Result of FASTA (omim) for
pFN21AE3710
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3710, 288 aa
1>>>pF1KE3710 288 - 288 aa - 288 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0174+/-0.000302; mu= 11.4491+/- 0.019
mean_var=206.3036+/-40.026, 0's: 0 Z-trim(124.2): 145 B-trim: 0 in 0/58
Lambda= 0.089294
statistics sampled from 45332 (45535) to 45332 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.83), E-opt: 0.2 (0.534), width: 16
Scan time: 8.860
The best scores are: opt bits E(85289)
NP_115887 (OMIM: 300447) rhox homeobox family memb ( 288) 1981 266.7 3.7e-71
XP_005262541 (OMIM: 300447) PREDICTED: rhox homeob ( 166) 1066 148.5 8e-36
NP_703149 (OMIM: 300154) homeobox protein ESX1 [Ho ( 406) 401 63.3 8.6e-10
NP_644811 (OMIM: 300446) rhox homeobox family memb ( 184) 274 46.5 4.4e-05
XP_011529583 (OMIM: 300446) PREDICTED: rhox homeob ( 212) 274 46.6 4.8e-05
NP_057391 (OMIM: 604675) paired mesoderm homeobox ( 253) 263 45.3 0.00014
NP_115485 (OMIM: 604529) homeobox protein orthoped ( 325) 262 45.3 0.00018
XP_016870292 (OMIM: 604675) PREDICTED: paired meso ( 193) 255 44.1 0.00025
NP_620689 (OMIM: 300004,300215,300382,300419,30835 ( 562) 250 44.0 0.00076
NP_001297090 (OMIM: 106210,120430,136520,148190,16 ( 286) 236 41.9 0.0017
NP_001297089 (OMIM: 106210,120430,136520,148190,16 ( 286) 236 41.9 0.0017
NP_008833 (OMIM: 167420,202650) paired mesoderm ho ( 217) 233 41.3 0.0019
XP_006711451 (OMIM: 167420,202650) PREDICTED: pair ( 198) 231 41.0 0.0022
NP_001121084 (OMIM: 106210,120430,136520,148190,16 ( 422) 236 42.1 0.0022
NP_000271 (OMIM: 106210,120430,136520,148190,16555 ( 422) 236 42.1 0.0022
NP_001245393 (OMIM: 106210,120430,136520,148190,16 ( 422) 236 42.1 0.0022
NP_001245394 (OMIM: 106210,120430,136520,148190,16 ( 422) 236 42.1 0.0022
NP_001595 (OMIM: 106210,120430,136520,148190,16555 ( 436) 236 42.1 0.0023
NP_001297087 (OMIM: 106210,120430,136520,148190,16 ( 436) 236 42.1 0.0023
NP_001245391 (OMIM: 106210,120430,136520,148190,16 ( 436) 236 42.1 0.0023
NP_001245392 (OMIM: 106210,120430,136520,148190,16 ( 436) 236 42.1 0.0023
NP_073207 (OMIM: 167420,202650) paired mesoderm ho ( 245) 231 41.2 0.0025
NP_068745 (OMIM: 605420,609597,613451,615529) home ( 411) 231 41.4 0.0034
NP_006483 (OMIM: 136760,606014) homeobox protein a ( 343) 229 41.1 0.0036
NP_000316 (OMIM: 137600,180500,180550,601542,60422 ( 324) 225 40.5 0.005
NP_700476 (OMIM: 137600,180500,180550,601542,60422 ( 271) 220 39.8 0.007
XP_011530329 (OMIM: 137600,180500,180550,601542,60 ( 271) 220 39.8 0.007
NP_001191328 (OMIM: 137600,180500,180550,601542,60 ( 271) 220 39.8 0.007
NP_001297088 (OMIM: 106210,120430,136520,148190,16 ( 401) 222 40.3 0.0075
NP_006252 (OMIM: 262600,601538) homeobox protein p ( 226) 216 39.2 0.0089
>>NP_115887 (OMIM: 300447) rhox homeobox family member 2 (288 aa)
initn: 1981 init1: 1981 opt: 1981 Z-score: 1398.5 bits: 266.7 E(85289): 3.7e-71
Smith-Waterman score: 1981; 99.3% identity (99.7% similar) in 288 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KE3 MEPPDQCSQYMTSLLSPAVDDEKELQDMNAMVLSLTEEVKEEEEDAQPEPEQGTAAGEKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MEPPDQCSQYMTSLLSPAVDDEKELQDMNAMVLSLTEEVKEEEEDAQPEPEQGTAAGEKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KSAGAQGGEEKDGGGEEKDGGGAGVPGHLWEGNLEGTSGSDGNVEDSDQSEKEPGQQYSR
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
NP_115 KSAGAQGGEEKDGGGEEKDGGGAGVPGHLWEGDLEGTSGSDGNVEDSDQSEKEPGQQYSR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PQGAVGGLEPGNAQQPNVHAFTPLQLQELECIFQREQFPSEFLRRRLARSMNVTELAVQI
