Result of FASTA (omim) for
pFN21AE3669
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3669, 463 aa
1>>>pF1KE3669 463 - 463 aa - 463 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3929+/-0.00041; mu= 17.7596+/- 0.025
mean_var=74.5962+/-14.885, 0's: 0 Z-trim(112.2): 56 B-trim: 219 in 1/53
Lambda= 0.148496
statistics sampled from 20979 (21035) to 20979 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.247), width: 16
Scan time: 7.010
The best scores are: opt bits E(85289)
NP_001949 (OMIM: 602959,616393,616409) elongation ( 463) 3062 665.7 7.6e-191
NP_001393 (OMIM: 130590) elongation factor 1-alpha ( 462) 2858 621.9 1.1e-177
XP_011533816 (OMIM: 130590) PREDICTED: elongation ( 462) 2858 621.9 1.1e-177
NP_001138630 (OMIM: 612450) HBS1-like protein isof ( 642) 739 168.1 6.4e-41
NP_006611 (OMIM: 612450) HBS1-like protein isoform ( 684) 739 168.1 6.7e-41
NP_001123479 (OMIM: 139259) eukaryotic peptide cha ( 499) 704 160.5 9.5e-39
NP_001123478 (OMIM: 139259) eukaryotic peptide cha ( 636) 704 160.6 1.2e-38
NP_002085 (OMIM: 139259) eukaryotic peptide chain ( 637) 704 160.6 1.2e-38
NP_060564 (OMIM: 300418) eukaryotic peptide chain ( 628) 688 157.1 1.2e-37
XP_011544230 (OMIM: 602389,610678) PREDICTED: elon ( 427) 267 66.8 1.3e-10
NP_003312 (OMIM: 602389,610678) elongation factor ( 455) 267 66.9 1.3e-10
XP_016879108 (OMIM: 602389,610678) PREDICTED: elon ( 455) 267 66.9 1.3e-10
XP_016884592 (OMIM: 602245) PREDICTED: GTP-binding ( 614) 250 63.3 2.1e-09
NP_004277 (OMIM: 602245) GTP-binding protein 1 [Ho ( 669) 250 63.3 2.3e-09
XP_016884589 (OMIM: 602245) PREDICTED: GTP-binding ( 726) 250 63.4 2.4e-09
XP_016884591 (OMIM: 602245) PREDICTED: GTP-binding ( 622) 247 62.7 3.4e-09
XP_016884590 (OMIM: 602245) PREDICTED: GTP-binding ( 684) 247 62.7 3.6e-09
XP_011528839 (OMIM: 602245) PREDICTED: GTP-binding ( 703) 247 62.7 3.7e-09
XP_016884588 (OMIM: 602245) PREDICTED: GTP-binding ( 734) 247 62.7 3.8e-09
NP_001273145 (OMIM: 607434) GTP-binding protein 2 ( 514) 217 56.2 2.5e-07
NP_061969 (OMIM: 607434) GTP-binding protein 2 iso ( 602) 217 56.2 2.8e-07
XP_016862469 (OMIM: 607695) PREDICTED: selenocyste ( 491) 183 48.9 3.7e-05
XP_016862468 (OMIM: 607695) PREDICTED: selenocyste ( 525) 183 48.9 3.9e-05
XP_016862467 (OMIM: 607695) PREDICTED: selenocyste ( 536) 183 48.9 4e-05
XP_016862466 (OMIM: 607695) PREDICTED: selenocyste ( 553) 183 48.9 4.1e-05
XP_016862465 (OMIM: 607695) PREDICTED: selenocyste ( 571) 183 48.9 4.2e-05
XP_016862464 (OMIM: 607695) PREDICTED: selenocyste ( 575) 183 48.9 4.2e-05
NP_068756 (OMIM: 607695) selenocysteine-specific e ( 596) 183 48.9 4.3e-05
XP_016866465 (OMIM: 607434) PREDICTED: GTP-binding ( 493) 175 47.2 0.00012
NP_001406 (OMIM: 300161,300987) eukaryotic transla ( 472) 158 43.5 0.0015
XP_006713858 (OMIM: 606639,609060) PREDICTED: elon ( 712) 159 43.9 0.0018
NP_001295095 (OMIM: 606639,609060) elongation fact ( 591) 147 41.2 0.0091
>>NP_001949 (OMIM: 602959,616393,616409) elongation fact (463 aa)
initn: 3062 init1: 3062 opt: 3062 Z-score: 3547.3 bits: 665.7 E(85289): 7.6e-191
Smith-Waterman score: 3062; 100.0% identity (100.0% similar) in 463 aa overlap (1-463:1-463)
10 20 30 40 50 60
pF1KE3 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 DKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 IGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 EALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 IDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPP
370 380 390 400 410 420
430 440 450 460
pF1KE3 LGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQKAQKAGK
:::::::::::::::::::::::::::::::::::::::::::
NP_001 LGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQKAQKAGK
430 440 450 460
>>NP_001393 (OMIM: 130590) elongation factor 1-alpha 1 [ (462 aa)
initn: 2858 init1: 2858 opt: 2858 Z-score: 3311.1 bits: 621.9 E(85289): 1.1e-177
Smith-Waterman score: 2858; 92.6% identity (97.8% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KE3 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 DKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
