Result of FASTA (ccds) for
pFN21AE3616
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3616, 478 aa
1>>>pF1KE3616 478 - 478 aa - 478 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1286+/-0.00101; mu= 9.5213+/- 0.061
mean_var=110.3712+/-21.509, 0's: 0 Z-trim(106.9): 30 B-trim: 3 in 1/50
Lambda= 0.122081
statistics sampled from 9232 (9245) to 9232 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.654), E-opt: 0.2 (0.284), width: 16
Scan time: 3.020
The best scores are: opt bits E(32554)
CCDS46281.1 GTF2A1L gene_id:11036|Hs108|chr2 ( 478) 3148 565.5 4.5e-161
CCDS1840.1 GTF2A1L gene_id:286749|Hs108|chr2 (1182) 3114 559.7 6.2e-159
CCDS54359.1 GTF2A1L gene_id:11036|Hs108|chr2 ( 444) 2884 519.0 4.1e-147
CCDS56118.1 GTF2A1L gene_id:286749|Hs108|chr2 (1158) 2856 514.2 2.9e-145
CCDS56119.1 GTF2A1L gene_id:286749|Hs108|chr2 (1135) 2348 424.7 2.5e-118
CCDS9874.1 GTF2A1 gene_id:2957|Hs108|chr14 ( 337) 412 83.5 3.8e-16
CCDS9873.1 GTF2A1 gene_id:2957|Hs108|chr14 ( 376) 412 83.5 4.1e-16
>>CCDS46281.1 GTF2A1L gene_id:11036|Hs108|chr2 (478 aa)
initn: 3148 init1: 3148 opt: 3148 Z-score: 3005.3 bits: 565.5 E(32554): 4.5e-161
Smith-Waterman score: 3148; 100.0% identity (100.0% similar) in 478 aa overlap (1-478:1-478)
10 20 30 40 50 60
pF1KE3 MACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 IQSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 IQSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 AGVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AGVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 YISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 YISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 NRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 IGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 IGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGD
370 380 390 400 410 420
430 440 450 460 470
pF1KE3 DVSEQDVPDLFDTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDYVFAKAIGDAEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DVSEQDVPDLFDTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDYVFAKAIGDAEW
430 440 450 460 470
>>CCDS1840.1 GTF2A1L gene_id:286749|Hs108|chr2 (1182 aa)
initn: 3114 init1: 3114 opt: 3114 Z-score: 2966.8 bits: 559.7 E(32554): 6.2e-159
Smith-Waterman score: 3114; 99.4% identity (99.4% similar) in 477 aa overlap (2-478:706-1182)
10 20 30
pF1KE3 MACLNPVPKLYRSVIEDVIEGVRNLFAEEGI
:: : ::::::::::::::::::::::::
CCDS18 SVPDTCASRTEVRSLGVESDVQPQKHVQQRACYNIQPKLYRSVIEDVIEGVRNLFAEEGI
680 690 700 710 720 730
40 50 60 70 80 90
pF1KE3 EEQVLKDLKQLWETKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSSTASLVIPAGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 EEQVLKDLKQLWETKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSSTASLVIPAGR
740 750 760 770 780 790
100 110 120 130 140 150
pF1KE3 TLPSFTTAELGTSNSSANFTFPGYPIHVPAGVTLQTVSGHLYKVNVPIMVTETSGRAGIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 TLPSFTTAELGTSNSSANFTFPGYPIHVPAGVTLQTVSGHLYKVNVPIMVTETSGRAGIL
800 810 820 830 840 850
160 170 180 190 200 210
pF1KE3 QHPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 QHPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLE
860 870 880 890 900 910
220 230 240 250 260 270
pF1KE3 NATSDILVSPGNEHKIVPEALLCHQESSHYISLPGVVFSPQVSQTNSNVESVLSGSASMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 NATSDILVSPGNEHKIVPEALLCHQESSHYISLPGVVFSPQVSQTNSNVESVLSGSASMA
