Result of FASTA (omim) for
pFN21AE3621
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3621, 216 aa
1>>>pF1KE3621 216 - 216 aa - 216 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0749+/-0.000469; mu= 15.5260+/- 0.030
mean_var=96.8321+/-20.095, 0's: 0 Z-trim(111.3): 454 B-trim: 0 in 0/49
Lambda= 0.130336
statistics sampled from 19284 (19801) to 19284 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.6), E-opt: 0.2 (0.232), width: 16
Scan time: 5.880
The best scores are: opt bits E(85289)
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 1393 272.3 4.2e-73
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 1260 247.3 1.4e-65
NP_001193765 (OMIM: 605570) ras-related protein Ra ( 155) 936 186.2 2.5e-47
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 826 165.7 5.1e-41
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 612 125.5 6.7e-29
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 605 124.1 1.6e-28
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 604 124.0 1.9e-28
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 601 123.4 2.8e-28
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 599 123.0 3.5e-28
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 593 121.9 7.8e-28
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 580 119.4 4.2e-27
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 567 117.0 2.3e-26
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 564 116.4 3.3e-26
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 564 116.5 3.5e-26
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 557 115.1 8.4e-26
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 554 114.6 1.3e-25
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 531 110.2 2.5e-24
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213) 524 108.9 6.4e-24
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 519 108.1 1.3e-23
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 510 106.3 4e-23
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 507 105.8 6.6e-23
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 504 105.1 8.4e-23
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 504 105.1 8.4e-23
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 504 105.1 8.4e-23
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 504 105.1 8.4e-23
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 503 105.0 1e-22
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 503 105.0 1e-22
XP_016873867 (OMIM: 612565) PREDICTED: ras-related ( 237) 501 104.7 1.4e-22
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 499 104.2 1.7e-22
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 499 104.2 1.7e-22
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 498 104.1 2e-22
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 498 104.1 2e-22
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 496 103.7 2.5e-22
NP_001229573 (OMIM: 179509) ras-related protein Ra ( 188) 488 102.1 6.4e-22
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 488 102.2 7e-22
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 488 102.2 7e-22
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 488 102.2 7e-22
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 488 102.2 7e-22
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 488 102.2 7.7e-22
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 487 102.0 8e-22
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 483 101.2 1.3e-21
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 483 101.2 1.3e-21
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 483 101.2 1.3e-21
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 483 101.2 1.3e-21
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 479 100.4 2.2e-21
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 479 100.5 2.3e-21
NP_006859 (OMIM: 605694) ras-related protein Rab-3 ( 195) 473 99.3 4.6e-21
NP_001182257 (OMIM: 300284) ras-related protein Ra ( 201) 472 99.1 5.4e-21
XP_016885453 (OMIM: 300284) PREDICTED: ras-related ( 201) 472 99.1 5.4e-21
NP_004242 (OMIM: 300284) ras-related protein Rab-9 ( 201) 472 99.1 5.4e-21
>>NP_004654 (OMIM: 605570) ras-related protein Rab-11A i (216 aa)
initn: 1393 init1: 1393 opt: 1393 Z-score: 1433.5 bits: 272.3 E(85289): 4.2e-73
Smith-Waterman score: 1393; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
130 140 150 160 170 180
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
::::::::::::::::::::::::::::::::::::
NP_004 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
190 200 210
>>NP_004209 (OMIM: 604198) ras-related protein Rab-11B [ (218 aa)
initn: 1249 init1: 1214 opt: 1260 Z-score: 1298.3 bits: 247.3 E(85289): 1.4e-65
Smith-Waterman score: 1260; 91.3% identity (96.3% similar) in 218 aa overlap (1-216:1-218)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
::::::::::::::::::::::::::.::::::::::::::: ::..:::::::::::::
NP_004 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
130 140 150 160 170 180
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTEN-KP-KVQCCQNI
..:: .: ::.:::: : :::::.. :: :.:::::.
NP_004 IADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
190 200 210
>>NP_001193765 (OMIM: 605570) ras-related protein Rab-11 (155 aa)
initn: 936 init1: 936 opt: 936 Z-score: 970.8 bits: 186.2 E(85289): 2.5e-47
Smith-Waterman score: 936; 100.0% identity (100.0% similar) in 146 aa overlap (1-146:1-146)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
::::::::::::::::::::::::::
NP_001 LVGNKSDLRHLRAVPTDEARAFAEKNEANVRQTRK
130 140 150
>>NP_065120 (OMIM: 612942) ras-related protein Rab-25 pr (213 aa)
initn: 800 init1: 800 opt: 826 Z-score: 857.4 bits: 165.7 E(85289): 5.1e-41
Smith-Waterman score: 826; 67.2% identity (88.4% similar) in 189 aa overlap (2-190:4-191)
10 20 30 40 50
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK
::..: :...:::::::.:::::.:::::::::::. .:..::::::.::....
NP_065 MGNGTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTA
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIV
..::::::::: ::::::::::::::::::::.:..:: :: :::::::: :::...::
NP_065 AVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 IMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ
.::::::::: . : :::.::: :::.::: :.::::::::::: ::.:.: ::. ::.
NP_065 VMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSK
120 130 140 150 160 170
180 190 200 210
pF1KE3 KQMSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
..... : : ..
