218 Z-score: 234.0 bits: 55.4 E(85289): 2.7e-06
Smith-Waterman score: 224; 28.8% identity (53.1% similar) in 177 aa overlap (1785-1942:187-340)
1760 1770 1780 1790 1800 1810
pF1KE3 HFNYTSLIAFHCKRGVSMGTPKLLRTSECDFVFEWETPVVCPDEVRMDGCTLTDEQLLYS
:.:. . : : : :: .:.
NP_001 FDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDG-------FLWC
160 170 180 190 200
1820 1830 1840 1850 1860
pF1KE3 FNLSSLSTSTFKVTRDSRTYSVGVCTFAVGPEQGGCKDGGVCLLSGT-KGASF------G
..:.. .:.. : : . .:: .: : . .:.:. :
NP_001 -------STTYNFEKDGK---YGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEG
210 220 230 240 250
1870 1880 1890 1900 1910
pF1KE3 RLQSMKL-----DYRHQDE-----AVVLSYVNGDRCPPETDDGVPCVFPFIFNGKSYEEC
: .... :: .. . ...: :.:. ..:.:::::: : :..:: :
NP_001 RTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGN------SEGAPCVFPFTFLGNKYESC
260 270 280 290 300 310
1920 1930 1940 1950 1960 1970
pF1KE3 IIESRA--KLWCSTTADYDRDHEWGFCRHSNSYRTSSIIFKCDEDEDIGRPQVFSEVRGC
.:. :.::.:::.:: :..::::
NP_001 TSAGRSDGKMWCATTANYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAP
320 330 340 350 360 370
>>NP_004521 (OMIM: 120360,259600) 72 kDa type IV collage (660 aa)
initn: 365 init1: 125 opt: 218 Z-score: 233.5 bits: 55.4 E(85289): 2.9e-06
Smith-Waterman score: 224; 28.8% identity (53.1% similar) in 177 aa overlap (1785-1942:237-390)
1760 1770 1780 1790 1800 1810
pF1KE3 HFNYTSLIAFHCKRGVSMGTPKLLRTSECDFVFEWETPVVCPDEVRMDGCTLTDEQLLYS
:.:. . : : : :: .:.
NP_004 FDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDG-------FLWC
210 220 230 240 250
1820 1830 1840 1850 1860
pF1KE3 FNLSSLSTSTFKVTRDSRTYSVGVCTFAVGPEQGGCKDGGVCLLSGT-KGASF------G
..:.. .:.. : : . .:: .: : . .:.:. :
NP_004 -------STTYNFEKDGK---YGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEG
260 270 280 290 300
1870 1880 1890 1900 1910
pF1KE3 RLQSMKL-----DYRHQDE-----AVVLSYVNGDRCPPETDDGVPCVFPFIFNGKSYEEC
: .... :: .. . ...: :.:. ..:.:::::: : :..:: :
NP_004 RTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGN------SEGAPCVFPFTFLGNKYESC
310 320 330 340 350 360
1920 1930 1940 1950 1960 1970
pF1KE3 IIESRA--KLWCSTTADYDRDHEWGFCRHSNSYRTSSIIFKCDEDEDIGRPQVFSEVRGC
.:. :.::.:::.:: :..::::
NP_004 TSAGRSDGKMWCATTANYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAP
370 380 390 400 410 420
>>NP_001284368 (OMIM: 604552) hepatocyte growth factor a (662 aa)
initn: 212 init1: 109 opt: 200 Z-score: 213.9 bits: 51.8 E(85289): 3.5e-05
Smith-Waterman score: 200; 20.9% identity (48.8% similar) in 406 aa overlap (1897-2282:102-486)
1870 1880 1890 1900 1910 1920
pF1KE3 GRLQSMKLDYRHQDEAVVLSYVNGDRCPPETDDGVPCVFPFIFNGKSYEECIIESRA-KL
:.:: :: ::: ..:. . : :. : .
NP_001 APEAEGPQSGGLPPPPRAVPSSSSPQAQALTEDGRPCRFPFRYGGRMLHACTSEGSAHRK
80 90 100 110 120 130
1930 1940 1950 1960 1970 1980
pF1KE3 WCSTTADYDRDHEWGFCRHSNSYRTSSIIFKCDEDEDIGRPQVFSEVRGCDVTFEWKTKV
::.:: .::::. ::.: ... . . : . : . . .:. : . ..
NP_001 WCATTHNYDRDRAWGYCVEATPPPGGPAAL----DPCASGPCLNGG--SCSNTQDPQSYH
140 150 160 170 180
1990 2000 2010 2020 2030 2040
pF1KE3 VCPPKKLECKFVQKHKTYDLRLLSSLTGS--WSLVHNGVSYYINLCQKIYKGPLGC-SER
:. . : .: .: : :. :. :..: ... :. . : : . :
NP_001 CSCPRAFTGKDCGTEKCFDETRYEYLEGGDRWARVRQG---HVEQCE-CFGGRTWCEGTR
190 200 210 220 230 240
2050 2060 2070 2080 2090
pF1KE3 ASICRRTTT---GDVQVLGLVHTQKL----GVIGDKVVVTYSK----GYPCGGNKTAS-S
. : . : ... . : : : . .. : : .:: :
NP_001 HTACLSSPCLNGGTCHLIVATGTTVCACPPGFAGRLCNIEPDERCFLGNGTGYRGVASTS
250 260 270 280 290 300
2100 2110 2120 2130 2140
pF1KE3 VIELTCTKTVGRPAFKRFDIDSC--TYYFSWDSRAACAVKPQEVQMVNGTITNPINGKSF
. :.: . .... .:: . .. .: : .:.. . .. :.