920 930 940 950 960 970
280 290 300 310 320 330
pF1KE3 QNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 QNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQ
980 990 1000 1010 1020 1030
340 350 360 370 380 390
pF1KE3 VDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 VDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSI
1040 1050 1060 1070 1080 1090
400 410 420 430 440 450
pF1KE3 SNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYDKIHRSKNKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 SNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYDKIHRSKNKW
1100 1110 1120 1130 1140 1150
460 470
pF1KE3 KFYLKDGVMCFGGRDYVFAKAIGDAEW
:::::::::::::::::::::::::::
CCDS18 KFYLKDGVMCFGGRDYVFAKAIGDAEW
1160 1170 1180
>>CCDS54359.1 GTF2A1L gene_id:11036|Hs108|chr2 (444 aa)
initn: 2922 init1: 2884 opt: 2884 Z-score: 2754.5 bits: 519.0 E(32554): 4.1e-147
Smith-Waterman score: 2884; 100.0% identity (100.0% similar) in 437 aa overlap (42-478:8-444)
20 30 40 50 60 70
pF1KE3 RSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFFRNSIQSPLFTLQLP
::::::::::::::::::::::::::::::
CCDS54 MACLNPVLWETKVLQSKATEDFFRNSIQSPLFTLQLP
10 20 30
80 90 100 110 120 130
pF1KE3 HSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVPAGVTLQTVSGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 HSLHQTLQSSTASLVIPAGRTLPSFTTAELGTSNSSANFTFPGYPIHVPAGVTLQTVSGH
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE3 LYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIE
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE3 TVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSHYISLPGVVFSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSHYISLPGVVFSP
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE3 QVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQ
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE3 PRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENE
280 290 300 310 320 330
380 390 400 410 420 430
pF1KE3 FLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLF
340 350 360 370 380 390
440 450 460 470
pF1KE3 DTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDYVFAKAIGDAEW
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDYVFAKAIGDAEW
400 410 420 430 440
>>CCDS56118.1 GTF2A1L gene_id:286749|Hs108|chr2 (1158 aa)
initn: 2856 init1: 2856 opt: 2856 Z-score: 2721.4 bits: 514.2 E(32554): 2.9e-145
Smith-Waterman score: 2856; 99.3% identity (99.3% similar) in 442 aa overlap (2-443:706-1147)
10 20 30
pF1KE3 MACLNPVPKLYRSVIEDVIEGVRNLFAEEGI
:: : ::::::::::::::::::::::::
CCDS56 SVPDTCASRTEVRSLGVESDVQPQKHVQQRACYNIQPKLYRSVIEDVIEGVRNLFAEEGI
680 690 700 710 720 730
40 50 60 70 80 90
pF1KE3 EEQVLKDLKQLWETKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSSTASLVIPAGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EEQVLKDLKQLWETKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSSTASLVIPAGR
740 750 760 770 780 790
100 110 120 130 140 150
pF1KE3 TLPSFTTAELGTSNSSANFTFPGYPIHVPAGVTLQTVSGHLYKVNVPIMVTETSGRAGIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TLPSFTTAELGTSNSSANFTFPGYPIHVPAGVTLQTVSGHLYKVNVPIMVTETSGRAGIL
800 810 820 830 840 850
160 170 180 190 200 210
pF1KE3 QHPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QHPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLE
