Result of FASTA (ccds) for
pFN21AE3658
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3658, 164 aa
1>>>pF1KE3658 164 - 164 aa - 164 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9624+/-0.00059; mu= 13.4615+/- 0.035
mean_var=53.1605+/-10.561, 0's: 0 Z-trim(110.8): 18 B-trim: 0 in 0/49
Lambda= 0.175906
statistics sampled from 11848 (11861) to 11848 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.364), width: 16
Scan time: 1.760
The best scores are: opt bits E(32554)
CCDS41662.1 RARRES3 gene_id:5920|Hs108|chr11 ( 164) 1095 285.1 1.4e-77
CCDS8047.1 PLA2G16 gene_id:11145|Hs108|chr11 ( 162) 543 145.0 2e-35
CCDS8046.1 HRASLS2 gene_id:54979|Hs108|chr11 ( 162) 527 140.9 3.3e-34
CCDS53646.1 HRASLS5 gene_id:117245|Hs108|chr11 ( 269) 497 133.4 1e-31
CCDS8044.1 HRASLS5 gene_id:117245|Hs108|chr11 ( 279) 497 133.4 1e-31
CCDS3303.2 HRASLS gene_id:57110|Hs108|chr3 ( 273) 450 121.5 4e-28
CCDS53647.1 HRASLS5 gene_id:117245|Hs108|chr11 ( 253) 405 110.0 1e-24
>>CCDS41662.1 RARRES3 gene_id:5920|Hs108|chr11 (164 aa)
initn: 1095 init1: 1095 opt: 1095 Z-score: 1506.5 bits: 285.1 E(32554): 1.4e-77
Smith-Waterman score: 1095; 100.0% identity (100.0% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KE3 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL
70 80 90 100 110 120
130 140 150 160
pF1KE3 RYGKSRCKQVEKAKVEVGVATALGILVVAGCSFAIRRYQKKATA
::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RYGKSRCKQVEKAKVEVGVATALGILVVAGCSFAIRRYQKKATA
130 140 150 160
>>CCDS8047.1 PLA2G16 gene_id:11145|Hs108|chr11 (162 aa)
initn: 514 init1: 514 opt: 543 Z-score: 749.5 bits: 145.0 E(32554): 2e-35
Smith-Waterman score: 543; 51.2% identity (77.8% similar) in 162 aa overlap (1-161:1-162)
10 20 30 40 50 60
pF1KE3 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV
: .: :::::::::::: :.:::.:.:::::.::::::: :::..::.:.:...: :
CCDS80 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL
:.: : ::.:. :.:::. : .:.: : ::. :.:.:::.. :...:.::::::..:
CCDS80 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL
70 80 90 100 110 120
130 140 150 160
pF1KE3 RYGKSRCKQVEKAKVEVGVA-TALGILVVAGCSFAIRRYQKKATA
::: .: ::. . . ..:: .:. . . : :. . ::.
CCDS80 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ
130 140 150 160
>>CCDS8046.1 HRASLS2 gene_id:54979|Hs108|chr11 (162 aa)
initn: 540 init1: 526 opt: 527 Z-score: 727.6 bits: 140.9 E(32554): 3.3e-34
Smith-Waterman score: 527; 55.7% identity (77.9% similar) in 149 aa overlap (1-149:1-147)
10 20 30 40 50 60
pF1KE3 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV
:: . .:. :::::: :.:: :::.:.:::::.:::: :: :::..::.:.:.:.: :
CCDS80 MALARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL
:.: : :.:: :::::. : .: : : . :.. :.:.:::.. ::..: ::::::..:
CCDS80 KKELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHL
70 80 90 100 110 120
130 140 150 160
pF1KE3 RYGKSRCKQVEKAKVEVGVATALGILVVAGCSFAIRRYQKKATA
::: :: :: : . ::::. :.:..:
CCDS80 RYGVSRSDQVTGAVTTVGVAA--GLLAAASLVGILLARSKRERQ
130 140 150 160
>>CCDS53646.1 HRASLS5 gene_id:117245|Hs108|chr11 (269 aa)
initn: 479 init1: 284 opt: 497 Z-score: 683.0 bits: 133.4 E(32554): 1e-31
Smith-Waterman score: 497; 53.4% identity (74.3% similar) in 148 aa overlap (2-149:114-257)
10 20 30
pF1KE3 MASPHQEPKPGDLIEIFRLGYEHWALYIGDG
: . .:.:::::::::.::::::.:. :
CCDS53 VVSLETTPSQKADWSSIPKPENEGKLIKQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDD
90 100 110 120 130 140
40 50 60 70 80 90
pF1KE3 YVIHLAPPSEYPGAGSSSVFSVLSNSAEVKRERLEDVVGGCCYRVNNSLDHEYQPRPVEV
:.::::::: .:: . :..:: : :: :::::. :: ..:::.:: : : ::.