::::::::::::::::::::::.:::.:::::::::::::::::::::::::::::::::
NP_001 DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKK
:::::::::::::::::::::::::::::::::::::::: ::.:::.:::::::.::::
NP_001 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 IGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTR
::::: :: :::::::.:::::::: :::::::::: ::.:::::..:::::: ::::::
NP_001 IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTTLLEALDCILPPTR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALS
::::::::::::::::::::::::::::::.:.:::::::::::.:::::::::::::::
NP_001 PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 EALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPV
:::::::::::::::::::.::::: ::::.:::.::: ::.:::::::::::::::.::
NP_001 EALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 IDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPP
.::::::::::::::::::::::::::::.:: :::::::::.:::::::::::::.:::
NP_001 LDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPP
370 380 390 400 410 420
430 440 450 460
pF1KE3 LGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQKAQKAGK
::::::::::::::::::: :.::..:::::::::::::::
NP_001 LGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKAK
430 440 450 460
>>XP_011533816 (OMIM: 130590) PREDICTED: elongation fact (462 aa)
initn: 2858 init1: 2858 opt: 2858 Z-score: 3311.1 bits: 621.9 E(85289): 1.1e-177
Smith-Waterman score: 2858; 92.6% identity (97.8% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KE3 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 DKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
::::::::::::::::::::::.:::.:::::::::::::::::::::::::::::::::
XP_011 DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKK
:::::::::::::::::::::::::::::::::::::::: ::.:::.:::::::.::::
XP_011 GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 IGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTR
::::: :: :::::::.:::::::: :::::::::: ::.:::::..:::::: ::::::
XP_011 IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTTLLEALDCILPPTR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALS
::::::::::::::::::::::::::::::.:.:::::::::::.:::::::::::::::
XP_011 PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 EALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPV
:::::::::::::::::::.::::: ::::.:::.::: ::.:::::::::::::::.::
XP_011 EALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 IDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPP
.::::::::::::::::::::::::::::.:: :::::::::.:::::::::::::.:::
XP_011 LDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPP
370 380 390 400 410 420
430 440 450 460
pF1KE3 LGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQKAQKAGK
::::::::::::::::::: :.::..:::::::::::::::
XP_011 LGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKAK
430 440 450 460
>>NP_001138630 (OMIM: 612450) HBS1-like protein isoform (642 aa)
initn: 939 init1: 632 opt: 739 Z-score: 855.6 bits: 168.1 E(85289): 6.4e-41
Smith-Waterman score: 1079; 39.3% identity (69.3% similar) in 440 aa overlap (5-443:216-642)
10 20 30
pF1KE3 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI
: .:.:::::::.:::: ::..: :.:
NP_001 QSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNI
190 200 210 220 230 240
40 50 60 70 80 90
pF1KE3 DKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPG
.:::..:.:.:. . ::.:: ::::::. :::::.:.:... ::::: ::..::::
NP_001 NKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPG
250 260 270 280 290 300
100 110 120 130 140 150
pF1KE3 HRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNK
:.::: :::::..::: :::.: :. ::::::. .::::::.::. .::: :: :.:::
NP_001 HKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNK
310 320 330 340 350 360
160 170 180 190 200 210
pF1KE3 MDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGW
::... ....:..::. ... ..:. :.. . : :.: :: :.:.. : . : .
NP_001 MDQVN--WQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWY
370 380 390 400 410 420
220 230 240 250 260 270
pF1KE3 KVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRP
: :. ::: .:.. :: : :::.:: ..::.: : : .:..:.: ..