860 870 880 890 900 910
220 230 240 250 260 270
pF1KE3 NATSDILVSPGNEHKIVPEALLCHQESSHYISLPGVVFSPQVSQTNSNVESVLSGSASMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 NATSDILVSPGNEHKIVPEALLCHQESSHYISLPGVVFSPQVSQTNSNVESVLSGSASMA
920 930 940 950 960 970
280 290 300 310 320 330
pF1KE3 QNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQ
980 990 1000 1010 1020 1030
340 350 360 370 380 390
pF1KE3 VDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSI
1040 1050 1060 1070 1080 1090
400 410 420 430 440 450
pF1KE3 SNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYDKIHRSKNKW
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYDKQGDTRVRH
1100 1110 1120 1130 1140 1150
460 470
pF1KE3 KFYLKDGVMCFGGRDYVFAKAIGDAEW
CCDS56 GQQ
>>CCDS56119.1 GTF2A1L gene_id:286749|Hs108|chr2 (1135 aa)
initn: 2367 init1: 2340 opt: 2348 Z-score: 2238.0 bits: 424.7 E(32554): 2.5e-118
Smith-Waterman score: 2712; 89.5% identity (89.5% similar) in 477 aa overlap (2-478:706-1135)
10 20 30
pF1KE3 MACLNPVPKLYRSVIEDVIEGVRNLFAEEGI
:: : ::::::::::::::::::::::::
CCDS56 SVPDTCASRTEVRSLGVESDVQPQKHVQQRACYNIQPKLYRSVIEDVIEGVRNLFAEEGI
680 690 700 710 720 730
40 50 60 70 80 90
pF1KE3 EEQVLKDLKQLWETKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSSTASLVIPAGR
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EEQVLKDLKQLWETKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSST---------
740 750 760 770 780
100 110 120 130 140 150
pF1KE3 TLPSFTTAELGTSNSSANFTFPGYPIHVPAGVTLQTVSGHLYKVNVPIMVTETSGRAGIL
::::::::::::::::::::::
CCDS56 --------------------------------------GHLYKVNVPIMVTETSGRAGIL
790 800
160 170 180 190 200 210
pF1KE3 QHPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QHPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLE
810 820 830 840 850 860
220 230 240 250 260 270
pF1KE3 NATSDILVSPGNEHKIVPEALLCHQESSHYISLPGVVFSPQVSQTNSNVESVLSGSASMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 NATSDILVSPGNEHKIVPEALLCHQESSHYISLPGVVFSPQVSQTNSNVESVLSGSASMA
870 880 890 900 910 920
280 290 300 310 320 330
pF1KE3 QNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQ
930 940 950 960 970 980
340 350 360 370 380 390
pF1KE3 VDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSI
990 1000 1010 1020 1030 1040
400 410 420 430 440 450
pF1KE3 SNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYDKIHRSKNKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYDKIHRSKNKW
1050 1060 1070 1080 1090 1100
460 470
pF1KE3 KFYLKDGVMCFGGRDYVFAKAIGDAEW
:::::::::::::::::::::::::::
CCDS56 KFYLKDGVMCFGGRDYVFAKAIGDAEW
1110 1120 1130
>>CCDS9874.1 GTF2A1 gene_id:2957|Hs108|chr14 (337 aa)
initn: 511 init1: 403 opt: 412 Z-score: 403.4 bits: 83.5 E(32554): 3.8e-16
Smith-Waterman score: 451; 34.6% identity (58.4% similar) in 332 aa overlap (154-478:58-337)
130 140 150 160 170 180
pF1KE3 TLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQ-LNPWS-LQ
: : ::. :. :...:: . : : :
CCDS98 LLQVQQQHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLI
30 40 50 60 70 80
190 200 210 220 230
pF1KE3 ATTEKSQRIETVLQQPAILPSG--PVDRKHLENATSDILVSPGNEHKIVPEALLCHQESS
. :. .. ::.: ::.. ::.. :. ..: : ...
CCDS98 QHMNASNMSAAATAATLALPAGVTPVQQ---------ILTNSGQLLQVVRAA-----NGA
90 100 110 120 130
240 250 260 270 280 290
pF1KE3 HYISLP--GVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLH
.:: : .::.. :: . .. :... . .. :. : : : : . ..
