Result of FASTA (omim) for
pFN21AE3409
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3409, 305 aa
1>>>pF1KE3409 305 - 305 aa - 305 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.8966+/-0.000511; mu= -22.9186+/- 0.030
mean_var=746.4279+/-172.859, 0's: 0 Z-trim(117.6): 232 B-trim: 1814 in 1/56
Lambda= 0.046944
statistics sampled from 29510 (29768) to 29510 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.349), width: 16
Scan time: 6.520
The best scores are: opt bits E(85289)
NP_001008910 (OMIM: 604719) serine/threonine-prote ( 305) 2106 158.0 2.1e-38
NP_001317142 (OMIM: 604719) serine/threonine-prote ( 305) 2106 158.0 2.1e-38
NP_001317143 (OMIM: 604719) serine/threonine-prote ( 273) 1291 102.8 8.1e-22
XP_016860649 (OMIM: 604719) PREDICTED: serine/thre ( 169) 1089 88.8 8e-18
NP_001317144 (OMIM: 604719) serine/threonine-prote ( 187) 1086 88.7 9.8e-18
XP_016863483 (OMIM: 602052) PREDICTED: cyclin-G-as (1197) 426 45.0 0.00086
XP_005272327 (OMIM: 602052) PREDICTED: cyclin-G-as (1236) 426 45.1 0.00088
XP_011511733 (OMIM: 602052) PREDICTED: cyclin-G-as (1272) 426 45.1 0.00089
XP_005272325 (OMIM: 602052) PREDICTED: cyclin-G-as (1300) 426 45.1 0.0009
XP_011511730 (OMIM: 602052) PREDICTED: cyclin-G-as (1306) 426 45.1 0.00091
NP_005246 (OMIM: 602052) cyclin-G-associated kinas (1311) 426 45.1 0.00091
XP_011511728 (OMIM: 602052) PREDICTED: cyclin-G-as (1344) 426 45.1 0.00092
XP_011511727 (OMIM: 602052) PREDICTED: cyclin-G-as (1355) 426 45.1 0.00093
NP_055726 (OMIM: 616405) AP2-associated protein ki ( 961) 407 43.6 0.0018
>>NP_001008910 (OMIM: 604719) serine/threonine-protein k (305 aa)
initn: 2106 init1: 2106 opt: 2106 Z-score: 810.4 bits: 158.0 E(85289): 2.1e-38
Smith-Waterman score: 2106; 100.0% identity (100.0% similar) in 305 aa overlap (1-305:1-305)
10 20 30 40 50 60
pF1KE3 MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDRE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 TEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 KGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ
250 260 270 280 290 300
pF1KE3 HTTQI
:::::
NP_001 HTTQI
>>NP_001317142 (OMIM: 604719) serine/threonine-protein k (305 aa)
initn: 2106 init1: 2106 opt: 2106 Z-score: 810.4 bits: 158.0 E(85289): 2.1e-38
Smith-Waterman score: 2106; 100.0% identity (100.0% similar) in 305 aa overlap (1-305:1-305)
10 20 30 40 50 60
pF1KE3 MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDRE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 TEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 KGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ
250 260 270 280 290 300
pF1KE3 HTTQI
:::::
NP_001 HTTQI
>>NP_001317143 (OMIM: 604719) serine/threonine-protein k (273 aa)
initn: 1859 init1: 1291 opt: 1291 Z-score: 512.7 bits: 102.8 E(85289): 8.1e-22
Smith-Waterman score: 1799; 89.5% identity (89.5% similar) in 305 aa overlap (1-305:1-273)
10 20 30 40 50 60
pF1KE3 MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDRE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 TEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ
::::::: :::::::::::::::::::::
NP_001 RQALTLQ--------------------------------SLGCVLYAMMFGEGPYDMVFQ
190 200
250 260 270 280 290 300
pF1KE3 KGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ
210 220 230 240 250 260
pF1KE3 HTTQI
:::::
NP_001 HTTQI
270
>>XP_016860649 (OMIM: 604719) PREDICTED: serine/threonin (169 aa)
initn: 1089 init1: 1089 opt: 1089 Z-score: 441.0 bits: 88.8 E(85289): 8e-18
Smith-Waterman score: 1089; 98.1% identity (99.4% similar) in 162 aa overlap (144-305:8-169)
120 130 140 150 160 170
pF1KE3 KDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA
.. :::::::::::::::::::::::::::
XP_016 MRPGCCYHSSRDLKPTNILLGDEGQPVLMDLGSMNQA
10 20 30
180 190 200 210 220 230
pF1KE3 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG
40 50 60 70 80 90
240 250 260 270 280 290
pF1KE3 PYDMVFQKGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPHIPLLLSQLEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PYDMVFQKGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPHIPLLLSQLEAL
100 110 120 130 140 150
300
pF1KE3 QPPAPGQHTTQI
::::::::::::
XP_016 QPPAPGQHTTQI
160
>>NP_001317144 (OMIM: 604719) serine/threonine-protein k (187 aa)
initn: 1080 init1: 1080 opt: 1086 Z-score: 439.4 bits: 88.7 E(85289): 9.8e-18