CCDS53 CVVHLAPPSEEFEVGS--ITSIFSNRAVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDK
150 160 170 180 190 200
100 110 120 130 140 150
pF1KE3 IISSAKEMVGQKMKYSIVSRNCEHFVTQLRYGKSRCKQVEKAKVEVGVATALGILVVAGC
::. .:.::.. ..::.. ::::::. :::: : .:::.: .: : : : : .. :
CCDS53 IIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALME-G-AKAAGAVISAVV
210 220 230 240 250
160
pF1KE3 SFAIRRYQKKATA
CCDS53 DSIKPKPITA
260
>>CCDS8044.1 HRASLS5 gene_id:117245|Hs108|chr11 (279 aa)
initn: 479 init1: 284 opt: 497 Z-score: 682.7 bits: 133.4 E(32554): 1e-31
Smith-Waterman score: 497; 53.4% identity (74.3% similar) in 148 aa overlap (2-149:124-267)
10 20 30
pF1KE3 MASPHQEPKPGDLIEIFRLGYEHWALYIGDG
: . .:.:::::::::.::::::.:. :
CCDS80 VVSLETTPSQKADWSSIPKPENEGKLIKQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDD
100 110 120 130 140 150
40 50 60 70 80 90
pF1KE3 YVIHLAPPSEYPGAGSSSVFSVLSNSAEVKRERLEDVVGGCCYRVNNSLDHEYQPRPVEV
:.::::::: .:: . :..:: : :: :::::. :: ..:::.:: : : ::.
CCDS80 CVVHLAPPSEEFEVGS--ITSIFSNRAVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDK
160 170 180 190 200 210
100 110 120 130 140 150
pF1KE3 IISSAKEMVGQKMKYSIVSRNCEHFVTQLRYGKSRCKQVEKAKVEVGVATALGILVVAGC
::. .:.::.. ..::.. ::::::. :::: : .:::.: .: : : : : .. :
CCDS80 IIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALME-G-AKAAGAVISAVV
220 230 240 250 260
160
pF1KE3 SFAIRRYQKKATA
CCDS80 DSIKPKPITA
270
>>CCDS3303.2 HRASLS gene_id:57110|Hs108|chr3 (273 aa)
initn: 460 init1: 266 opt: 450 Z-score: 618.4 bits: 121.5 E(32554): 4e-28
Smith-Waterman score: 450; 49.3% identity (76.4% similar) in 144 aa overlap (8-150:120-262)
10 20 30
pF1KE3 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLA
: ::::::.:: ::.:::::.::::::..:
CCDS33 TQLPPGARRRPRLESEMAFNDCFSLNYPGNPCPGDLIEVFRPGYQHWALYLGDGYVINIA
90 100 110 120 130 140
40 50 60 70 80 90
pF1KE3 PPSEYPGAGSSSVFSVLSNSAEVKRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAK
: . : :. .:. ::.:..: :: . :.::::. ::.::. :. : : ::: ::. ..
CCDS33 PVDGIP-ASFTSAKSVFSSKALVKMQLLKDVVGNDTYRINNKYDETYPPLPVEEIIKRSE
150 160 170 180 190 200
100 110 120 130 140 150
pF1KE3 EMVGQKMKYSIVSRNCEHFVTQLRYGKSRCKQVEKAKVEVG-VATALGILVVAGCSFAIR
..::.. :... ::::::: ::::.. .:...: : :..:.:.. :
CCDS33 FVIGQEVAYNLLVNNCEHFVTLLRYGEGVSEQANRAISTVEFVTAAVGVFSFLGLFPKGQ
210 220 230 240 250 260
160
pF1KE3 RYQKKATA
CCDS33 RAKYY
270
>>CCDS53647.1 HRASLS5 gene_id:117245|Hs108|chr11 (253 aa)
initn: 225 init1: 215 opt: 405 Z-score: 557.2 bits: 110.0 E(32554): 1e-24
Smith-Waterman score: 405; 53.6% identity (75.9% similar) in 112 aa overlap (2-113:124-233)
10 20 30
pF1KE3 MASPHQEPKPGDLIEIFRLGYEHWALYIGDG
: . .:.:::::::::.::::::.:. :
CCDS53 VVSLETTPSQKADWSSIPKPENEGKLIKQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDD
100 110 120 130 140 150
40 50 60 70 80 90
pF1KE3 YVIHLAPPSEYPGAGSSSVFSVLSNSAEVKRERLEDVVGGCCYRVNNSLDHEYQPRPVEV
:.::::::: .: :. :..:: : :: :::::. :: ..:::.:: : : ::.
CCDS53 CVVHLAPPSEEFEVG--SITSIFSNRAVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDK
160 170 180 190 200 210
100 110 120 130 140 150
pF1KE3 IISSAKEMVGQKMKYSIVSRNCEHFVTQLRYGKSRCKQVEKAKVEVGVATALGILVVAGC
::. .:.::.. ..::.. ::
CCDS53 IIQRTKKMVNKIVQYSLIEGNCRARPDGRSEGCWSSYFSCSG
220 230 240 250
164 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:03:01 2016 done: Mon Nov 7 02:03:01 2016
Total Scan time: 1.760 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]