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
NP_115 PQGAVGGLEPGNAQQPNVHAFTPLQLQELERIFQREQFPSEFLRRRLARSMNVTELAVQI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 WFENRRAKWRRHQRALMARNMLPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 WFENRRAKWRRHQRALMARNMLPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSS
190 200 210 220 230 240
250 260 270 280
pF1KE3 SLCFPMPPFPPPSLPLPLMLLPPMPPAGQAEFGPFPFVIVPSFTFPNV
::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 SLCFPMPPFPPPSLPLPLMLLPPMPPAGQAEFGPFPFVIVPSFTFPNV
250 260 270 280
>>XP_005262541 (OMIM: 300447) PREDICTED: rhox homeobox f (166 aa)
initn: 1066 init1: 1066 opt: 1066 Z-score: 764.1 bits: 148.5 E(85289): 8e-36
Smith-Waterman score: 1066; 98.7% identity (99.4% similar) in 159 aa overlap (1-159:1-159)
10 20 30 40 50 60
pF1KE3 MEPPDQCSQYMTSLLSPAVDDEKELQDMNAMVLSLTEEVKEEEEDAQPEPEQGTAAGEKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEPPDQCSQYMTSLLSPAVDDEKELQDMNAMVLSLTEEVKEEEEDAQPEPEQGTAAGEKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KSAGAQGGEEKDGGGEEKDGGGAGVPGHLWEGNLEGTSGSDGNVEDSDQSEKEPGQQYSR
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
XP_005 KSAGAQGGEEKDGGGEEKDGGGAGVPGHLWEGDLEGTSGSDGNVEDSDQSEKEPGQQYSR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PQGAVGGLEPGNAQQPNVHAFTPLQLQELECIFQREQFPSEFLRRRLARSMNVTELAVQI
:::::::::::::::::::::::::::::: ::::::::
XP_005 PQGAVGGLEPGNAQQPNVHAFTPLQLQELERIFQREQFPKGGWQEA
130 140 150 160
190 200 210 220 230 240
pF1KE3 WFENRRAKWRRHQRALMARNMLPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSS
>>NP_703149 (OMIM: 300154) homeobox protein ESX1 [Homo s (406 aa)
initn: 431 init1: 263 opt: 401 Z-score: 296.8 bits: 63.3 E(85289): 8.6e-10
Smith-Waterman score: 409; 33.1% identity (56.7% similar) in 275 aa overlap (20-281:21-271)
10 20 30 40 50
pF1KE3 MEPPDQCSQYMTSLLSPAVDDEKELQDMNAMVLSLTEEVKEEEEDAQPEPEQGTAAGEK
.: .:..: . : :: . :.::... .:: :: : ..
NP_703 MESLRGYTHSDIGYRSLAVGEDIEEVNDEKLTVTSLMARGGEDEENTRSKPEYGTEAENN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 LKSAGAQGGEEKDGGGEEKDGGGAGVPGHLWE----GNLEGTSGSDGNVEDSDQSEKEPG
. . :. ....: ..:::. : . : . : . .: ....:. :
NP_703 VGTEGSVPSDDQD-----REGGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQEEPPQ
70 80 90 100 110
120 130 140 150 160 170
pF1KE3 QQYSRPQGAVG-----GLEPGNAQQPNVHAFTPLQLQELECIFQREQFPSEFLRRRLARS
:: : : : .: . .. ::: .:::::: .:.. :.:. :.:::
NP_703 TTVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAAR
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 MNVTELAVQIWFENRRAKWRRHQRALMARNMLPFMAVGQPVMVTAAEAITAPL--FISGM
.:.:: ::.::.::::::.:.::.:: :: ::. .. :: :..:
NP_703 LNLTEDRVQVWFQNRRAKWKRNQRVLMLRN-------------TATADLAHPLDMFLGGA
180 190 200 210 220
230 240 250 260 270 280
pF1KE3 RDDYFWDHSHSSSLCFPM-PPFP-PPSLPLPLMLLPPMPPAGQAEFGPFPFVIVPSFTFP
:. . . .:: . : .: :: ::.: : :: :: : :.. .:
NP_703 ---YYAAPALDPALCVHLVPQLPRPPVLPVPPM--PPRPPMVPMPPRP-PIAPMPPMAPV
230 240 250 260 270
pF1KE3 NV
NP_703 PPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPM
280 290 300 310 320 330
>>NP_644811 (OMIM: 300446) rhox homeobox family member 1 (184 aa)
initn: 250 init1: 213 opt: 274 Z-score: 212.2 bits: 46.5 E(85289): 4.4e-05
Smith-Waterman score: 275; 36.9% identity (61.2% similar) in 160 aa overlap (48-202:23-171)
20 30 40 50 60 70
pF1KE3 AVDDEKELQDMNAMVLSLTEEVKEEEEDAQPEPEQGTAAG-EKLKSAGAQG--GEEKDGG
: :. :.:.. : . :: : :. . :
NP_644 MARSLVHDTVFYCLSVYQVKISPTPQLGAASSAEGHVGQGAPGLMGNMNPEG
10 20 30 40 50
80 90 100 110 120 130
pF1KE3 GEEKDGGGAGVPGHLWEGNLEGTSGSDGNVEDSDQSEKEPGQQYSRPQGAVGGLEPGNAQ
: ....: : . ::. :: : .: . : . :.:. : .: : .
