Result of FASTA (ccds) for
pFN21AE3603
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3603, 211 aa
1>>>pF1KE3603 211 - 211 aa - 211 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4538+/-0.00107; mu= 12.6642+/- 0.064
mean_var=75.7299+/-15.648, 0's: 0 Z-trim(104.9): 185 B-trim: 251 in 1/48
Lambda= 0.147381
statistics sampled from 7942 (8152) to 7942 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.25), width: 16
Scan time: 1.940
The best scores are: opt bits E(32554)
CCDS8281.1 RAB38 gene_id:23682|Hs108|chr11 ( 211) 1428 313.0 8.7e-86
CCDS5210.1 RAB32 gene_id:10981|Hs108|chr6 ( 225) 922 205.4 2.2e-53
CCDS1459.1 RAB29 gene_id:8934|Hs108|chr1 ( 203) 710 160.3 7.6e-40
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 443 103.6 9.4e-23
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 440 102.9 1.4e-22
CCDS44301.1 RAB29 gene_id:8934|Hs108|chr1 ( 179) 426 99.9 1e-21
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 423 99.3 1.8e-21
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 ( 207) 416 97.8 5.1e-21
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 408 96.1 1.7e-20
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 400 94.4 5.5e-20
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 396 93.6 9.7e-20
CCDS3976.1 RAB3C gene_id:115827|Hs108|chr5 ( 227) 395 93.4 1.2e-19
CCDS560.1 RAB3B gene_id:5865|Hs108|chr1 ( 219) 390 92.3 2.5e-19
CCDS44302.1 RAB29 gene_id:8934|Hs108|chr1 ( 131) 387 91.5 2.5e-19
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 387 91.7 3.6e-19
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 380 90.2 1.1e-18
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 378 89.7 1.4e-18
CCDS73011.1 RAB7B gene_id:338382|Hs108|chr1 ( 199) 374 88.9 2.4e-18
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 372 88.5 3.3e-18
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 368 87.6 6.2e-18
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 367 87.4 7.1e-18
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18 ( 244) 367 87.4 7.9e-18
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 364 86.8 1.1e-17
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19 ( 219) 364 86.8 1.1e-17
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 359 85.7 2.3e-17
CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX ( 201) 356 85.1 3.4e-17
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 352 84.2 6.5e-17
CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4 ( 229) 352 84.2 6.9e-17
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 351 84.0 7.4e-17
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 348 83.4 1.1e-16
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 347 83.2 1.4e-16
CCDS8338.1 RAB39A gene_id:54734|Hs108|chr11 ( 217) 346 83.0 1.6e-16
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 345 82.7 1.8e-16
CCDS14766.1 RAB39B gene_id:116442|Hs108|chrX ( 213) 343 82.3 2.4e-16
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 339 81.5 4.5e-16
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 337 81.0 6e-16
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 337 81.0 6e-16
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX ( 201) 336 80.8 6.5e-16
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 337 81.1 6.9e-16
CCDS9768.1 RAB15 gene_id:376267|Hs108|chr14 ( 208) 334 80.4 9e-16
CCDS4962.1 RAB23 gene_id:51715|Hs108|chr6 ( 237) 334 80.4 1e-15
CCDS53836.1 RAB35 gene_id:11021|Hs108|chr12 ( 152) 329 79.2 1.5e-15
CCDS41413.1 RAB25 gene_id:57111|Hs108|chr1 ( 213) 329 79.3 1.9e-15
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 326 78.7 2.7e-15
CCDS44803.1 CRACR2A gene_id:84766|Hs108|chr12 ( 731) 331 80.1 3.9e-15
CCDS76258.1 RAB7B gene_id:338382|Hs108|chr1 ( 157) 322 77.8 4.2e-15
CCDS14621.1 RAB33A gene_id:9363|Hs108|chrX ( 237) 323 78.1 5.1e-15
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 321 77.6 6.3e-15
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 319 77.2 8.1e-15
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 319 77.2 8.7e-15
>>CCDS8281.1 RAB38 gene_id:23682|Hs108|chr11 (211 aa)
initn: 1428 init1: 1428 opt: 1428 Z-score: 1653.6 bits: 313.0 E(32554): 8.7e-86
Smith-Waterman score: 1428; 100.0% identity (100.0% similar) in 211 aa overlap (1-211:1-211)
10 20 30 40 50 60
pF1KE3 MQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 SVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 SVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILAN
130 140 150 160 170 180
190 200 210
pF1KE3 ECDLMESIEPDVVKPHLTSTKVASCSGCAKS
:::::::::::::::::::::::::::::::
CCDS82 ECDLMESIEPDVVKPHLTSTKVASCSGCAKS
190 200 210
>>CCDS5210.1 RAB32 gene_id:10981|Hs108|chr6 (225 aa)
initn: 911 init1: 720 opt: 922 Z-score: 1071.8 bits: 205.4 E(32554): 2.2e-53
Smith-Waterman score: 922; 66.8% identity (87.0% similar) in 208 aa overlap (3-208:18-224)
10 20 30 40
pF1KE3 MQAPH-KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGV
::. .:::.:.::::.::::::::::::::: ::.::::::::
