Result of FASTA (ccds) for
pFN21AE3704
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3704, 1143 aa
1>>>pF1KE3704 1143 - 1143 aa - 1143 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0125+/-0.00107; mu= 18.0063+/- 0.064
mean_var=65.2168+/-12.904, 0's: 0 Z-trim(102.4): 15 B-trim: 4 in 1/49
Lambda= 0.158816
statistics sampled from 6930 (6936) to 6930 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.573), E-opt: 0.2 (0.213), width: 16
Scan time: 3.840
The best scores are: opt bits E(32554)
CCDS43686.1 NCAPG2 gene_id:54892|Hs108|chr7 (1143) 7523 1733.2 0
CCDS64816.1 NCAPG2 gene_id:54892|Hs108|chr7 (1156) 7432 1712.4 0
>>CCDS43686.1 NCAPG2 gene_id:54892|Hs108|chr7 (1143 aa)
initn: 7523 init1: 7523 opt: 7523 Z-score: 9302.9 bits: 1733.2 E(32554): 0
Smith-Waterman score: 7523; 100.0% identity (100.0% similar) in 1143 aa overlap (1-1143:1-1143)
10 20 30 40 50 60
pF1KE3 MEKRETFVQAVSKELVGEFLQFVQLDKEASDPFSLNELLDELSRKQKEELWQRLKNLLTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MEKRETFVQAVSKELVGEFLQFVQLDKEASDPFSLNELLDELSRKQKEELWQRLKNLLTD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VLLESPVDGWQVVEAQGEDNMETEHGSKMRKSIEIIYAITSVILASVSVINESENYEALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VLLESPVDGWQVVEAQGEDNMETEHGSKMRKSIEIIYAITSVILASVSVINESENYEALL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ECVIILNGILYALPESERKLQSSIQDLCVTWWEKGLPAKEDTGKTAFVMLLRRSLETKTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ECVIILNGILYALPESERKLQSSIQDLCVTWWEKGLPAKEDTGKTAFVMLLRRSLETKTG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ADVCRLWRIHQALYCFDYDLEESGEIKDMLLECFININYIKKEEGRRFLSCLFNWNINFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ADVCRLWRIHQALYCFDYDLEESGEIKDMLLECFININYIKKEEGRRFLSCLFNWNINFI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 KMIHGTIKNQLQGLQKSLMVYIAEIYFRAWKKASGKILEAIENDCIQDFMFHGIHLPRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KMIHGTIKNQLQGLQKSLMVYIAEIYFRAWKKASGKILEAIENDCIQDFMFHGIHLPRRS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 PVHSKVREVLSYFHHQKKVRQGVEEMLYRLYKPILWRGLKARNSEVRSNAALLFVEAFPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PVHSKVREVLSYFHHQKKVRQGVEEMLYRLYKPILWRGLKARNSEVRSNAALLFVEAFPI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 RDPNLHAIEMDSEIQKQFEELYSLLEDPYPMVRSTGILGVCKITSKYWEMMPPTILIDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RDPNLHAIEMDSEIQKQFEELYSLLEDPYPMVRSTGILGVCKITSKYWEMMPPTILIDLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 KKVTGELAFDTSSADVRCSVFKCLPMILDNKLSHPLLEQLLPALRYSLHDNSEKVRVAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KKVTGELAFDTSSADVRCSVFKCLPMILDNKLSHPLLEQLLPALRYSLHDNSEKVRVAFV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 DMLLKIKAVRAAKFWKICPMEHILVRLETDSRPVSRRLVSLIFNSFLPVNQPEEVWCERC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DMLLKIKAVRAAKFWKICPMEHILVRLETDSRPVSRRLVSLIFNSFLPVNQPEEVWCERC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 VTLVQMNHAAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VTLVQMNHAAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGRE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 KENVTVLDKTLSVNDVACMAGLLEIIVILWKSIDRSMENNKEAKLYTINKFASVLPEYLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KENVTVLDKTLSVNDVACMAGLLEIIVILWKSIDRSMENNKEAKLYTINKFASVLPEYLK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 