NP_644 GVNHENGMNRDGGMIPEGG-------GGNQEPRQQPQPPPEEP---AQAAMEGPQPEN-M
60 70 80 90 100
140 150 160 170 180 190
pF1KE3 QPNVH--AFTPLQLQELECIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRH
:: .. :: ::..::: .:.. :.:. ::.::....::: :..::.:.::. :::
NP_644 QPRTRRTKFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDKVRVWFKNKRARCRRH
110 120 130 140 150 160
200 210 220 230 240 250
pF1KE3 QRALMARNMLPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSSSLCFPMPPFPPP
:: :: : :
NP_644 QRELMLANELRADPDDCVYIVVD
170 180
>>XP_011529583 (OMIM: 300446) PREDICTED: rhox homeobox f (212 aa)
initn: 250 init1: 213 opt: 274 Z-score: 211.5 bits: 46.6 E(85289): 4.8e-05
Smith-Waterman score: 275; 36.9% identity (61.2% similar) in 160 aa overlap (48-202:51-199)
20 30 40 50 60 70
pF1KE3 AVDDEKELQDMNAMVLSLTEEVKEEEEDAQPEPEQGTAAG-EKLKSAGAQG--GEEKDGG
: :. :.:.. : . :: : :. . :
XP_011 VQGRSAPAMARSLVHDTVFYCLSVYQVKISPTPQLGAASSAEGHVGQGAPGLMGNMNPEG
30 40 50 60 70 80
80 90 100 110 120 130
pF1KE3 GEEKDGGGAGVPGHLWEGNLEGTSGSDGNVEDSDQSEKEPGQQYSRPQGAVGGLEPGNAQ
: ....: : . ::. :: : .: . : . :.:. : .: : .
XP_011 GVNHENGMNRDGGMIPEGG-------GGNQEPRQQPQPPPEEP---AQAAMEGPQPEN-M
90 100 110 120
140 150 160 170 180 190
pF1KE3 QPNVH--AFTPLQLQELECIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRH
:: .. :: ::..::: .:.. :.:. ::.::....::: :..::.:.::. :::
XP_011 QPRTRRTKFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDKVRVWFKNKRARCRRH
130 140 150 160 170 180
200 210 220 230 240 250
pF1KE3 QRALMARNMLPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSSSLCFPMPPFPPP
:: :: : :
XP_011 QRELMLANELRADPDDCVYIVVD
190 200 210
>>NP_057391 (OMIM: 604675) paired mesoderm homeobox prot (253 aa)
initn: 240 init1: 222 opt: 263 Z-score: 203.0 bits: 45.3 E(85289): 0.00014
Smith-Waterman score: 270; 31.2% identity (57.1% similar) in 205 aa overlap (51-253:47-218)
30 40 50 60 70 80
pF1KE3 DEKELQDMNAMVLSLTEEVKEEEEDAQPEPEQGTAAGEKLKSAGAQGGEEKDGGGEEKDG
:. .:::. ::.. : ..:...: .:
NP_057 PGPPPPPPALGPGDCAQARKNFSVSHLLDLEEVAAAGRLAARPGARA-EAREGAAREPSG
20 30 40 50 60 70
90 100 110 120 130 140
pF1KE3 GGAGVPGHLWEGNLEGTSGSDGNVEDSDQSEKEPGQQYSRPQGAVGGLEPGNAQQPNVHA
: .:::.. .:.. :. .: . :. : .
