Result of FASTA (ccds) for
pFN21AE3687
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3687, 485 aa
1>>>pF1KE3687 485 - 485 aa - 485 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.3582+/-0.00159; mu= -0.5982+/- 0.091
mean_var=427.6470+/-104.810, 0's: 0 Z-trim(107.1): 553 B-trim: 438 in 1/51
Lambda= 0.062020
statistics sampled from 8725 (9399) to 8725 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.289), width: 16
Scan time: 2.650
The best scores are: opt bits E(32554)
CCDS3227.1 ZNF639 gene_id:51193|Hs108|chr3 ( 485) 3386 318.3 1.2e-86
CCDS55390.1 ZFX gene_id:7543|Hs108|chrX ( 576) 586 67.9 3.3e-11
CCDS14211.1 ZFX gene_id:7543|Hs108|chrX ( 805) 586 68.1 4.1e-11
CCDS83461.1 ZFX gene_id:7543|Hs108|chrX ( 844) 586 68.1 4.2e-11
CCDS48200.1 ZFY gene_id:7544|Hs108|chrY ( 610) 582 67.6 4.4e-11
CCDS48201.1 ZFY gene_id:7544|Hs108|chrY ( 724) 582 67.7 4.9e-11
CCDS14774.1 ZFY gene_id:7544|Hs108|chrY ( 801) 582 67.7 5.2e-11
>>CCDS3227.1 ZNF639 gene_id:51193|Hs108|chr3 (485 aa)
initn: 3386 init1: 3386 opt: 3386 Z-score: 1669.4 bits: 318.3 E(32554): 1.2e-86
Smith-Waterman score: 3386; 100.0% identity (100.0% similar) in 485 aa overlap (1-485:1-485)
10 20 30 40 50 60
pF1KE3 MNEYPKKRKRKTLHPSRYSDSSGISRIADGFNGIFSDHCYSVCSMRQPDLKYFDNKDDDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MNEYPKKRKRKTLHPSRYSDSSGISRIADGFNGIFSDHCYSVCSMRQPDLKYFDNKDDDS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 DTETSNDLPKFADGIKARNRNQNYLVPSPVLRILDHTAFSTEKSADIVICDEECDSPESV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 DTETSNDLPKFADGIKARNRNQNYLVPSPVLRILDHTAFSTEKSADIVICDEECDSPESV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 NQQTQEESPIEVHTAEDVPIAVEVHAISEDYDIETENNSSESLQDQTDEEPPAKLCKILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 NQQTQEESPIEVHTAEDVPIAVEVHAISEDYDIETENNSSESLQDQTDEEPPAKLCKILD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 KSQALNVTAQQKWPLLRANSSGLYKCELCEFNSKYFSDLKQHMILKHKRTDSNVCRVCKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KSQALNVTAQQKWPLLRANSSGLYKCELCEFNSKYFSDLKQHMILKHKRTDSNVCRVCKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 SFSTNMLLIEHAKLHEEDPYICKYCDYKTVIFENLSQHIADTHFSDHLYWCEQCDVQFSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SFSTNMLLIEHAKLHEEDPYICKYCDYKTVIFENLSQHIADTHFSDHLYWCEQCDVQFSS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 SSELYLHFQEHSCDEQYLCQFCEHETNDPEDLHSHVVNEHACKLIELSDKYNNGEHGQYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SSELYLHFQEHSCDEQYLCQFCEHETNDPEDLHSHVVNEHACKLIELSDKYNNGEHGQYS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 LLSKITFDKCKNFFVCQVCGFRSRLHTNVNRHVAIEHTKIFPHVCDDCGKGFSSMLEYCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LLSKITFDKCKNFFVCQVCGFRSRLHTNVNRHVAIEHTKIFPHVCDDCGKGFSSMLEYCK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 HLNSHLSEGIYLCQYCEYSTGQIEDLKIHLDFKHSADLPHKCSDCLMRFGNERELISHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 HLNSHLSEGIYLCQYCEYSTGQIEDLKIHLDFKHSADLPHKCSDCLMRFGNERELISHLP
430 440 450 460 470 480
pF1KE3 VHETT
:::::
CCDS32 VHETT
>>CCDS55390.1 ZFX gene_id:7543|Hs108|chrX (576 aa)
initn: 1152 init1: 472 opt: 586 Z-score: 314.6 bits: 67.9 E(32554): 3.3e-11
Smith-Waterman score: 586; 29.2% identity (58.7% similar) in 281 aa overlap (203-482:289-569)
180 190 200 210 220 230
pF1KE3 AKLCKILDKSQALNVTAQQKWPLLRANSSGLYKCELCEFNSKYFSDLKQHMILKHKRTDS
..::..::... . :..:.. :...