NP_001 K---------GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQT
430 440 450 460 470
280 290 300 310 320 330
pF1KE3 GMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNV-CGDSKSDP
: . : : : ::.. .: : .. : ::.:.... .... : : . :: . :
NP_001 GDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV--P
480 490 500 510 520 530
340 350 360 370 380 390
pF1KE3 PQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKS
. ..: ....:.: :. :. .. .:. . .: ... .:. . .::
NP_001 IKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKF
540 550 560 570 580 590
400 410 420 430 440 450
pF1KE3 LKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTK
: .:. :.::. .:. .: .... :::: .: .:.:.::. ....
NP_001 LTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE
600 610 620 630 640
460
pF1KE3 SAQKAQKAGK
>>NP_006611 (OMIM: 612450) HBS1-like protein isoform 1 [ (684 aa)
initn: 939 init1: 632 opt: 739 Z-score: 855.2 bits: 168.1 E(85289): 6.7e-41
Smith-Waterman score: 1079; 39.3% identity (69.3% similar) in 440 aa overlap (5-443:258-684)
10 20 30
pF1KE3 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI
: .:.:::::::.:::: ::..: :.:
NP_006 QSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNI
230 240 250 260 270 280
40 50 60 70 80 90
pF1KE3 DKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPG
.:::..:.:.:. . ::.:: ::::::. :::::.:.:... ::::: ::..::::
NP_006 NKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPG
290 300 310 320 330 340
100 110 120 130 140 150
pF1KE3 HRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNK
:.::: :::::..::: :::.: :. ::::::. .::::::.::. .::: :: :.:::
NP_006 HKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNK
350 360 370 380 390 400
160 170 180 190 200 210
pF1KE3 MDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGW
::... ....:..::. ... ..:. :.. . : :.: :: :.:.. : . : .
NP_006 MDQVN--WQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWY
410 420 430 440 450 460
220 230 240 250 260 270
pF1KE3 KVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRP
: :. ::: .:.. :: : :::.:: ..::.: : : .:..:.: ..
NP_006 K---------GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQT
470 480 490 500 510
280 290 300 310 320 330
pF1KE3 GMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNV-CGDSKSDP
: . : : : ::.. .: : .. : ::.:.... .... : : . :: . :
NP_006 GDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV--P
520 530 540 550 560 570
340 350 360 370 380 390
pF1KE3 PQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKS
. ..: ....:.: :. :. .. .:. . .: ... .:. . .::
NP_006 IKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKF
580 590 600 610 620 630
400 410 420 430 440 450
pF1KE3 LKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTK
: .:. :.::. .:. .: .... :::: .: .:.:.::. ....
NP_006 LTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE
640 650 660 670 680
460
pF1KE3 SAQKAQKAGK
>>NP_001123479 (OMIM: 139259) eukaryotic peptide chain r (499 aa)
initn: 886 init1: 640 opt: 704 Z-score: 816.7 bits: 160.5 E(85289): 9.5e-39
Smith-Waterman score: 1020; 37.2% identity (67.5% similar) in 443 aa overlap (4-444:71-498)
10 20 30
pF1KE3 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG
.: :.:.: :::::.:::: :...: :
NP_001 RPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
50 60 70 80 90 100
40 50 60 70 80 90
pF1KE3 IDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAP
.::::.::.:.:: : .. .. .:.:: . ::..: :.... ::: : ..::.:::
NP_001 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
110 120 130 140 150 160
100 110 120 130 140 150
pF1KE3 GHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVN
::..:. ::: :.:::: :::...: ::::.:. :.:::::::.:: : :::.::: .:
NP_001 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN
170 180 190 200 210 220
160 170 180 190 200 210
pF1KE3 KMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPAT-VPFVPISGWHGDNMLEPSPNMPWFK
:::. .:..::.: ... ..::.:.:: . :.: :: : :. : : ::.
NP_001 KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWY-
230 240 250 260 270
220 230 240 250 260 270
pF1KE3 GWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGIL
:. .. ::.. .: .: :.:::. : :: .::: .:..:.: .
NP_001 -----------IGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSI
280 290 300 310 320
280 290 300 310 320 330
pF1KE3 RPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSD
:. ... : . ..:: .. . . ::.:. . .:.. ..: : . : ..
NP_001 CKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDP-NN
330 340 350 360 370 380
340 350 360 370 380 390
pF1KE3 PPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPK
. . : .:..:..: . : ::. :. :: ... : .:..::.: . :.