NP_057 G---------------SSGSEAAPQDGECPSPGRGSAAKRKK----------KQRRNRTT
80 90 100 110
150 160 170 180 190
pF1KE3 FTPLQLQELECIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRALMA-R
:. ::: :: .:.: ..:. :.:..::: .:..: ::.::.:::::.::..::..: :
NP_057 FNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLASR
120 130 140 150 160 170
200 210 220 230 240 250
pF1KE3 NMLPFMAVGQPVMVTAAEAITAPLFISGMRDDYF-WDHSHSSSLCFPMPPFPPPSLPLPL
. . . .: . : : .:: ... ::. : : : .::. : :
NP_057 SASLLKSYSQEA---AIEQPVAPR-PTALSPDYLSWTASSPYST---VPPYSPGSSGPAT
180 190 200 210 220
260 270 280
pF1KE3 MLLPPMPPAGQAEFGPFPFVIVPSFTFPNV
NP_057 PGVNMANSIASLRLKAKEFSLHHSQVPTVN
230 240 250
>>NP_115485 (OMIM: 604529) homeobox protein orthopedia [ (325 aa)
initn: 234 init1: 210 opt: 262 Z-score: 201.1 bits: 45.3 E(85289): 0.00018
Smith-Waterman score: 262; 29.6% identity (58.7% similar) in 206 aa overlap (58-248:25-224)
30 40 50 60 70
pF1KE3 MNAMVLSLTEEVKEEEEDAQPEPEQGTAAGEKLKSAGAQGGEEKDGGGEEKD--------
: .: . :: .: ::. :
NP_115 MLSHADLLDARLGMKDAAELLGHREAVKCRLGVGG--SDPGGHPGDLAPNSDPV
10 20 30 40 50
80 90 100 110 120 130
pF1KE3 GGGAGVPGHLWEGNLEGTSGSDGNVEDSDQSEKEPGQQYSRPQGAVGGLEPGNAQQPNVH
:.. .::. . . :.. .. : .: .:.:: : . :. . .: . :. .: .
NP_115 EGATLLPGE--DITTVGSTPASLAVSAKDP-DKQPGPQGG-PNPSQAGQQQGQQKQKRHR
60 70 80 90 100
140 150 160 170 180 190
pF1KE3 A-FTPLQLQELECIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRALMA
. ::: ::.::: : . ..:. :.:..:: ...:: ::.::.::::::...... .
NP_115 TRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNV
110 120 130 140 150 160
200 210 220 230 240 250
pF1KE3 R----NMLPFMAVGQ-PVMVTAAEAITAPLFISGMRDDYFWDHSHSSSLC-FPMPPFPPP
..:: .. : : ..:: : . . : .: : . .. .:.::
NP_115 FRAPGTLLPTPGLPQFPSAAAAAAAAMGDSLCSFHANDTRWAAAAMPGVSQLPLPPALGR
170 180 190 200 210 220
260 270 280
pF1KE3 SLPLPLMLLPPMPPAGQAEFGPFPFVIVPSFTFPNV
NP_115 QQAMAQSLSQCSLAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVS
230 240 250 260 270 280
>>XP_016870292 (OMIM: 604675) PREDICTED: paired mesoderm (193 aa)
initn: 240 init1: 222 opt: 255 Z-score: 198.7 bits: 44.1 E(85289): 0.00025
Smith-Waterman score: 255; 38.5% identity (65.6% similar) in 122 aa overlap (134-253:44-158)
110 120 130 140 150 160
pF1KE3 VEDSDQSEKEPGQQYSRPQGAVGGLEPGNAQQPNVHAFTPLQLQELECIFQREQFPSEFL
:. : .:. ::: :: .:.: ..:. :.