CCDS52 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 DFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKW
:::::::.:: .:.::::::::::::::::::::::.::.:::.:::..: .::::: ::
CCDS52 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 KNDLDSKLSLPNGKPVSVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENI
:.:::::. ::::.:. .:::::::::.:: .. . ..:::::::::.::::::::.::
CCDS52 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPS-QVDQFCKEHGFAGWFETSAKDNI
130 140 150 160 170
170 180 190 200 210
pF1KE3 NIDEASRCLVKHILANECDL-MESIEPDVVKPHLTSTKVASCSGCAKS
::.::.: ::..::.:. .. : . : .: . .. . : :
CCDS52 NIEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQCC
180 190 200 210 220
>>CCDS1459.1 RAB29 gene_id:8934|Hs108|chr1 (203 aa)
initn: 684 init1: 564 opt: 710 Z-score: 828.8 bits: 160.3 E(32554): 7.6e-40
Smith-Waterman score: 710; 52.0% identity (78.7% similar) in 202 aa overlap (6-205:4-203)
10 20 30 40 50 60
pF1KE3 MQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR
..::.:.::.:: .:::::...:: ...::.::..:.:::::::::.:. .::
CCDS14 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVR
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPV
:::::::::::: .:::.:::.: . :.:::: .:: .::.::::::.::::.::
CCDS14 LQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 SVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILAN
.::::::: . .. . ..:.: ::.::.:: :::.::: ::.:: : :..... :
CCDS14 PCLLLANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN
120 130 140 150 160 170
190 200 210
pF1KE3 EC-DLME-SIEPDVVKPHLTSTKVASCSGCAKS
:.: : . : .. . :.. . :
CCDS14 STEDIMSLSTQGDYINLQTKSSSWSCC
180 190 200
>>CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 (203 aa)
initn: 425 init1: 177 opt: 443 Z-score: 522.0 bits: 103.6 E(32554): 9.4e-23
Smith-Waterman score: 443; 41.6% identity (72.8% similar) in 173 aa overlap (7-178:6-170)
10 20 30 40 50 60
pF1KE3 MQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR
.::.:::.::: ::::: .: :....::.. : .:::.:: .... . . . .
CCDS10 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-K
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPV
::.:: :::::: ..: .::: ::: ..:.:.: .:: . .: ... . : :
CCDS10 LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGV
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 SVVLLANKCD-QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILA
.::.:::: ..: .... . :.. .::: . .:::::: ..:.::: :.. ::
CCDS10 ERLLLGNKCDMEAKRKVQKE--QADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILL
120 130 140 150 160 170
180 190 200 210
pF1KE3 NECDLMESIEPDVVKPHLTSTKVASCSGCAKS
CCDS10 KSGGRRSGNGNKPPSTDLKTCDKKNTNKCSLG
180 190 200
>>CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 (200 aa)
initn: 428 init1: 191 opt: 440 Z-score: 518.7 bits: 102.9 E(32554): 1.4e-22
Smith-Waterman score: 440; 42.4% identity (71.2% similar) in 170 aa overlap (9-178:9-171)
10 20 30 40 50 60
pF1KE3 MQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR
:.:::.::: ::::: .. :. . :.. . .:::.:: .:... . . . .
CCDS17 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-K
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPV
::.:: :::::: ..: ::: ::: ..:.:.: .:: ..:: ..: . . . :
CCDS17 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 SVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILAN
.::.::::. .. .: : .:. .::: . .:::::: ::::..: :.. ::
CCDS17 ERMLLGNKCDMDDKRVVPKG-KGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK
120 130 140 150 160 170
190 200 210
pF1KE3 ECDLMESIEPDVVKPHLTSTKVASCSGCAKS
CCDS17 TPVKEPNSENVDISSGGGVTGWKSKCC
180 190 200
>>CCDS44301.1 RAB29 gene_id:8934|Hs108|chr1 (179 aa)
initn: 400 init1: 280 opt: 426 Z-score: 503.3 bits: 99.9 E(32554): 1e-21
Smith-Waterman score: 527; 43.1% identity (68.3% similar) in 202 aa overlap (6-205:4-179)
10 20 30 40 50 60
pF1KE3 MQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR
..::.:.::.:: .:::::...:: ...::.::..:.:
CCDS44 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG-----------------
10 20 30 40
70 80 90 100 110 120
pF1KE3 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPV
::::: .:::.:::.: . :.:::: .:: .::.::::::.::::.::
CCDS44 -------GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPV
50 60 70 80 90
130 140 150 160 170 180
pF1KE3 SVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILAN
.::::::: . .. . ..:.: ::.::.:: :::.::: ::.:: : :..... :
CCDS44 PCLLLANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN
100 110 120 130 140 150
190 200 210
pF1KE3 EC-DLME-SIEPDVVKPHLTSTKVASCSGCAKS
:.: : . : .. . :.. . :
CCDS44 STEDIMSLSTQGDYINLQTKSSSWSCC
160 170
>>CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 (201 aa)
initn: 252 init1: 175 opt: 423 Z-score: 499.1 bits: 99.3 E(32554): 1.8e-21
Smith-Waterman score: 423; 37.6% identity (65.9% similar) in 205 aa overlap (7-205:6-200)
10 20 30 40 50 60
pF1KE3 MQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR
.::.:::.::: ::::.:.. :.. ..::. : .:::::: ..... . : : .