NP_001 ASGLSCLAWNSDLLYQELHVDSVGAAALLGLGPHAYCR-NPDNDERPWCYVV-----KDS
310 320 330 340 350
2150 2160 2170 2180 2190 2200
pF1KE3 SLGDIYFKLFRASGDMRTNGDNYLYEIQLSS--ITSSRNPACSGANICQVKPNDQHFSRK
.:. : .: . :..:.: . : ..::: ... .:: : . : . . . : :
NP_001 ALSWEYCRL--EACDLETEGRESLTRVQLSPDLLATLPEPASPGRQACGRRHKKRTFLRP
360 370 380 390 400 410
2210 2220 2230 2240 2250 2260
pF1KE3 VGTSDKTKYYLQDGDLDVVFASSSKCGKDKTKSVSSTIFFHCDPLVEDGIPEFSHETADC
. ... . : ... ..: :. . ... . :: . :. : ..
NP_001 RIIGGSSSLPGSHPWLAAIYIGDSFCAGSLVHTCWVVSAAHC---FSHSPPRDSVSVVLG
420 430 440 450 460 470
2270 2280 2290 2300 2310 2320
pF1KE3 QYLFSWYTSAVCPLGVGFDSENPGDDGQMHKGLSERSQAVGAVLSLLLVALTCCLLALLL
:..:. :... .:.
NP_001 QHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLP
480 490 500 510 520 530
>>NP_001231913 (OMIM: 602329) protein sel-1 homolog 1 is (301 aa)
initn: 193 init1: 111 opt: 193 Z-score: 210.5 bits: 50.1 E(85289): 5.5e-05
Smith-Waterman score: 193; 52.1% identity (70.8% similar) in 48 aa overlap (1897-1942:121-168)
1870 1880 1890 1900 1910 1920
pF1KE3 GRLQSMKLDYRHQDEAVVLSYVNGDRCPPETDDGVPCVFPFIFNGKSYEECIIESR--AK
: : :: :::.: : :.:: ..: ..
NP_001 ISFLESPNPENKDYEEPKKVRKPALTAIEGTAHGEPCHFPFLFLDKEYDECTSDGREDGR
100 110 120 130 140 150
1930 1940 1950 1960 1970 1980
pF1KE3 LWCSTTADYDRDHEWGFCRHSNSYRTSSIIFKCDEDEDIGRPQVFSEVRGCDVTFEWKTK
:::.:: :: :..::::
NP_001 LWCATTYDYKADEKWGFCETEEEAAKRRQMQEAEMMYQTGMKILNGSNKKSQKREAYRYL
160 170 180 190 200 210
>>XP_005268046 (OMIM: 602329) PREDICTED: protein sel-1 h (771 aa)
initn: 193 init1: 111 opt: 193 Z-score: 205.5 bits: 50.5 E(85289): 0.0001
Smith-Waterman score: 193; 52.1% identity (70.8% similar) in 48 aa overlap (1897-1942:121-168)
1870 1880 1890 1900 1910 1920
pF1KE3 GRLQSMKLDYRHQDEAVVLSYVNGDRCPPETDDGVPCVFPFIFNGKSYEECIIESR--AK
: : :: :::.: : :.:: ..: ..
XP_005 ISFLESPNPENKDYEEPKKVRKPALTAIEGTAHGEPCHFPFLFLDKEYDECTSDGREDGR
100 110 120 130 140 150
1930 1940 1950 1960 1970 1980
pF1KE3 LWCSTTADYDRDHEWGFCRHSNSYRTSSIIFKCDEDEDIGRPQVFSEVRGCDVTFEWKTK
:::.:: :: :..::::
XP_005 LWCATTYDYKADEKWGFCETEEEAAKRRQMQEAEMMYQTGMKILNGSNKKSQKREAYRYL
160 170 180 190 200 210
>>NP_005056 (OMIM: 602329) protein sel-1 homolog 1 isofo (794 aa)
initn: 193 init1: 111 opt: 193 Z-score: 205.3 bits: 50.5 E(85289): 0.00011
Smith-Waterman score: 193; 52.1% identity (70.8% similar) in 48 aa overlap (1897-1942:121-168)
1870 1880 1890 1900 1910 1920
pF1KE3 GRLQSMKLDYRHQDEAVVLSYVNGDRCPPETDDGVPCVFPFIFNGKSYEECIIESR--AK
: : :: :::.: : :.:: ..: ..
NP_005 ISFLESPNPENKDYEEPKKVRKPALTAIEGTAHGEPCHFPFLFLDKEYDECTSDGREDGR
100 110 120 130 140 150
1930 1940 1950 1960 1970 1980
pF1KE3 LWCSTTADYDRDHEWGFCRHSNSYRTSSIIFKCDEDEDIGRPQVFSEVRGCDVTFEWKTK
:::.:: :: :..::::
NP_005 LWCATTYDYKADEKWGFCETEEEAAKRRQMQEAEMMYQTGMKILNGSNKKSQKREAYRYL
160 170 180 190 200 210
2491 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 19:37:04 2016 done: Sun Nov 6 19:37:07 2016
Total Scan time: 20.280 Total Display time: 0.480
Function used was FASTA [36.3.4 Apr, 2011]