Result of FASTA (ccds) for
pFN21AE3694
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3694, 92 aa
1>>>pF1KE3694 92 - 92 aa - 92 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4919+/-0.000521; mu= 13.1655+/- 0.031
mean_var=52.5110+/-10.239, 0's: 0 Z-trim(113.0): 50 B-trim: 32 in 1/50
Lambda= 0.176990
statistics sampled from 13650 (13706) to 13650 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.801), E-opt: 0.2 (0.421), width: 16
Scan time: 1.140
The best scores are: opt bits E(32554)
CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17 ( 92) 602 160.3 1.5e-40
CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17 ( 87) 570 152.1 4.2e-38
CCDS77002.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 96) 441 119.2 3.8e-28
CCDS77000.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 103) 435 117.7 1.2e-27
CCDS77001.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 103) 432 116.9 2e-27
CCDS76999.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 64) 427 115.5 3.3e-27
CCDS77004.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 64) 427 115.5 3.3e-27
CCDS77003.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 86) 427 115.6 4.1e-27
CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17 ( 93) 423 114.6 8.9e-27
CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17 ( 92) 388 105.7 4.3e-24
CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17 ( 93) 311 86.0 3.6e-18
CCDS11300.1 CCL5 gene_id:6352|Hs108|chr17 ( 91) 308 85.2 6e-18
CCDS11306.1 CCL18 gene_id:6362|Hs108|chr17 ( 89) 295 81.9 5.9e-17
CCDS45652.1 CCL14 gene_id:6358|Hs108|chr17 ( 109) 289 80.4 2e-16
CCDS11281.1 CCL13 gene_id:6357|Hs108|chr17 ( 98) 270 75.5 5.3e-15
CCDS11278.1 CCL7 gene_id:6354|Hs108|chr17 ( 99) 255 71.7 7.7e-14
CCDS5578.1 CCL26 gene_id:10344|Hs108|chr7 ( 94) 252 70.9 1.2e-13
CCDS11303.1 CCL16 gene_id:6360|Hs108|chr17 ( 120) 249 70.2 2.6e-13
CCDS11280.1 CCL8 gene_id:6355|Hs108|chr17 ( 99) 245 69.2 4.5e-13
CCDS11279.1 CCL11 gene_id:6356|Hs108|chr17 ( 97) 236 66.9 2.2e-12
CCDS11277.1 CCL2 gene_id:6347|Hs108|chr17 ( 99) 230 65.3 6.4e-12
CCDS34670.1 CCL24 gene_id:6369|Hs108|chr7 ( 119) 217 62.1 7.4e-11
>>CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17 (92 aa)
initn: 602 init1: 602 opt: 602 Z-score: 841.3 bits: 160.3 E(32554): 1.5e-40
Smith-Waterman score: 602; 96.7% identity (98.9% similar) in 92 aa overlap (1-92:1-92)
10 20 30 40 50 60
pF1KE3 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:::::::::::.::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS11 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE3 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN
:::::::::.::::::::::::::::::::::
CCDS11 PAVVFQTKRSKQVCADPSESWVQEYVYDLELN
70 80 90
>>CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17 (87 aa)
initn: 576 init1: 427 opt: 570 Z-score: 797.5 bits: 152.1 E(32554): 4.2e-38
Smith-Waterman score: 570; 94.6% identity (94.6% similar) in 92 aa overlap (1-92:1-87)
10 20 30 40 50 60
pF1KE3 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE3 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN
:::: :::::::::::::::::::::::
CCDS32 PAVV-----GKQVCADPSESWVQEYVYDLELN
70 80
>>CCDS77002.1 CCL4L2 gene_id:9560|Hs108|chr17 (96 aa)
initn: 427 init1: 427 opt: 441 Z-score: 618.9 bits: 119.2 E(32554): 3.8e-28
Smith-Waterman score: 441; 84.0% identity (86.4% similar) in 81 aa overlap (1-81:1-81)
10 20 30 40 50 60
pF1KE3 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE3 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN
:::: : .. : : :
CCDS77 PAVVAAPGRIPSTRAAPHGPWSGRGRCLPQARDKAR
70 80 90
>>CCDS77000.1 CCL4L2 gene_id:9560|Hs108|chr17 (103 aa)
initn: 427 init1: 427 opt: 435 Z-score: 610.1 bits: 117.7 E(32554): 1.2e-27
Smith-Waterman score: 435; 85.2% identity (87.7% similar) in 81 aa overlap (1-77:1-81)
10 20 30 40 50 60
pF1KE3 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE3 PAVVFQTKRGK--QVCA--DPSESWVQEYVYDLELN
:::: .: : :. ::
CCDS77 PAVVEWKLQGVCFQCCSGKDPIHQSCPTWTMVRQRKMPTTGKG
70 80 90 100
>>CCDS77001.1 CCL4L2 gene_id:9560|Hs108|chr17 (103 aa)
initn: 432 init1: 432 opt: 432 Z-score: 606.0 bits: 116.9 E(32554): 2e-27
Smith-Waterman score: 432; 97.0% identity (100.0% similar) in 66 aa overlap (1-66:1-66)
10 20 30 40 50 60
pF1KE3 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE3 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN
::::..
