Result of FASTA (ccds) for
pFN21AE3436
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3436, 929 aa
1>>>pF1KE3436 929 - 929 aa - 929 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.7809+/-0.00118; mu= -0.4872+/- 0.071
mean_var=194.5927+/-41.871, 0's: 0 Z-trim(106.8): 50 B-trim: 0 in 0/51
Lambda= 0.091941
statistics sampled from 9175 (9198) to 9175 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.283), width: 16
Scan time: 4.520
The best scores are: opt bits E(32554)
CCDS9076.1 SCYL2 gene_id:55681|Hs108|chr12 ( 929) 6104 823.2 0
CCDS81726.1 SCYL2 gene_id:55681|Hs108|chr12 ( 933) 6086 820.8 0
>>CCDS9076.1 SCYL2 gene_id:55681|Hs108|chr12 (929 aa)
initn: 6104 init1: 6104 opt: 6104 Z-score: 4388.0 bits: 823.2 E(32554): 0
Smith-Waterman score: 6104; 100.0% identity (100.0% similar) in 929 aa overlap (1-929:1-929)
10 20 30 40 50 60
pF1KE3 MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNGLAWKIFNGTKKSTKQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNGLAWKIFNGTKKSTKQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 VAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLHSSVKMVHGNIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 PVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLHSSVKMVHGNIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 PENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 PENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYILS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 VSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNIPEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 VSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNIPEEV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 REHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 REHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 PKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLILPELGPVFKQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 PKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLILPELGPVFKQQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 EPIQILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFANLID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 EPIQILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFANLID
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 YPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVLDDILPFLQQIPSKEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 YPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVLDDILPFLQQIPSKEP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 AVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 AVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 RLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 RLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 ESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 ESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLT
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 DTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNANMGFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 DTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNANMGFQ
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 TSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTDMSAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 TSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTDMSAL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE3 NNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGMQGNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 NNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGMQGNP
850 860 870 880 890 900
910 920
pF1KE3 FFNPQNFAQPPTTMTNSSSASNDLKDLFG
:::::::::::::::::::::::::::::
CCDS90 FFNPQNFAQPPTTMTNSSSASNDLKDLFG
910 920
>>CCDS81726.1 SCYL2 gene_id:55681|Hs108|chr12 (933 aa)
initn: 6090 init1: 3281 opt: 6086 Z-score: 4375.1 bits: 820.8 E(32554): 0
Smith-Waterman score: 6086; 99.6% identity (99.6% similar) in 933 aa overlap (1-929:1-933)
10 20 30 40 50 60
pF1KE3 MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNGLAWKIFNGTKKSTKQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNGLAWKIFNGTKKSTKQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 VAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLHSSVKMVHGNIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLHSSVKMVHGNIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 PENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYILS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 VSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNIPEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 VSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNIPEEV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 REHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 REHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 PKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLILPELGPVFKQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLILPELGPVFKQQ
370 380 390 400 410 420
430 440 450 460 470
pF1KE3 EPIQ----ILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFA
:::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 EPIQASNMILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFA
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE3 NLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVLDDILPFLQQIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 NLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVLDDILPFLQQIP
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE3 SKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 SKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIK
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE3 EMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 EMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADL
610 620 630 640 650 660
660 670 680 690 700 710
pF1KE3 LTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 LTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQT
670 680 690 700 710 720
720 730 740 750 760 770
pF1KE3 KDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 KDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNAN
730 740 750 760 770 780
780 790 800 810 820 830
pF1KE3 MGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTD
790 800 810 820 830 840
840 850 860 870 880 890
pF1KE3 MSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGM
850 860 870 880 890 900
900 910 920
pF1KE3 QGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG
:::::::::::::::::::::::::::::::::
CCDS81 QGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG
910 920 930
929 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 23:33:02 2016 done: Sat Nov 5 23:33:03 2016
Total Scan time: 4.520 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]