Result of FASTA (ccds) for
pFN21AE3713
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3713, 2025 aa
1>>>pF1KE3713 2025 - 2025 aa - 2025 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.0813+/-0.00119; mu= 4.5299+/- 0.072
mean_var=284.0402+/-58.379, 0's: 0 Z-trim(110.2): 30 B-trim: 101 in 1/52
Lambda= 0.076100
statistics sampled from 11432 (11451) to 11432 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.352), width: 16
Scan time: 4.390
The best scores are: opt bits E(32554)
CCDS13651.1 TTC3 gene_id:7267|Hs108|chr21 (2025) 13556 1503.7 0
>>CCDS13651.1 TTC3 gene_id:7267|Hs108|chr21 (2025 aa)
initn: 13556 init1: 13556 opt: 13556 Z-score: 8053.4 bits: 1503.7 E(32554): 0
Smith-Waterman score: 13556; 100.0% identity (100.0% similar) in 2025 aa overlap (1-2025:1-2025)
10 20 30 40 50 60
pF1KE3 MDNFAEGDFTVADYALLEDCPHVDDCVFAAEFMSNDYVRVTQLYCDGVGVQYKDYIQSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDNFAEGDFTVADYALLEDCPHVDDCVFAAEFMSNDYVRVTQLYCDGVGVQYKDYIQSER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 NLEFDICSIWCSKPISVLQDYCDAIKINIFWPLLFQHQNSSVISRLHPCVDANNSRASEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NLEFDICSIWCSKPISVLQDYCDAIKINIFWPLLFQHQNSSVISRLHPCVDANNSRASEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 NLKKLQHLELMEDIVDLAKKVANDSFLIGGLLRIGCKIENKILAMEEALNWIKYAGDVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NLKKLQHLELMEDIVDLAKKVANDSFLIGGLLRIGCKIENKILAMEEALNWIKYAGDVTI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LTKLGSIDNCWPMLSIFFTEYKYHITKIVMEDCNLLEELKTQSCMDCIEEGELMKMKGNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LTKLGSIDNCWPMLSIFFTEYKYHITKIVMEDCNLLEELKTQSCMDCIEEGELMKMKGNE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EFSKERFDIAIIYYTRAIEYRPENYLLYGNRALCFLRTGQFRNALGDGKRATILKNTWPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EFSKERFDIAIIYYTRAIEYRPENYLLYGNRALCFLRTGQFRNALGDGKRATILKNTWPK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 GHYRYCDALSMLGEYDWALQANIKAQKLCKNDPEGIKDLIQQHVKLQKQIEDLQGRTANK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GHYRYCDALSMLGEYDWALQANIKAQKLCKNDPEGIKDLIQQHVKLQKQIEDLQGRTANK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 DPIKAFYENRAYTPRSLSAPIFTTSLNFVEKERDFRKINHEMANGGNQNLKVADEALKVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DPIKAFYENRAYTPRSLSAPIFTTSLNFVEKERDFRKINHEMANGGNQNLKVADEALKVD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 DCDCHPEFSPPSSQPPKHKGKQKSRNNESEKFSSSSPLTLPADLKNILEKQFSKSSRAAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DCDCHPEFSPPSSQPPKHKGKQKSRNNESEKFSSSSPLTLPADLKNILEKQFSKSSRAAH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 QDFANIMKMLRSLIQDGYMALLEQRCRSAAQAFTELLNGLDPQKIKQLNLAMINYVLVVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QDFANIMKMLRSLIQDGYMALLEQRCRSAAQAFTELLNGLDPQKIKQLNLAMINYVLVVY
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 GLAISLLGIGQPEELSEAENQFKRIIEHYPSEGLDCLAYCGIGKVYLKKNRFLEALNHFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GLAISLLGIGQPEELSEAENQFKRIIEHYPSEGLDCLAYCGIGKVYLKKNRFLEALNHFE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 KARTLIYRLPGVLTWPTSNVIIEESQPQKIKMLLEKFVEECKFPPVPDAICCYQKCHGYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KARTLIYRLPGVLTWPTSNVIIEESQPQKIKMLLEKFVEECKFPPVPDAICCYQKCHGYS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 KIQIYITDPDFKGFIRISCCQYCKIEFHMNCWKKLKTTTFNDKIDKDFLQGICLTPDCEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KIQIYITDPDFKGFIRISCCQYCKIEFHMNCWKKLKTTTFNDKIDKDFLQGICLTPDCEG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 VISKIIIFSSGGEVKCEFEHKVIKEKVPPRPILKQKCSSLEKLRLKEDKKLKRKIQKKEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VISKIIIFSSGGEVKCEFEHKVIKEKVPPRPILKQKCSSLEKLRLKEDKKLKRKIQKKEA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 KKLAQERMEEDLRESNPPKNEEQKETVDNVQRCQFLDDRILQCIKQYADKIKSGIQNTAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KKLAQERMEEDLRESNPPKNEEQKETVDNVQRCQFLDDRILQCIKQYADKIKSGIQNTAM