CCDS77 PAVVYRESASSAAPGRIPSTRAAPHGPWSGRGRCLPQARDKAR
70 80 90 100
>>CCDS76999.1 CCL4L2 gene_id:9560|Hs108|chr17 (64 aa)
initn: 427 init1: 427 opt: 427 Z-score: 602.1 bits: 115.5 E(32554): 3.3e-27
Smith-Waterman score: 427; 100.0% identity (100.0% similar) in 64 aa overlap (1-64:1-64)
10 20 30 40 50 60
pF1KE3 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE3 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN
::::
CCDS76 PAVV
>>CCDS77004.1 CCL4L2 gene_id:9560|Hs108|chr17 (64 aa)
initn: 427 init1: 427 opt: 427 Z-score: 602.1 bits: 115.5 E(32554): 3.3e-27
Smith-Waterman score: 427; 100.0% identity (100.0% similar) in 64 aa overlap (1-64:1-64)
10 20 30 40 50 60
pF1KE3 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE3 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN
::::
CCDS77 PAVV
>>CCDS77003.1 CCL4L2 gene_id:9560|Hs108|chr17 (86 aa)
initn: 427 init1: 427 opt: 427 Z-score: 600.2 bits: 115.6 E(32554): 4.1e-27
Smith-Waterman score: 427; 100.0% identity (100.0% similar) in 64 aa overlap (1-64:1-64)
10 20 30 40 50 60
pF1KE3 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE3 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN
::::
CCDS77 PAVVAAPHGPWSGRGRCLPQARDKAR
70 80
>>CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17 (93 aa)
initn: 435 init1: 386 opt: 423 Z-score: 594.2 bits: 114.6 E(32554): 8.9e-27
Smith-Waterman score: 423; 59.8% identity (90.2% similar) in 92 aa overlap (1-92:1-92)
10 20 30 40 50 60
pF1KE3 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:.. ...:..:. . :.:. .::::...: :::::::::.:..:.::..::.:::: ::.
CCDS32 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
10 20 30 40 50 60
70 80 90
pF1KE3 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN
:.:.: ::::.:::::::: :::.:: ::::.
CCDS32 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
70 80 90
>>CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17 (92 aa)
initn: 383 init1: 361 opt: 388 Z-score: 546.0 bits: 105.7 E(32554): 4.3e-24
Smith-Waterman score: 388; 56.5% identity (88.0% similar) in 92 aa overlap (1-92:1-91)
10 20 30 40 50 60
pF1KE3 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:.. ...:..:. . :.:. .:: ...: :::::::::.:..:.::..::.:::: ::.
CCDS11 MQVSTAALAVLLCTMALCN-QFSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
10 20 30 40 50
70 80 90
pF1KE3 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN
:.:.: :::..:::::::: :::.:: ::::.
CCDS11 PGVIFLTKRSRQVCADPSEEWVQKYVSDLELSA
60 70 80 90
92 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 19:04:40 2016 done: Mon Nov 7 19:04:41 2016
Total Scan time: 1.140 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]