VFKDDRCKIPLFMLMSFMPASAVPPFSCGVISTLRSREEGAVDKSYCTLLDCLCSWGQVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VFKDDRCKIPLFMLMSFMPASAVPPFSCGVISTLRSREEGAVDKSYCTLLDCLCSWGQVG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 HILELVDNWLPTEHAQAKSNTASKGRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HILELVDNWLPTEHAQAKSNTASKGRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLSA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 PRKKLNHLLKALETSKADLESLLQTPGGKPRGFSEAAAPRAFGLHCRLSIHLQHKFCSEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PRKKLNHLLKALETSKADLESLLQTPGGKPRGFSEAAAPRAFGLHCRLSIHLQHKFCSEG
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE3 KVYLSMLEDTGFWLESKILSFIQDQEEDYLKLHRVIYQQIIQTYLTVCKDVVMVGLGDHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KVYLSMLEDTGFWLESKILSFIQDQEEDYLKLHRVIYQQIIQTYLTVCKDVVMVGLGDHQ
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE3 FQMQLLQRSLGIMQTVKGFFYVSLLLDILKEITGSSLIQKTDSDEEVAMLLDTVQKVFQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FQMQLLQRSLGIMQTVKGFFYVSLLLDILKEITGSSLIQKTDSDEEVAMLLDTVQKVFQK
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE3 MLECIARSFRKQPEEGLRLLYSVQRPLHEFITAVQSRHTDTPVHRGVLSTLIAGPVVEIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MLECIARSFRKQPEEGLRLLYSVQRPLHEFITAVQSRHTDTPVHRGVLSTLIAGPVVEIS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE3 HQLRKVSDVEELTPPEHLSDLPPFSRCLIGIIIKSSNVVRSFLDELKACVASNDIEGIVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HQLRKVSDVEELTPPEHLSDLPPFSRCLIGIIIKSSNVVRSFLDELKACVASNDIEGIVC
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE3 LTAAVHIILVINAGKHKSSKVREVAATVHRKLKTFMEITLEEDSIERFLYESSSRTLGEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LTAAVHIILVINAGKHKSSKVREVAATVHRKLKTFMEITLEEDSIERFLYESSSRTLGEL
1090 1100 1110 1120 1130 1140
pF1KE3 LNS
:::
CCDS43 LNS
>>CCDS64816.1 NCAPG2 gene_id:54892|Hs108|chr7 (1156 aa)
initn: 7463 init1: 7432 opt: 7432 Z-score: 9190.2 bits: 1712.4 E(32554): 0
Smith-Waterman score: 7432; 99.9% identity (100.0% similar) in 1128 aa overlap (1-1128:1-1128)
10 20 30 40 50 60
pF1KE3 MEKRETFVQAVSKELVGEFLQFVQLDKEASDPFSLNELLDELSRKQKEELWQRLKNLLTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 MEKRETFVQAVSKELVGEFLQFVQLDKEASDPFSLNELLDELSRKQKEELWQRLKNLLTD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VLLESPVDGWQVVEAQGEDNMETEHGSKMRKSIEIIYAITSVILASVSVINESENYEALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 VLLESPVDGWQVVEAQGEDNMETEHGSKMRKSIEIIYAITSVILASVSVINESENYEALL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ECVIILNGILYALPESERKLQSSIQDLCVTWWEKGLPAKEDTGKTAFVMLLRRSLETKTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 ECVIILNGILYALPESERKLQSSIQDLCVTWWEKGLPAKEDTGKTAFVMLLRRSLETKTG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ADVCRLWRIHQALYCFDYDLEESGEIKDMLLECFININYIKKEEGRRFLSCLFNWNINFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 ADVCRLWRIHQALYCFDYDLEESGEIKDMLLECFININYIKKEEGRRFLSCLFNWNINFI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 KMIHGTIKNQLQGLQKSLMVYIAEIYFRAWKKASGKILEAIENDCIQDFMFHGIHLPRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 KMIHGTIKNQLQGLQKSLMVYIAEIYFRAWKKASGKILEAIENDCIQDFMFHGIHLPRRS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 