NP_001 LCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPR
390 400 410 420 430 440
400 410 420 430 440 450
pF1KE3 SLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVG-VIKNVEKKSGGAGKV
.:. .. :... . .:.:.:...: .:::..:: .:.:.: :.: : .:
NP_001 FVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
450 460 470 480 490
460
pF1KE3 TKSAQKAQKAGK
>>NP_001123478 (OMIM: 139259) eukaryotic peptide chain r (636 aa)
initn: 886 init1: 640 opt: 704 Z-score: 815.2 bits: 160.6 E(85289): 1.2e-38
Smith-Waterman score: 1020; 37.2% identity (67.5% similar) in 443 aa overlap (4-444:208-635)
10 20 30
pF1KE3 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG
.: :.:.: :::::.:::: :...: :
NP_001 RPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
180 190 200 210 220 230
40 50 60 70 80 90
pF1KE3 IDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAP
.::::.::.:.:: : .. .. .:.:: . ::..: :.... ::: : ..::.:::
NP_001 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
240 250 260 270 280 290
100 110 120 130 140 150
pF1KE3 GHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVN
::..:. ::: :.:::: :::...: ::::.:. :.:::::::.:: : :::.::: .:
NP_001 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN
300 310 320 330 340 350
160 170 180 190 200 210
pF1KE3 KMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPAT-VPFVPISGWHGDNMLEPSPNMPWFK
:::. .:..::.: ... ..::.:.:: . :.: :: : :. : : ::.
NP_001 KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWY-
360 370 380 390 400 410
220 230 240 250 260 270
pF1KE3 GWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGIL
:. .. ::.. .: .: :.:::. : :: .::: .:..:.: .
NP_001 -----------IGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSI
420 430 440 450 460
280 290 300 310 320 330
pF1KE3 RPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSD
:. ... : . ..:: .. . . ::.:. . .:.. ..: : . : ..
NP_001 CKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDP-NN
470 480 490 500 510 520
340 350 360 370 380 390
pF1KE3 PPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPK
. . : .:..:..: . : ::. :. :: ... : .:..::.: . :.
NP_001 LCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPR
530 540 550 560 570 580
400 410 420 430 440 450
pF1KE3 SLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVG-VIKNVEKKSGGAGKV
.:. .. :... . .:.:.:...: .:::..:: .:.:.: :.: : .:
NP_001 FVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
590 600 610 620 630
460
pF1KE3 TKSAQKAQKAGK
>>NP_002085 (OMIM: 139259) eukaryotic peptide chain rele (637 aa)
initn: 886 init1: 640 opt: 704 Z-score: 815.1 bits: 160.6 E(85289): 1.2e-38
Smith-Waterman score: 1020; 37.2% identity (67.5% similar) in 443 aa overlap (4-444:209-636)
10 20 30
pF1KE3 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG
.: :.:.: :::::.:::: :...: :
NP_002 RPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
180 190 200 210 220 230
40 50 60 70 80 90
pF1KE3 IDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAP
.::::.::.:.:: : .. .. .:.:: . ::..: :.... ::: : ..::.:::
NP_002 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
240 250 260 270 280 290
100 110 120 130 140 150
pF1KE3 GHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVN
::..:. ::: :.:::: :::...: ::::.:. :.:::::::.:: : :::.::: .:
NP_002 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN
300 310 320 330 340 350
160 170 180 190 200 210
pF1KE3 KMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPAT-VPFVPISGWHGDNMLEPSPNMPWFK
:::. .:..::.: ... ..::.:.:: . :.: :: : :. : : ::.
NP_002 KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWY-
360 370 380 390 400 410
220 230 240 250 260 270
pF1KE3 GWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGIL
:. .. ::.. .: .: :.:::. : :: .::: .:..:.: .
NP_002 -----------IGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSI
420 430 440 450 460
280 290 300 310 320 330
pF1KE3 RPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSD
:. ... : . ..:: .. . . ::.:. . .:.. ..: : . : ..
NP_002 CKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDP-NN
470 480 490 500 510 520
340 350 360 370 380 390
pF1KE3 PPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPK
. . : .:..:..: . : ::. :. :: ... : .:..::.: . :.
NP_002 LCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPR
530 540 550 560 570 580
400 410 420 430 440 450
pF1KE3 SLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVG-VIKNVEKKSGGAGKV
.:. .. :... . .:.:.:...: .:::..:: .:.:.: :.: : .:
NP_002 FVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
590 600 610 620 630
460
pF1KE3 TKSAQKAQKAGK
>>NP_060564 (OMIM: 300418) eukaryotic peptide chain rele (628 aa)
initn: 834 init1: 588 opt: 688 Z-score: 796.7 bits: 157.1 E(85289): 1.2e-37
Smith-Waterman score: 1010; 36.8% identity (67.0% similar) in 443 aa overlap (4-444:200-627)
10 20 30
pF1KE3 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG
.: :.:.: :::::.:::: :.... :
NP_060 GPPEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGM
170 180 190 200 210 220
40 50 60 70 80 90
pF1KE3 IDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAP
.::::.::.:.:: : .. .. .:.:: . ::..: :.... ::: . ..::.:::
NP_060 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAP
230 240 250 260 270 280
100 110 120 130 140 150
pF1KE3 GHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVN
::..:. ::: :.:::: :::...: ::::.:. :.:::::::.:: : :::.::: .:
NP_060 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN
290 300 310 320 330 340
160 170 180 190 200 210
pF1KE3 KMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPAT-VPFVPISGWHGDNMLEPSPNMPWFK
:::. .: .::.: ... ..::.:..: . :.: :: : :. : : ::.