NP_065 QRQNSIRTNAITLGSAQAGQEPGPGEKRACCISL
180 190 200 210
>>NP_116235 (OMIM: 607466) ras-related protein Rab-2B is (216 aa)
initn: 628 init1: 605 opt: 612 Z-score: 639.8 bits: 125.5 E(85289): 6.7e-29
Smith-Waterman score: 612; 48.8% identity (76.4% similar) in 203 aa overlap (8-207:3-204)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
: :::: ..:::.::::: :: .:: ..:. ::::::..: ...::: :
NP_116 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQI
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::: .:.:: .:::::.::::::::... :.... ::.. :.:..::.:::
NP_116 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
:.::::::. : : .:..:::...:: :.:::: . ::: :: . :::: ..:
NP_116 LIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGL
120 130 140 150 160 170
190 200 210
pF1KE3 MSDRREND---MSPSNNVVPIHVPPTTENKPKVQCCQNI
.. . : . ..:.... : :.. ..
NP_116 FDVHNEANGIKIGPQQSI-STSVGPSASQRNSRDIGSNSGCC
180 190 200 210
>>NP_112243 (OMIM: 612565) ras-related protein Rab-1B [H (201 aa)
initn: 602 init1: 602 opt: 605 Z-score: 633.1 bits: 124.1 E(85289): 1.6e-28
Smith-Waterman score: 605; 51.0% identity (74.7% similar) in 194 aa overlap (5-197:2-195)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
. :::::::..:::::::::: :: ::. . .. :::::.: :.:..:::::
NP_112 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.:.:::.::::: : ..:::.. . .: ::..::.:. .:. :. .
NP_112 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
:::::::: ..: . :. ::.. :. :.:::: ..:::: ::.:. .:: . ..
NP_112 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA
120 130 140 150 160 170
190 200 210
pF1KE3 MSD-RRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
: .: : :. : :
NP_112 ASGGERPNLKIDSTPVKPAGGGCC
180 190 200
>>NP_002856 (OMIM: 179509) ras-related protein Rab-2A is (212 aa)
initn: 621 init1: 598 opt: 604 Z-score: 631.8 bits: 124.0 E(85289): 1.9e-28
Smith-Waterman score: 604; 55.0% identity (80.1% similar) in 171 aa overlap (8-178:3-173)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
: :::: ..:::.::::: :: .:: ..:. ::::::..: : .::: :
NP_002 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQI
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::: .:.:: .:::::.::::::::... :.... ::.. :.:..::.:::
NP_002 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
:.::::::. : : .:..:::...:: :.:::: ..::: :: . :::. ...
NP_002 LIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV
120 130 140 150 160 170
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
NP_002 FDINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC
180 190 200 210
>>NP_057406 (OMIM: 612673) ras-related protein Rab-14 [H (215 aa)
initn: 586 init1: 568 opt: 601 Z-score: 628.7 bits: 123.4 E(85289): 2.8e-28
Smith-Waterman score: 601; 45.5% identity (71.8% similar) in 213 aa overlap (1-213:1-213)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
:.: .:.:.:: ..::: ::::: :: .::...: . ::::::.:: :.:.:. :
NP_057 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.::.: .:::::.:::.::::... ::... :: . :. .. : ::.
NP_057 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
:.:::.::. : : .::. :::.::: :.:.:: . ::: :: .::. ... .
NP_057 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
130 140 150 160 170 180
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
.. .. . .: :.: .:. . :
NP_057 LDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
190 200 210
>>NP_004152 (OMIM: 179508) ras-related protein Rab-1A is (205 aa)
initn: 587 init1: 587 opt: 599 Z-score: 626.9 bits: 123.0 E(85289): 3.5e-28
Smith-Waterman score: 599; 46.5% identity (72.3% similar) in 213 aa overlap (1-213:1-205)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
:.. . :::::::..:::::::::: :: ::. . .. :::::.: :.:..:::::
NP_004 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.:.:::.::::: : ..:::.. . ...::..::.:. .:. :. .
NP_004 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
::::: :: ..: :. ::.. :. :.:::: ..:::: .:.:. .:: .:.
NP_004 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKR
130 140 150 160 170
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
:. . ..:: :. :. .. ::
NP_004 MGPGATAGGAEKSNV-KIQSTPVKQSGGG--CC
180 190 200
>>NP_057614 (OMIM: 613532) ras-related protein Rab-8B [H (207 aa)
initn: 607 init1: 585 opt: 593 Z-score: 620.7 bits: 121.9 E(85289): 7.8e-28
Smith-Waterman score: 598; 46.0% identity (75.2% similar) in 202 aa overlap (8-209:5-197)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::..:::::::::. :: ::... :: ::::..: :.:..::: :
NP_057 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.:.::.::::::.: .:::::... ...:.. :......::.:.. :
NP_057 KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
..::: :. : : .... .: :..:.:::: .:.::: :: :. .:. .
NP_057 ILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKL----
120 130 140 150 160 170
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
.:. :: . .. :... :::. :
NP_057 --NRKMNDSNSAGAGGPVKI---TENRSKKTSFFRCSLL
180 190 200
216 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:32:41 2016 done: Mon Nov 7 01:32:43 2016
Total Scan time: 5.880 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]