Result of FASTA (ccds) for
pFN21AE3609
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3609, 345 aa
1>>>pF1KE3609 345 - 345 aa - 345 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5423+/-0.00107; mu= 14.4628+/- 0.064
mean_var=58.5502+/-11.810, 0's: 0 Z-trim(101.7): 36 B-trim: 3 in 1/50
Lambda= 0.167614
statistics sampled from 6630 (6636) to 6630 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.566), E-opt: 0.2 (0.204), width: 16
Scan time: 2.330
The best scores are: opt bits E(32554)
CCDS7344.1 ADK gene_id:132|Hs108|chr10 ( 345) 2266 556.6 1.1e-158
CCDS7343.1 ADK gene_id:132|Hs108|chr10 ( 362) 2246 551.8 3.2e-157
CCDS55717.1 ADK gene_id:132|Hs108|chr10 ( 327) 1956 481.6 3.8e-136
CCDS55716.1 ADK gene_id:132|Hs108|chr10 ( 305) 1107 276.3 2.2e-74
>>CCDS7344.1 ADK gene_id:132|Hs108|chr10 (345 aa)
initn: 2266 init1: 2266 opt: 2266 Z-score: 2962.6 bits: 556.6 E(32554): 1.1e-158
Smith-Waterman score: 2266; 99.7% identity (100.0% similar) in 345 aa overlap (1-345:1-345)
10 20 30 40 50 60
pF1KE3 MTSVRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MTSVRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 GTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 KVAHHASENNRIFTLNLSAPFFSQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKD
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
CCDS73 KVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 IKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 IKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGD
250 260 270 280 290 300
310 320 330 340
pF1KE3 AFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH
:::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH
310 320 330 340
>>CCDS7343.1 ADK gene_id:132|Hs108|chr10 (362 aa)
initn: 2246 init1: 2246 opt: 2246 Z-score: 2936.1 bits: 551.8 E(32554): 3.2e-157
Smith-Waterman score: 2246; 99.1% identity (100.0% similar) in 343 aa overlap (3-345:20-362)
10 20 30 40
pF1KE3 MTSVRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAED
..:::::::::::::::::::::::::::::::::::::::
CCDS73 MAAAEEEPKPKKLKVEAPQALRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAED
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 KHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKA
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 AEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKAR
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE3 VCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFFSQFYKESLMKVMPYVDILFGN
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS73 VCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGN
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE3 ETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE3 VLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPD
310 320 330 340 350 360
pF1KE3 FH
::
CCDS73 FH
>>CCDS55717.1 ADK gene_id:132|Hs108|chr10 (327 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2557.8 bits: 481.6 E(32554): 3.8e-136
Smith-Waterman score: 2102; 94.5% identity (94.8% similar) in 345 aa overlap (1-345:1-327)
10 20 30 40 50 60
pF1KE3 MTSVRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEY
:::::::::::::::::::::::::::::: ::::::::::::
CCDS55 MTSVRENILFGMGNPLLDISAVVDKDFLDK------------------FDELVKKFKVEY
10 20 30 40
70 80 90 100 110 120
pF1KE3 HAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 HAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE3 GTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE3 KVAHHASENNRIFTLNLSAPFFSQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKD
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
CCDS55 KVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKD
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE3 IKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 IKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGD
230 240 250 260 270 280
310 320 330 340
pF1KE3 AFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH
:::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH
290 300 310 320
>>CCDS55716.1 ADK gene_id:132|Hs108|chr10 (305 aa)
initn: 1871 init1: 1107 opt: 1107 Z-score: 1448.8 bits: 276.3 E(32554): 2.2e-74
Smith-Waterman score: 1761; 82.8% identity (83.4% similar) in 343 aa overlap (3-345:20-305)
10 20 30 40
pF1KE3 MTSVRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAED
..:::::::::::::::::::::::::::::::::::::::
CCDS55 MAAAEEEPKPKKLKVEAPQALRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAED
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 KHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKA
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 AEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKAR
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE3 VCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFFSQFYKESLMKVMPYVDILFGN
:::::
CCDS55 VCYIA-------------------------------------------------------
230 240 250 260 270 280
pF1KE3 ETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 --EAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFA
190 200 210 220 230 240
290 300 310 320 330 340
pF1KE3 VLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPD
250 260 270 280 290 300
pF1KE3 FH
::
CCDS55 FH
345 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 17:36:46 2016 done: Mon Nov 7 17:36:46 2016
Total Scan time: 2.330 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]