Result of FASTA (ccds) for
pFN21AE3618
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3618, 298 aa
1>>>pF1KE3618 298 - 298 aa - 298 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2777+/-0.000689; mu= 13.2150+/- 0.042
mean_var=139.2963+/-29.159, 0's: 0 Z-trim(115.6): 66 B-trim: 630 in 1/52
Lambda= 0.108669
statistics sampled from 16126 (16199) to 16126 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.823), E-opt: 0.2 (0.498), width: 16
Scan time: 2.730
The best scores are: opt bits E(32554)
CCDS13513.1 BIRC7 gene_id:79444|Hs108|chr20 ( 298) 2163 349.7 1.5e-96
CCDS13512.1 BIRC7 gene_id:79444|Hs108|chr20 ( 280) 1589 259.7 1.8e-69
CCDS8315.1 BIRC3 gene_id:330|Hs108|chr11 ( 604) 389 71.9 1.3e-12
CCDS58169.1 BIRC2 gene_id:329|Hs108|chr11 ( 569) 384 71.1 2.2e-12
CCDS8316.1 BIRC2 gene_id:329|Hs108|chr11 ( 618) 384 71.1 2.3e-12
>>CCDS13513.1 BIRC7 gene_id:79444|Hs108|chr20 (298 aa)
initn: 2163 init1: 2163 opt: 2163 Z-score: 1846.6 bits: 349.7 E(32554): 1.5e-96
Smith-Waterman score: 2163; 99.7% identity (100.0% similar) in 298 aa overlap (1-298:1-298)
10 20 30 40 50 60
pF1KE3 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVE
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
CCDS13 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAEAQRAWWVLEPPGARDVE
190 200 210 220 230 240
250 260 270 280 290
pF1KE3 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
250 260 270 280 290
>>CCDS13512.1 BIRC7 gene_id:79444|Hs108|chr20 (280 aa)
initn: 1587 init1: 1587 opt: 1589 Z-score: 1360.6 bits: 259.7 E(32554): 1.8e-69
Smith-Waterman score: 1984; 94.0% identity (94.0% similar) in 298 aa overlap (1-298:1-280)
10 20 30 40 50 60
pF1KE3 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVE
::::::::::::::::::::::::::::::::::::: :::::
CCDS13 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPG------------------ARDVE
190 200 210 220
250 260 270 280 290
pF1KE3 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
230 240 250 260 270 280
>>CCDS8315.1 BIRC3 gene_id:330|Hs108|chr11 (604 aa)
initn: 617 init1: 380 opt: 389 Z-score: 339.8 bits: 71.9 E(32554): 1.3e-12
Smith-Waterman score: 389; 39.4% identity (71.2% similar) in 132 aa overlap (48-174:215-342)
20 30 40 50 60 70
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR-----PLTEEEEEEGAG
:. :. . .:: :. :.. .. .
CCDS83 SPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRHFPKCPFIENQLQDTSR
190 200 210 220 230 240
80 90 100 110 120 130
pF1KE3 ATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQ
:.: .: .. :. .:..:: .. : :: ::.:::...:..: :.:: : :::.
CCDS83 YTVSNL----SMQTHAARFKTFFNWPSSVLVNPEQLASAGFYYVGNSDDVKCFCCDGGLR
250 260 270 280 290 300
140 150 160 170 180 190
pF1KE3 SWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPWEEPEDAAPVAPS
:. :::::..:::::: :..:.: ::..:...:: .. .::
CCDS83 CWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHLLEQLLSTSDSPGDENAESS
310 320 330 340 350 360
200 210 220 230 240 250
pF1KE3 VPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTC
CCDS83 IIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQRKILATGENYRLVNDLVLDL
370 380 390 400 410 420
>>CCDS58169.1 BIRC2 gene_id:329|Hs108|chr11 (569 aa)
initn: 562 init1: 376 opt: 384 Z-score: 335.9 bits: 71.1 E(32554): 2.2e-12
Smith-Waterman score: 384; 36.9% identity (61.8% similar) in 157 aa overlap (48-200:181-337)
20 30 40 50 60 70
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLRPLTEEEEEEGAGATLSR
:. : . . : . . :.. ::
CCDS58 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
160 170 180 190 200 210
80 90 100 110 120 130
pF1KE3 GPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRG
. . .: .. :. .:. :: .. : :: ::.:::...:..: :.:: : :::. :. :
CCDS58 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
220 230 240 250 260 270
140 150 160 170 180 190
pF1KE3 DDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHS----QLLGSWDPWEEPEDAAPVAPSV
::::.::::::: :.::.: ::..:: .: . :::.. : : . :.
CCDS58 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
280 290 300 310 320 330
200 210 220 230 240 250
pF1KE3 PASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCK
:. . :
CCDS58 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
340 350 360 370 380 390
>>CCDS8316.1 BIRC2 gene_id:329|Hs108|chr11 (618 aa)
initn: 562 init1: 376 opt: 384 Z-score: 335.4 bits: 71.1 E(32554): 2.3e-12
Smith-Waterman score: 384; 36.9% identity (61.8% similar) in 157 aa overlap (48-200:230-386)
20 30 40 50 60 70
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLRPLTEEEEEEGAGATLSR
:. : . . : . . :.. ::
CCDS83 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
200 210 220 230 240 250
80 90 100 110 120 130
pF1KE3 GPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRG
. . .: .. :. .:. :: .. : :: ::.:::...:..: :.:: : :::. :. :
CCDS83 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
260 270 280 290 300 310
140 150 160 170 180 190
pF1KE3 DDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHS----QLLGSWDPWEEPEDAAPVAPSV
::::.::::::: :.::.: ::..:: .: . :::.. : : . :.
CCDS83 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
320 330 340 350 360 370
200 210 220 230 240 250
pF1KE3 PASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCK
:. . :
CCDS83 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
380 390 400 410 420 430
298 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:57:07 2016 done: Sun Nov 6 22:57:08 2016
Total Scan time: 2.730 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]