PVHSKVREVLSYFHHQKKVRQGVEEMLYRLYKPILWRGLKARNSEVRSNAALLFVEAFPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 PVHSKVREVLSYFHHQKKVRQGVEEMLYRLYKPILWRGLKARNSEVRSNAALLFVEAFPI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 RDPNLHAIEMDSEIQKQFEELYSLLEDPYPMVRSTGILGVCKITSKYWEMMPPTILIDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 RDPNLHAIEMDSEIQKQFEELYSLLEDPYPMVRSTGILGVCKITSKYWEMMPPTILIDLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 KKVTGELAFDTSSADVRCSVFKCLPMILDNKLSHPLLEQLLPALRYSLHDNSEKVRVAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 KKVTGELAFDTSSADVRCSVFKCLPMILDNKLSHPLLEQLLPALRYSLHDNSEKVRVAFV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 DMLLKIKAVRAAKFWKICPMEHILVRLETDSRPVSRRLVSLIFNSFLPVNQPEEVWCERC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 DMLLKIKAVRAAKFWKICPMEHILVRLETDSRPVSRRLVSLIFNSFLPVNQPEEVWCERC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 VTLVQMNHAAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 VTLVQMNHAAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGRE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 KENVTVLDKTLSVNDVACMAGLLEIIVILWKSIDRSMENNKEAKLYTINKFASVLPEYLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 KENVTVLDKTLSVNDVACMAGLLEIIVILWKSIDRSMENNKEAKLYTINKFASVLPEYLK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 VFKDDRCKIPLFMLMSFMPASAVPPFSCGVISTLRSREEGAVDKSYCTLLDCLCSWGQVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 VFKDDRCKIPLFMLMSFMPASAVPPFSCGVISTLRSREEGAVDKSYCTLLDCLCSWGQVG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 HILELVDNWLPTEHAQAKSNTASKGRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 HILELVDNWLPTEHAQAKSNTASKGRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLSA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 PRKKLNHLLKALETSKADLESLLQTPGGKPRGFSEAAAPRAFGLHCRLSIHLQHKFCSEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 PRKKLNHLLKALETSKADLESLLQTPGGKPRGFSEAAAPRAFGLHCRLSIHLQHKFCSEG
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE3 KVYLSMLEDTGFWLESKILSFIQDQEEDYLKLHRVIYQQIIQTYLTVCKDVVMVGLGDHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 KVYLSMLEDTGFWLESKILSFIQDQEEDYLKLHRVIYQQIIQTYLTVCKDVVMVGLGDHQ
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE3 FQMQLLQRSLGIMQTVKGFFYVSLLLDILKEITGSSLIQKTDSDEEVAMLLDTVQKVFQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 FQMQLLQRSLGIMQTVKGFFYVSLLLDILKEITGSSLIQKTDSDEEVAMLLDTVQKVFQK
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE3 MLECIARSFRKQPEEGLRLLYSVQRPLHEFITAVQSRHTDTPVHRGVLSTLIAGPVVEIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 MLECIARSFRKQPEEGLRLLYSVQRPLHEFITAVQSRHTDTPVHRGVLSTLIAGPVVEIS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE3 HQLRKVSDVEELTPPEHLSDLPPFSRCLIGIIIKSSNVVRSFLDELKACVASNDIEGIVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 HQLRKVSDVEELTPPEHLSDLPPFSRCLIGIIIKSSNVVRSFLDELKACVASNDIEGIVC
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE3 LTAAVHIILVINAGKHKSSKVREVAATVHRKLKTFMEITLEEDSIERFLYESSSRTLGEL
:::::::::::::::::::::::::::::::::::::::::::::::.
CCDS64 LTAAVHIILVINAGKHKSSKVREVAATVHRKLKTFMEITLEEDSIERYEDLLCCPGWALT
1090 1100 1110 1120 1130 1140
pF1KE3 LNS
CCDS64 PGLLDSIYPSASVPIG
1150
1143 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 17:54:38 2016 done: Mon Nov 7 17:54:39 2016
Total Scan time: 3.840 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]