FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3606, 479 aa
  1>>>pF1KE3606 479 - 479 aa - 479 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.1095+/-0.000768; mu= 11.1836+/- 0.047
 mean_var=130.7113+/-26.232, 0's: 0 Z-trim(113.2): 3  B-trim: 0 in 0/52
 Lambda= 0.112181
 statistics sampled from 13829 (13831) to 13829 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.425), width:  16
 Scan time:  2.440

The best scores are:                                      opt bits E(32554)
CCDS7469.1 PI4K2A gene_id:55361|Hs108|chr10        ( 479) 3296 544.4 9.9e-155
CCDS3433.1 PI4K2B gene_id:55300|Hs108|chr4         ( 481) 1853 310.9   2e-84


>>CCDS7469.1 PI4K2A gene_id:55361|Hs108|chr10             (479 aa)
 initn: 3296 init1: 3296 opt: 3296  Z-score: 2891.4  bits: 544.4 E(32554): 9.9e-155
Smith-Waterman score: 3296; 100.0% identity (100.0% similar) in 479 aa overlap (1-479:1-479)

               10        20        30        40        50        60
pF1KE3 MDETSPLVSPERAQPPDYTFPSGSGAHFPQVPGGAVRVAAAAGSGPSPPGSPGHDRERQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MDETSPLVSPERAQPPDYTFPSGSGAHFPQVPGGAVRVAAAAGSGPSPPGSPGHDRERQP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 LLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAELA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 IERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYGHLNPKWTKWLQKLCCPCCFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 IERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYGHLNPKWTKWLQKLCCPCCFG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 RDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSRGKRLALEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSRGKRLALEK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 VPKVGQRFNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAEPLPENTNRQLLLQFERLVVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VPKVGQRFNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAEPLPENTNRQLLLQFERLVVL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 DYIIRNTDRGNDNWLIKYDCPMDSSSSRDTDWVVVKEPVIKVAAIDNGLAFPLKHPDSWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 DYIIRNTDRGNDNWLIKYDCPMDSSSSRDTDWVVVKEPVIKVAAIDNGLAFPLKHPDSWR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE3 AYPFYWAWLPQAKVPFSQEIKDLILPKISDPNFVKDLEEDLYELFKKDPGFDRGQFHKQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 AYPFYWAWLPQAKVPFSQEIKDLILPKISDPNFVKDLEEDLYELFKKDPGFDRGQFHKQI
              370       380       390       400       410       420

              430       440       450       460       470         
pF1KE3 AVMRGQILNLTQALKDNKSPLHLVQMPPVIVETARSHQRSSSESYTQSFQSRKPFFSWW
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 AVMRGQILNLTQALKDNKSPLHLVQMPPVIVETARSHQRSSSESYTQSFQSRKPFFSWW
              430       440       450       460       470         

>>CCDS3433.1 PI4K2B gene_id:55300|Hs108|chr4              (481 aa)
 initn: 1926 init1: 1172 opt: 1853  Z-score: 1629.2  bits: 310.9 E(32554): 2e-84
Smith-Waterman score: 1891; 59.8% identity (78.8% similar) in 490 aa overlap (9-479:17-481)

                       10          20        30          40        
pF1KE3         MDETSPLVSPERAQPPDYT--FPSGSGAHFPQ--VPGGAVRVAAAAG----S
                       :::. .  .    .:  . :: :.  .::.:::.  :::    .
CCDS34 MEDPSEPDRLASADGGSPEEEEDGEREPLLPRIAWAH-PRRGAPGSAVRLLDAAGEEGEA
               10        20        30         40        50         

               50        60        70        80        90       100
pF1KE3 G----PSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRE
       :    : :::. : .:  .  :::.: :.    . :....                   :
CCDS34 GDEELPLPPGDVGVSRSSSAELDRSRPAV----SVTIGTS-------------------E
      60        70        80            90                         

              110       120       130       140       150       160
pF1KE3 RNEFPEDPEFEAVVRQAELAIERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYG
        : : .::::  .. .:: :::  :::::: ::::::::::::. .::.:::::.:::::
CCDS34 MNAFLDDPEFADIMLRAEQAIEVGIFPERISQGSSGSYFVKDPKRKIIGVFKPKSEEPYG
        100       110       120       130       140       150      

              170       180       190       200       210       220
pF1KE3 HLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASET
       .:::::::...:.:::::::: ::. :::::::::: :::.::.:.:::.::::.:.:::
CCDS34 QLNPKWTKYVHKVCCPCCFGRGCLIPNQGYLSEAGAYLVDNKLHLSIVPKTKVVWLVSET
        160       170       180       190       200       210      

              230       240       250       260       270       280
pF1KE3 FNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAE
       :::.::::.:::::. :::::::::..:.:::::::.:::::::::::.:.::::.:::.
CCDS34 FNYNAIDRAKSRGKKYALEKVPKVGRKFHRIGLPPKIGSFQLFVEGYKEAEYWLRKFEAD
        220       230       240       250       260       270      

              290       300       310          320       330       
pF1KE3 PLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYD---CPMDSSSSRDTDWVVVKE
       :::::  .:.  ::::::.::::::::::::::::..:.   :  . .  ... :.  .:
CCDS34 PLPENIRKQFQSQFERLVILDYIIRNTDRGNDNWLVRYEKQKCEKEIDH-KESKWIDDEE
        280       290       300       310       320        330     

       340       350       360       370       380       390       
pF1KE3 PVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDPNFVKDL
        .::.::::::::::.:::: ::::::.::::::::::::.::..:::: ::: :::.::
CCDS34 FLIKIAAIDNGLAFPFKHPDEWRAYPFHWAWLPQAKVPFSEEIRNLILPYISDMNFVQDL
         340       350       360       370       380       390     

       400       410       420       430       440       450       
pF1KE3 EEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQMPPVIVETARSH
        :::::::: : :::.. :..:..:::::::::::::.:.:::..:::.: :::: ... 
CCDS34 CEDLYELFKTDKGFDKATFESQMSVMRGQILNLTQALRDGKSPFQLVQIPCVIVERSQGG
         400       410       420       430       440       450     

       460           470         
pF1KE3 QRSS----SESYTQSFQSRKPFFSWW
       ...     :.:.::. . :::::: :
CCDS34 SQGRIVHLSNSFTQTVNCRKPFFSSW
         460       470       480 




479 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 05:04:26 2016 done: Tue Nov  8 05:04:26 2016
 Total Scan time:  2.440 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]