CCDS98 QYIFQPQQSVVLQQQV------IPQMQPGGVQAP--VIQQVLAPLPGGISPQ--TGVIIQ
140 150 160 170 180
300 310 320 330 340 350
pF1KE3 ILKNRMYGCDSVKQPRNIEEPSNIPVSEK-DSNSQVDLSIRVTDDDIGEIIQVDGSGDTS
. . : . : .. :. :.. . ...: . . . .. . ..::::.::::
CCDS98 PQQILFTGNKTQVIPTTVAAPT--PAQAQITATGQQQPQAQPAQTQAPLVLQVDGTGDTS
190 200 210 220 230 240
360 370 380 390 400 410
pF1KE3 SNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPL
:.: : ::.: : : .:: : ...:.: :: :: ::.::
CCDS98 SEE------DEDEEE-----DYDD----DEEED--KEKDGA------EDGQV---EEEPL
250 260 270
420 430 440 450 460 470
pF1KE3 NSGDDVSEQDVPDLFDTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDYVFAKAIGDA
:: ::::... .::::.::.::::::::::::::::.::::.: ..::::.:.::::::
CCDS98 NSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDA
280 290 300 310 320 330
pF1KE3 EW
::
CCDS98 EW
>>CCDS9873.1 GTF2A1 gene_id:2957|Hs108|chr14 (376 aa)
initn: 653 init1: 403 opt: 412 Z-score: 402.7 bits: 83.5 E(32554): 4.1e-16
Smith-Waterman score: 597; 33.9% identity (56.1% similar) in 481 aa overlap (2-478:5-376)
10 20 30 40 50
pF1KE3 MACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWETKVLQSKATEDFF
: : :::::::::::::. ::..: ..:..:::: .:: :::.:..::.:. : :
CCDS98 MANSANTNTVPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV-DGF
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 RNSIQSPLFTLQLPHSLHQTLQSSTA--SLVIPAGRTLPSFTTAELGTSNSSANFTFPGY
.. :. :. .: :. .: . . . : .:.:. . .. .: . : :
CCDS98 HSEEQQLLLQVQQQHQPQQQQHHHHHHHQQAQPQ-QTVPQQAQTQQVLIPASQQATAP--
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 PIHVPAGVTLQTVSGHLYKVNVPIMVTETSGR--AGILQHPIQQVFQQLGQPSVIQTSVP
. :: . .: :. :. .: .. ::. :.::.. . :: ..:. :
CCDS98 QVIVPDSKLIQ----HMNASNMSAAATAATLALPAGVT--PVQQILTNSGQ--LLQV-VR
120 130 140 150 160
180 190 200 210 220 230
pF1KE3 QLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILVSPGNEHKIVPEALL
: . : . .: . :::: ..:. ..::. . : . .:
CCDS98 AAN--GAQYIFQPQQSV--VLQQQ-VIPQ----------------MQPGGVQAPVIQQVL
170 180 190 200
240 250 260 270 280 290
pF1KE3 CHQESSHYISLPGVVFSPQVSQTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTD
::: . :::.. . . ...:. ... . ..: : : ..
CCDS98 A--------PLPGGI-SPQTGVIIQPQQILFTGNKTQVI----PTTVAAPTPAQAQITAT
210 220 230 240 250
300 310 320 330 340 350
pF1KE3 IQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSG
: .::. .:.. .:. : ..::::.:
CCDS98 GQ--------------QQPQA--QPAQ---------TQAPL-----------VLQVDGTG
260 270
360 370 380 390 400 410
pF1KE3 DTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEE
::::.: : ::.: : : .:: : ...:.: :: : :::
CCDS98 DTSSEE------DEDEEE-----DYDD----DEEED--KEKDGA------EDGQ---VEE
280 290 300 310
420 430 440 450 460 470
pF1KE3 DPLNSGDDVSEQDVPDLFDTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDYVFAKAI
.:::: ::::... .::::.::.::::::::::::::::.::::.: ..::::.:.:::
CCDS98 EPLNSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAI
320 330 340 350 360 370
pF1KE3 GDAEW
:::::
CCDS98 GDAEW
478 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 20:25:15 2016 done: Sun Nov 6 20:25:16 2016
Total Scan time: 3.020 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]