FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3657, 414 aa
  1>>>pF1KE3657 414 - 414 aa - 414 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5033+/-0.000924; mu= 16.1633+/- 0.055
 mean_var=67.5170+/-12.996, 0's: 0 Z-trim(105.3): 14  B-trim: 6 in 1/49
 Lambda= 0.156087
 statistics sampled from 8352 (8357) to 8352 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.257), width:  16
 Scan time:  2.110

The best scores are:                                      opt bits E(32554)
CCDS9907.1 ITPK1 gene_id:3705|Hs108|chr14          ( 414) 2732 624.3 6.6e-179
CCDS45157.1 ITPK1 gene_id:3705|Hs108|chr14         ( 314) 1970 452.6 2.3e-127


>>CCDS9907.1 ITPK1 gene_id:3705|Hs108|chr14               (414 aa)
 initn: 2732 init1: 2732 opt: 2732  Z-score: 3325.4  bits: 624.3 E(32554): 6.6e-179
Smith-Waterman score: 2732; 100.0% identity (100.0% similar) in 414 aa overlap (1-414:1-414)

               10        20        30        40        50        60
pF1KE3 MQTFLKGKRVGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 MQTFLKGKRVGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 TDVILEADQNDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 TDVILEADQNDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 EDDRICSPPFMELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 EDDRICSPPFMELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 IQPPCVVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 IQPPCVVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPES
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 SSVLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIINNQTGQHAVIDINAFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 SSVLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIINNQTGQHAVIDINAFP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 GYEGVSEFFTDLLNHIATVLQGQSTAMAATGDVALLRHSKLLAEPAGGLVGERTCSASPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 GYEGVSEFFTDLLNHIATVLQGQSTAMAATGDVALLRHSKLLAEPAGGLVGERTCSASPG
              310       320       330       340       350       360

              370       380       390       400       410    
pF1KE3 CCGSMMGQDAPWKAEADAGGTAKLPHQRLGCNAGVSPSFQQHCVASLATKASSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 CCGSMMGQDAPWKAEADAGGTAKLPHQRLGCNAGVSPSFQQHCVASLATKASSQ
              370       380       390       400       410    

>>CCDS45157.1 ITPK1 gene_id:3705|Hs108|chr14              (314 aa)
 initn: 1970 init1: 1970 opt: 1970  Z-score: 2399.9  bits: 452.6 E(32554): 2.3e-127
Smith-Waterman score: 1970; 100.0% identity (100.0% similar) in 301 aa overlap (1-301:1-301)

               10        20        30        40        50        60
pF1KE3 MQTFLKGKRVGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MQTFLKGKRVGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 TDVILEADQNDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TDVILEADQNDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 EDDRICSPPFMELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EDDRICSPPFMELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 IQPPCVVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IQPPCVVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPES
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 SSVLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIINNQTGQHAVIDINAFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SSVLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIINNQTGQHAVIDINAFP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 GYEGVSEFFTDLLNHIATVLQGQSTAMAATGDVALLRHSKLLAEPAGGLVGERTCSASPG
       :                                                           
CCDS45 GDCQVCFIEGWKTD                                              
              310                                                  




414 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 20:23:01 2016 done: Sun Nov  6 20:23:01 2016
 Total Scan time:  2.110 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]