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE3 LLKELLSWKVLSTEDYTTCFSSRNFLNEAVDYVIRHLIQENNRVKTRIFLHVLSELKEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LLKELLSWKVLSTEDYTTCFSSRNFLNEAVDYVIRHLIQENNRVKTRIFLHVLSELKEVE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE3 PKLAAWIQKLNSFGLDATGTFFSRYGASLKLLDFSIMTFLWNEKYGHKLDSIEGKQLDYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PKLAAWIQKLNSFGLDATGTFFSRYGASLKLLDFSIMTFLWNEKYGHKLDSIEGKQLDYF
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE3 SEPASLKEARCLIWLLEEHRDKFPALHSALDEFFDIMDSRCTVLRKQDSGEAPFSSTKVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SEPASLKEARCLIWLLEEHRDKFPALHSALDEFFDIMDSRCTVLRKQDSGEAPFSSTKVK
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE3 NKSKKKKPKDSKPMLVGSGTTSVTSNNEIITSSEDHSNRNSDSAGPFAVPDHLRQDVEEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NKSKKKKPKDSKPMLVGSGTTSVTSNNEIITSSEDHSNRNSDSAGPFAVPDHLRQDVEEF
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE3 EALYDQHSNEYVVRNKKLWDMNPKQKCSTLYDYFSQFLEEHGPLDMSNKMFSAEYEFFPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EALYDQHSNEYVVRNKKLWDMNPKQKCSTLYDYFSQFLEEHGPLDMSNKMFSAEYEFFPE
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE3 ETRQILEKAGGLKPFLLGCPRFVVIDNCIALKKVASRLKKKRKKKNIKTKVEEISKAGEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ETRQILEKAGGLKPFLLGCPRFVVIDNCIALKKVASRLKKKRKKKNIKTKVEEISKAGEY
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE3 VRVKLQLNPAAREFKPDVKSKPVSDSSSAPAFENVKPKPVSANSPKPACEDVKAKPVSDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VRVKLQLNPAAREFKPDVKSKPVSDSSSAPAFENVKPKPVSANSPKPACEDVKAKPVSDN
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE3 SSRQVSEDGQPKGVSSNSPKPGSEDANYKRVSCNSPKPVLEDVKPTYWAQSHLVTGYCTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SSRQVSEDGQPKGVSSNSPKPGSEDANYKRVSCNSPKPVLEDVKPTYWAQSHLVTGYCTY
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE3 LPFQRFDITQTPPAYINVLPGLPQYTSIYTPLASLSPEYQLPRSVPVVPSFVANDRADKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LPFQRFDITQTPPAYINVLPGLPQYTSIYTPLASLSPEYQLPRSVPVVPSFVANDRADKN
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE3 AAAYFEGHHLNAENVAGHQIASETQILEGSLGISVKSHCSTGDAHTVLSESNRNDEHCGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AAAYFEGHHLNAENVAGHQIASETQILEGSLGISVKSHCSTGDAHTVLSESNRNDEHCGN
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KE3 SNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIEKEHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIEKEHQ
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KE3 VLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQ
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KE3 QEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIE
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KE3 EYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRDPAAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRDPAAY
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KE3 PDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTV
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KE3 HPELLPESSGDDGQGLVTSASDVTGNHAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 HPELLPESSGDDGQGLVTSASDVTGNHAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPE
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KE3 ATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFPCYNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFPCYNS
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KE3 TELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPV
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KE3 TRSSQGSPSVVVAPSPKTKGQKAEDVPVRIALGASSCEICHEVFKSKNVRVLKCGHKYHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TRSSQGSPSVVVAPSPKTKGQKAEDVPVRIALGASSCEICHEVFKSKNVRVLKCGHKYHK
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020
pF1KE3 GCFKQWLKGQSACPACQGRDLLTEESPSGRGWPSQNQELPSCSSR
:::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GCFKQWLKGQSACPACQGRDLLTEESPSGRGWPSQNQELPSCSSR
1990 2000 2010 2020
2025 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 15:21:26 2016 done: Mon Nov 7 15:21:26 2016
Total Scan time: 4.390 Total Display time: 0.200
Function used was FASTA [36.3.4 Apr, 2011]