CCDS41 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-K
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPV
::.:: :::::: ..: .::: . :...:.::: .: : .: ..... : :
CCDS41 LQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-----NCDDV
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 SVVLLANKCD--QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHIL
.:..:: : . : : ... : : . : . ::::::::.:..: :... .:
CCDS41 CRILVGNKNDDPERKVVETEDAYK---FAGQMG-IQLFETSAKENVNVEEMFNCITELVL
120 130 140 150 160
180 190 200 210
pF1KE3 ANECDLM----ESIEPDVVKPHLTSTKVASCSGCAKS
. : . .. . :::: .: . :
CCDS41 RAKKDNLAKQQQQQQNDVVKLTKNSKRKKRCC
170 180 190 200
>>CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 (207 aa)
initn: 382 init1: 166 opt: 416 Z-score: 490.9 bits: 97.8 E(32554): 5.1e-21
Smith-Waterman score: 416; 35.0% identity (68.0% similar) in 206 aa overlap (6-209:5-206)
10 20 30 40 50 60
pF1KE3 MQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR
:. : :....:: ::::::....::...::..:.::::.:: : . : . .:
CCDS30 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVT
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPV
.:.:: :::::: .. ..:: : .::::: : ::... .:.... . : . .
CCDS30 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 SVVLLANKCD-QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILA
:.:.:: : ....: . . . .: .. . .::::::: ::...: . .... :
CCDS30 PFVVLGNKIDLENRQVATK---RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK
120 130 140 150 160 170
180 190 200 210
pF1KE3 NECDLMESIE-PDVVKPHLTSTKVASCSGCAKS
.: .. : :. .: .. :: .:.
CCDS30 QETEVELYNEFPEPIKLDKNDRAKASAESCSC
180 190 200
>>CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 (220 aa)
initn: 346 init1: 170 opt: 408 Z-score: 481.3 bits: 96.1 E(32554): 1.7e-20
Smith-Waterman score: 408; 33.3% identity (69.6% similar) in 207 aa overlap (7-209:20-219)
10 20 30 40
pF1KE3 MQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFA
....:.:.::. .:::::.. ::. ..:. . .:.:.::
CCDS12 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 LKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKND
.:... . . . .::.:: :::::. ..: .::: ::: ....:.: .:.:: :...
CCDS12 VKTIYRNDKRI-KLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQ
70 80 90 100 110
110 120 130 140 150 160
pF1KE3 LDSKLSLPNGKPVSVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINID
. . : :.. :.:..::::. .: . .. . :. . :: .::.:::.:::.
CCDS12 IKT-YSWDNAQ---VLLVGNKCDM-EDERVVSSERGRQLADHLGFE-FFEASAKDNINVK
120 130 140 150 160 170
170 180 190 200 210
pF1KE3 EASRCLVKHILANECDLMESIEPDVVK----PHLTSTKVASCSGCAKS
.. . :: : . . ... .: :. :.:.. .: . ::
CCDS12 QTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
180 190 200 210 220
>>CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 (212 aa)
initn: 347 init1: 196 opt: 400 Z-score: 472.3 bits: 94.4 E(32554): 5.5e-20
Smith-Waterman score: 400; 37.8% identity (69.1% similar) in 188 aa overlap (3-188:2-180)
10 20 30 40 50 60
pF1KE3 MQAPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR
: . . :..::.::: ::::: .. :.. ..: : . .:::::: .:... : ::
CCDS76 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDG-IKVR
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPV
.:.:: :::::. ..:. :::.:.: :.:.:.. ... . :: .:.: :.: :
CCDS76 IQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYA--PEG--V
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 SVVLLANKCD--QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHIL
. .:..:: : : ..: ..: .:. ::.: . ..:::: :.:: :. :.. .:
CCDS76 QKILIGNKADEEQKRQVGREQG---QQLAKEYG-MDFYETSACTNLNIKESFTRLTELVL
120 130 140 150 160 170
180 190 200 210
pF1KE3 ANECDLMESIEPDVVKPHLTSTKVASCSGCAKS
. .:..
CCDS76 QAHRKELEGLRMRASNELALAELEEEEGKPEGPANSSKTCWC
180 190 200 210
211 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:15:23 2016 done: Mon Nov 7 01:15:23 2016
Total Scan time: 1.940 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]