CCDS55 IECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP
260 270 280 290 300 310
240 250 260 270 280 290
pF1KE3 NVCRVCKESFSTNMLLIEHAKLHE-EDPYICKYCDYKTVIFENLSQHIADTHFSDHLYWC
..: : ..: : .: ..: : :: :.::.:... ::. :. : .. . :
CCDS55 HICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKC
320 330 340 350 360 370
300 310 320 330 340 350
pF1KE3 EQCDVQFSSSSELYLHFQEHSCDEQYLCQFCEHETNDPEDLHSHVVNEHACKLIELSDKY
. : . ::...:. : :. .. . : :.:.... ::. :... :. . :
CCDS55 DICLLTFSDTKEVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMC
380 390 400 410 420 430
360 370 380 390 400 410
pF1KE3 NNGEHGQYSLLSKITFDKCKNFFVCQVCGFRSRLHTNVNRHVAIEHTKIFPHVCDDCGKG
..: : : .... : :.. :. : :. ..::. ::: .: : : ::
CCDS55 DKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG
440 450 460 470 480 490
420 430 440 450 460 470
pF1KE3 FSSMLEYCKHLNSHLSEGIYLCQYCEYSTGQIEDLKIHLDFKHSADLPHKCSDCLMRFGN
: .. : ::...: .. .: :.:::::: . .: :. :. : ::.: : :
CCDS55 FRQQSELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRR
500 510 520 530 540 550
480
pF1KE3 ERELISHLPVHETT
: .:. :
CCDS55 PSEKNQHIMRHHKEVGLP
560 570
>>CCDS14211.1 ZFX gene_id:7543|Hs108|chrX (805 aa)
initn: 1152 init1: 472 opt: 586 Z-score: 313.1 bits: 68.1 E(32554): 4.1e-11
Smith-Waterman score: 586; 29.2% identity (58.7% similar) in 281 aa overlap (203-482:518-798)
180 190 200 210 220 230
pF1KE3 AKLCKILDKSQALNVTAQQKWPLLRANSSGLYKCELCEFNSKYFSDLKQHMILKHKRTDS
..::..::... . :..:.. :...
CCDS14 IECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP
490 500 510 520 530 540
240 250 260 270 280 290
pF1KE3 NVCRVCKESFSTNMLLIEHAKLHE-EDPYICKYCDYKTVIFENLSQHIADTHFSDHLYWC
..: : ..: : .: ..: : :: :.::.:... ::. :. : .. . :
CCDS14 HICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKC
550 560 570 580 590 600
300 310 320 330 340 350
pF1KE3 EQCDVQFSSSSELYLHFQEHSCDEQYLCQFCEHETNDPEDLHSHVVNEHACKLIELSDKY
. : . ::...:. : :. .. . : :.:.... ::. :... :. . :
CCDS14 DICLLTFSDTKEVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMC
610 620 630 640 650 660
360 370 380 390 400 410
pF1KE3 NNGEHGQYSLLSKITFDKCKNFFVCQVCGFRSRLHTNVNRHVAIEHTKIFPHVCDDCGKG
..: : : .... : :.. :. : :. ..::. ::: .: : : ::
CCDS14 DKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG
670 680 690 700 710 720
420 430 440 450 460 470
pF1KE3 FSSMLEYCKHLNSHLSEGIYLCQYCEYSTGQIEDLKIHLDFKHSADLPHKCSDCLMRFGN
: .. : ::...: .. .: :.:::::: . .: :. :. : ::.: : :
CCDS14 FRQQSELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRR
730 740 750 760 770 780
480
pF1KE3 ERELISHLPVHETT
: .:. :
CCDS14 PSEKNQHIMRHHKEVGLP
790 800
>>CCDS83461.1 ZFX gene_id:7543|Hs108|chrX (844 aa)
initn: 1152 init1: 472 opt: 586 Z-score: 312.9 bits: 68.1 E(32554): 4.2e-11
Smith-Waterman score: 586; 29.2% identity (58.7% similar) in 281 aa overlap (203-482:557-837)
180 190 200 210 220 230
pF1KE3 AKLCKILDKSQALNVTAQQKWPLLRANSSGLYKCELCEFNSKYFSDLKQHMILKHKRTDS
..::..::... . :..:.. :...