XP_016 GHRLKVTELGCGEGECPSPGRGSAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFV
20 30 40 50 60 70
170 180 190 200 210 220
pF1KE3 RRRLARSMNVTELAVQIWFENRRAKWRRHQRALMA-RNMLPFMAVGQPVMVTAAEAITAP
:..::: .:..: ::.::.:::::.::..::..: :. . . .: . : : .::
XP_016 REELARRVNLSEARVQVWFQNRRAKFRRNERAMLASRSASLLKSYSQEA---AIEQPVAP
80 90 100 110 120 130
230 240 250 260 270 280
pF1KE3 LFISGMRDDYF-WDHSHSSSLCFPMPPFPPPSLPLPLMLLPPMPPAGQAEFGPFPFVIVP
... ::. : : : .::. : :
XP_016 R-PTALSPDYLSWTASSPYST---VPPYSPGSSGPATPGVNMANSIASLRLKAKEFSLHH
140 150 160 170 180
pF1KE3 SFTFPNV
XP_016 SQVPTVN
190
>>NP_620689 (OMIM: 300004,300215,300382,300419,308350,30 (562 aa)
initn: 293 init1: 208 opt: 250 Z-score: 190.0 bits: 44.0 E(85289): 0.00076
Smith-Waterman score: 259; 27.7% identity (48.9% similar) in 274 aa overlap (20-286:225-479)
10 20 30 40
pF1KE3 MEPPDQCSQYMTSLLSPAVDDEKELQDMNAMVLSLTEEVKEEEEDAQPE
:::.:: . . . ::. :..:. :
NP_620 PGGVTHPEERLGVAGGPGSAPAAGGGTGTEDDEEELLE-DEEDEDEEEELLEDDEEELLE
200 210 220 230 240 250
50 60 70 80 90 100
pF1KE3 PEQGTAAGEKLKS-AGAQGGEEKDGGGEEKDGGGAGVPGHLWEGNLEGTSGSDG--NVED
. . : . ..: :. ... :: : . . : . :.:: .:
NP_620 DDARALLKEPRRCPVAATGAVAAAAAAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCL
260 270 280 290 300 310
110 120 130 140 150 160
pF1KE3 SDQSEKEPGQQYSRPQGAVGGLEPGNAQQPNVHAFTPLQLQELECIFQREQFPSEFLRRR
: :..: : . :. .:: ::.::: ::. ..:. : :..
NP_620 SAGSDSEEGLLKRK-------------QRRYRTTFTSYQLEELERAFQKTHYPDVFTREE
320 330 340 350 360
170 180 190 200 210 220
pF1KE3 LARSMNVTELAVQIWFENRRAKWRRHQRALMARNMLPFMAVGQPVMVTAAEAI---TAPL
:: ...:: ::.::.:::::::....: :.. : . :. .: . ..:.
NP_620 LAMRLDLTEARVQVWFQNRRAKWRKREKA-GAQTHPPGLPFPGPLSATHPLSPYLDASPF
370 380 390 400 410
230 240 250 260 270 280
pF1KE3 FISGMRDDYFWDHSHSSSLC-FPMPPFPPPSLPLPLMLLPPMPPAGQAEFGPFPFVIVPS
: : . ... :: : :: : :: : : : . : :.
NP_620 PPHHPALDSAWTAAAAAAAAAFPSLPPPPGSASLP----PSGAPLGLSTFLGAAVFRHPA
420 430 440 450 460 470
pF1KE3 FTFPNV
: :
NP_620 FISPAFGRLFSTMAPLTSASTAAALLRQPTPAVEGAVASGALADPATAAADRRASSIAAL
480 490 500 510 520 530
>>NP_001297090 (OMIM: 106210,120430,136520,148190,165550 (286 aa)
initn: 291 init1: 188 opt: 236 Z-score: 183.6 bits: 41.9 E(85289): 0.0017
Smith-Waterman score: 248; 28.6% identity (52.2% similar) in 203 aa overlap (82-265:29-212)
60 70 80 90 100
pF1KE3 QGTAAGEKLKSAGAQGGEEKDGGGEEKDGGGAGVPGH-------LWEGNLEGTSGSDGNV
:..:::. ::. :.:.. ..:
NP_001 MGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNG
10 20 30 40 50
110 120 130 140 150 160
pF1KE3 EDSDQSEKEPGQQYSRPQGAVGGLEPGNAQQPNVHAFTPLQLQELECIFQREQFPSEFLR
::::... . : .: : : .:: :.. :: :.: ..:. : :
NP_001 EDSDEAQMR--LQLKRKL------------QRNRTSFTQEQIEALEKEFERTHYPDVFAR
60 70 80 90 100
170 180 190 200 210 220
pF1KE3 RRLARSMNVTELAVQIWFENRRAKWRRHQRALMARNMLPFMAVGQPVMVTAAEAITAPL-
.::: .... : .:.:: ::::::::... : . :. . . .. :.
NP_001 ERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIP
110 120 130 140 150 160
230 240 250 260 270
pF1KE3 --------FISGM---RDDYFWDHSHSSSLCFPMPPFPPPSLPLPLMLLPPMPPAGQAEF
: :: : : ...:. .::.: .. : . ::.:
NP_001 QPTTPVSSFTSGSMLGRTDTALTNTYSA-----LPPMPSFTMANNLPMQPPVPSQTSSYS
170 180 190 200 210
280
pF1KE3 GPFPFVIVPSFTFPNV
NP_001 CMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMS
220 230 240 250 260 270
288 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 06:42:34 2016 done: Sun Nov 6 06:42:36 2016
Total Scan time: 8.860 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]