NP_060 KMDDPTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWY-
350 360 370 380 390 400
220 230 240 250 260 270
pF1KE3 GWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGIL
.:. .. ::.. .: : :.:::. : :: .::: .:..:.: .
NP_060 -----------TGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSI
410 420 430 440 450
280 290 300 310 320 330
pF1KE3 RPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSD
:. ... : . ..:: .. . . ::.:. . .:.. ..: : . : :.
NP_060 FKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDP-SN
460 470 480 490 500 510
340 350 360 370 380 390
pF1KE3 PPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPK
. . : :..:..: . : ::. :. :: ... : .:..::.: . :.
NP_060 LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPR
520 530 540 550 560 570
400 410 420 430 440 450
pF1KE3 SLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVG-VIKNVEKKSGGAGKV
.:. .. :... . .:.:.:...: .:::..:: .:.:.: :.: : .:
NP_060 FVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
580 590 600 610 620
460
pF1KE3 TKSAQKAQKAGK
>>XP_011544230 (OMIM: 602389,610678) PREDICTED: elongati (427 aa)
initn: 511 init1: 191 opt: 267 Z-score: 311.7 bits: 66.8 E(85289): 1.3e-10
Smith-Waterman score: 490; 30.6% identity (53.0% similar) in 447 aa overlap (3-440:56-413)
10 20 30
pF1KE3 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG
..: :.:. .::::: ::.: :. .
XP_011 LLQGLLRLLKAPALPLLCRGLAVEAKKTYVRDKPHVNVGTIGHVDHGKTTLTAAIT----
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE3 GIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDA
: :: : ..:: .:. :: :::::. . .. :. . . :
XP_011 -----------KILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDC
90 100 110 120 130
100 110 120 130 140 150
pF1KE3 PGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGV
::: :..:::::::. : .:.:::. : . ::::: ::: .::....: :
XP_011 PGHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLARQIGVEHVVVYV
140 150 160 170 180
160 170 180 190 200 210
pF1KE3 NKMDSTEPAYSEKRYDEIVK-EVSAYIKKIGYNPATVPFVPISGWHGDNMLEP-SPNMPW
:: : : ..... :.:. :. . ..::. .: . :. :: .:..
XP_011 NKAD----AVQDSEMVELVELEIRELLTEFGYKGEETPVIVGSAL---CALEGRDPEL--
190 200 210 220 230
220 230 240 250 260
pF1KE3 FKGWKVERKEGNASGVSLLEALDTILP-PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVET
: : .: ::.:.:: .: :.: .::. ::.. ::.. : ::: .:
XP_011 --GLKSVQK--------LLDAVDTYIPVPARDLEKPFLLPVEAVYSVPGRGTVVTG----
240 250 260 270 280
270 280 290 300 310 320
pF1KE3 GILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDS
.:: :..: .: :::.: :.... .:.::: :
XP_011 ----------------------IEMFHKSLERAEAGDNLGALVRGLKREDLRRGLVMVKP
290 300 310
330 340 350 360 370 380
pF1KE3 KSDPPQEAAQFTSQVIILN------HPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRS
: :.. .. .:: ::. : .: . ::. : .::.. ::
XP_011 GSIKPHQKVE--AQVYILSKEEGGRHKPFVSH-FMPVMFSLTWDMACRIILPPEKELAMP
320 330 340 350 360 370
390 400 410 420 430 440
pF1KE3 GKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEK
:. :. : .. .:: .:. .: ::..:: .:...:.. :
XP_011 GEDLKFN-------------LILRQPMILEK-GQ-----RFTLRDGNRTIGTGLVTNTLA
380 390 400 410
450 460
pF1KE3 KSGGAGKVTKSAQKAQKAGK
XP_011 MTEEEKNIKWG
420
463 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:35:32 2016 done: Sun Nov 6 23:35:33 2016
Total Scan time: 7.010 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]