CCDS83 IECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP
530 540 550 560 570 580
240 250 260 270 280 290
pF1KE3 NVCRVCKESFSTNMLLIEHAKLHE-EDPYICKYCDYKTVIFENLSQHIADTHFSDHLYWC
..: : ..: : .: ..: : :: :.::.:... ::. :. : .. . :
CCDS83 HICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKC
590 600 610 620 630 640
300 310 320 330 340 350
pF1KE3 EQCDVQFSSSSELYLHFQEHSCDEQYLCQFCEHETNDPEDLHSHVVNEHACKLIELSDKY
. : . ::...:. : :. .. . : :.:.... ::. :... :. . :
CCDS83 DICLLTFSDTKEVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMC
650 660 670 680 690 700
360 370 380 390 400 410
pF1KE3 NNGEHGQYSLLSKITFDKCKNFFVCQVCGFRSRLHTNVNRHVAIEHTKIFPHVCDDCGKG
..: : : .... : :.. :. : :. ..::. ::: .: : : ::
CCDS83 DKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG
710 720 730 740 750 760
420 430 440 450 460 470
pF1KE3 FSSMLEYCKHLNSHLSEGIYLCQYCEYSTGQIEDLKIHLDFKHSADLPHKCSDCLMRFGN
: .. : ::...: .. .: :.:::::: . .: :. :. : ::.: : :
CCDS83 FRQQSELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRR
770 780 790 800 810 820
480
pF1KE3 ERELISHLPVHETT
: .:. :
CCDS83 PSEKNQHIMRHHKEVGLP
830 840
>>CCDS48200.1 ZFY gene_id:7544|Hs108|chrY (610 aa)
initn: 759 init1: 469 opt: 582 Z-score: 312.4 bits: 67.6 E(32554): 4.4e-11
Smith-Waterman score: 582; 29.5% identity (58.7% similar) in 281 aa overlap (203-482:323-603)
180 190 200 210 220 230
pF1KE3 AKLCKILDKSQALNVTAQQKWPLLRANSSGLYKCELCEFNSKYFSDLKQHMILKHKRTDS
..::..::... . :..:.. :...
CCDS48 IECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP
300 310 320 330 340 350
240 250 260 270 280 290
pF1KE3 NVCRVCKESFSTNMLLIEHAKLHE-EDPYICKYCDYKTVIFENLSQHIADTHFSDHLYWC
..: : ..: : .: ..: : :: :.::.:... ::. :: : .. . :
CCDS48 HICVECGKGFRHPSELRKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKC
360 370 380 390 400 410
300 310 320 330 340 350
pF1KE3 EQCDVQFSSSSELYLHFQEHSCDEQYLCQFCEHETNDPEDLHSHVVNEHACKLIELSDKY
. : . ::...:. : :. .. . : :.:.... ::. ::.. :. . .
CCDS48 DICLLTFSDTKEVQQHTLVHQESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMC
420 430 440 450 460 470
360 370 380 390 400 410
pF1KE3 NNGEHGQYSLLSKITFDKCKNFFVCQVCGFRSRLHTNVNRHVAIEHTKIFPHVCDDCGKG
..: : : .... : :.. :. : :. ..::. ::: .: : : ::
CCDS48 EKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG
480 490 500 510 520 530
420 430 440 450 460 470
pF1KE3 FSSMLEYCKHLNSHLSEGIYLCQYCEYSTGQIEDLKIHLDFKHSADLPHKCSDCLMRFGN
: .. : ::...: .. .: :.:::::: . .: :. :. : ::.: : :
CCDS48 FRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRR
540 550 560 570 580 590
480
pF1KE3 ERELISHLPVHETT
: .:. :
CCDS48 PSEKNQHIMRHHKEVGLP
600 610
>>CCDS48201.1 ZFY gene_id:7544|Hs108|chrY (724 aa)
initn: 759 init1: 469 opt: 582 Z-score: 311.6 bits: 67.7 E(32554): 4.9e-11
Smith-Waterman score: 582; 29.5% identity (58.7% similar) in 281 aa overlap (203-482:437-717)
180 190 200 210 220 230
pF1KE3 AKLCKILDKSQALNVTAQQKWPLLRANSSGLYKCELCEFNSKYFSDLKQHMILKHKRTDS
..::..::... . :..:.. :...
CCDS48 IECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP
410 420 430 440 450 460
240 250 260 270 280 290
pF1KE3 NVCRVCKESFSTNMLLIEHAKLHE-EDPYICKYCDYKTVIFENLSQHIADTHFSDHLYWC
..: : ..: : .: ..: : :: :.::.:... ::. :: : .. . :
CCDS48 HICVECGKGFRHPSELRKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKC
470 480 490 500 510 520
300 310 320 330 340 350
pF1KE3 EQCDVQFSSSSELYLHFQEHSCDEQYLCQFCEHETNDPEDLHSHVVNEHACKLIELSDKY
. : . ::...:. : :. .. . : :.:.... ::. ::.. :. . .
CCDS48 DICLLTFSDTKEVQQHTLVHQESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMC
530 540 550 560 570 580
360 370 380 390 400 410
pF1KE3 NNGEHGQYSLLSKITFDKCKNFFVCQVCGFRSRLHTNVNRHVAIEHTKIFPHVCDDCGKG
..: : : .... : :.. :. : :. ..::. ::: .: : : ::
CCDS48 EKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG
590 600 610 620 630 640
420 430 440 450 460 470
pF1KE3 FSSMLEYCKHLNSHLSEGIYLCQYCEYSTGQIEDLKIHLDFKHSADLPHKCSDCLMRFGN
: .. : ::...: .. .: :.:::::: . .: :. :. : ::.: : :
CCDS48 FRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRR
650 660 670 680 690 700
480
pF1KE3 ERELISHLPVHETT
: .:. :
CCDS48 PSEKNQHIMRHHKEVGLP
710 720
>>CCDS14774.1 ZFY gene_id:7544|Hs108|chrY (801 aa)
initn: 759 init1: 469 opt: 582 Z-score: 311.2 bits: 67.7 E(32554): 5.2e-11
Smith-Waterman score: 582; 29.5% identity (58.7% similar) in 281 aa overlap (203-482:514-794)
180 190 200 210 220 230
pF1KE3 AKLCKILDKSQALNVTAQQKWPLLRANSSGLYKCELCEFNSKYFSDLKQHMILKHKRTDS
..::..::... . :..:.. :...
CCDS14 IECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFP
490 500 510 520 530 540
240 250 260 270 280 290
pF1KE3 NVCRVCKESFSTNMLLIEHAKLHE-EDPYICKYCDYKTVIFENLSQHIADTHFSDHLYWC
..: : ..: : .: ..: : :: :.::.:... ::. :: : .. . :
CCDS14 HICVECGKGFRHPSELRKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKC
550 560 570 580 590 600
300 310 320 330 340 350
pF1KE3 EQCDVQFSSSSELYLHFQEHSCDEQYLCQFCEHETNDPEDLHSHVVNEHACKLIELSDKY
. : . ::...:. : :. .. . : :.:.... ::. ::.. :. . .
CCDS14 DICLLTFSDTKEVQQHTLVHQESKTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMC
610 620 630 640 650 660
360 370 380 390 400 410
pF1KE3 NNGEHGQYSLLSKITFDKCKNFFVCQVCGFRSRLHTNVNRHVAIEHTKIFPHVCDDCGKG
..: : : .... : :.. :. : :. ..::. ::: .: : : ::
CCDS14 EKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKG
670 680 690 700 710 720
420 430 440 450 460 470
pF1KE3 FSSMLEYCKHLNSHLSEGIYLCQYCEYSTGQIEDLKIHLDFKHSADLPHKCSDCLMRFGN
: .. : ::...: .. .: :.:::::: . .: :. :. : ::.: : :
CCDS14 FRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRR
730 740 750 760 770 780
480
pF1KE3 ERELISHLPVHETT
: .:. :
CCDS14 PSEKNQHIMRHHKEVGLP
790 800
485 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 17:38:39 2016 done: Sun Nov 6 17:38:39 2016
Total Scan time: 2.650 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]