Smith-Waterman score: 1086; 90.2% identity (91.8% similar) in 183 aa overlap (130-305:5-187)
100 110 120 130 140 150
pF1KE3 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC-RGLEAIHAKGY------AHRDLKPT
: .: :: : : : .. :::::
NP_001 MGHALCVCSRGTVIIDNKRYLFIQKLGEGDLKPT
10 20 30
160 170 180 190 200 210
pF1KE3 NILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVI
40 50 60 70 80 90
220 230 240 250 260 270
pF1KE3 DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALRQLLNSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALRQLLNSM
100 110 120 130 140 150
280 290 300
pF1KE3 MTVDPHQRPHIPLLLSQLEALQPPAPGQHTTQI
:::::::::::::::::::::::::::::::::
NP_001 MTVDPHQRPHIPLLLSQLEALQPPAPGQHTTQI
160 170 180
>>XP_016863483 (OMIM: 602052) PREDICTED: cyclin-G-associ (1197 aa)
initn: 315 init1: 137 opt: 426 Z-score: 189.1 bits: 45.0 E(85289): 0.00086
Smith-Waterman score: 426; 30.6% identity (62.6% similar) in 281 aa overlap (26-293:46-316)
10 20 30 40 50
pF1KE3 MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE
:.::::..: .. . .:. :::::.: .:
XP_016 SLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE
20 30 40 50 60 70
60 70 80 90 100
pF1KE3 QQ-DREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA------WLLLPFFKRGTLWN
.. .: :. :..: .:::: : .: .:.:. .::: . .: : .
XP_016 EEKNRAIIQEVCFMKKLSGHPNI---VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE3 EIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMD
.......: :. : .: .. ::... .: . ::::: :.::...: : :
XP_016 FLKKMESRGP-LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE3 LGSMNQACIHVEGS----RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLG
.:: . . . : :.:: ... .. : ::.::.... :. : :. :.:.::
XP_016 FGSATTISHYPDYSWSAQRRAL-VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE3 CVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPH
:.:: . : . : :. : .. . :... ::: . .....:. .:. :.:..:
XP_016 CILYLLCFRQHP----FEDGAKLRI-VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLS
260 270 280 290 300
290 300
pF1KE3 IPLLLSQLEALQPPAPGQHTTQI
: .. ::. .
XP_016 IAEVVHQLQEIAAARNVNPKSPITELLEQNGGYGSATLSRGPPPPVGPAGSGYSGGLALA
310 320 330 340 350 360
>>XP_005272327 (OMIM: 602052) PREDICTED: cyclin-G-associ (1236 aa)
initn: 315 init1: 137 opt: 426 Z-score: 188.9 bits: 45.1 E(85289): 0.00088
Smith-Waterman score: 426; 30.6% identity (62.6% similar) in 281 aa overlap (26-293:46-316)
10 20 30 40 50
pF1KE3 MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE
:.::::..: .. . .:. :::::.: .:
XP_005 SLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE
20 30 40 50 60 70
60 70 80 90 100
pF1KE3 QQ-DREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA------WLLLPFFKRGTLWN
.. .: :. :..: .:::: : .: .:.:. .::: . .: : .
XP_005 EEKNRAIIQEVCFMKKLSGHPNI---VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE3 EIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMD
.......: :. : .: .. ::... .: . ::::: :.::...: : :
XP_005 FLKKMESRGP-LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE3 LGSMNQACIHVEGS----RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLG
.:: . . . : :.:: ... .. : ::.::.... :. : :. :.:.::
XP_005 FGSATTISHYPDYSWSAQRRAL-VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE3 CVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPH
:.:: . : . : :. : .. . :... ::: . .....:. .:. :.:..:
XP_005 CILYLLCFRQHP----FEDGAKLRI-VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLS
260 270 280 290 300
290 300
pF1KE3 IPLLLSQLEALQPPAPGQHTTQI
: .. ::. .
XP_005 IAEVVHQLQEIAAARNVNPKSPITELLEQNGGYGSATLSRGPPPPVGPAGSGYSGGLALA
310 320 330 340 350 360
>>XP_011511733 (OMIM: 602052) PREDICTED: cyclin-G-associ (1272 aa)
initn: 315 init1: 137 opt: 426 Z-score: 188.8 bits: 45.1 E(85289): 0.00089
Smith-Waterman score: 426; 30.6% identity (62.6% similar) in 281 aa overlap (26-293:46-316)
10 20 30 40 50
pF1KE3 MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE
:.::::..: .. . .:. :::::.: .:
XP_011 SLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE
20 30 40 50 60 70
60 70 80 90 100
pF1KE3 QQ-DREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA------WLLLPFFKRGTLWN
.. .: :. :..: .:::: : .: .:.:. .::: . .: : .
XP_011 EEKNRAIIQEVCFMKKLSGHPNI---VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE3 EIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMD
.......: :. : .: .. ::... .: . ::::: :.::...: : :
XP_011 FLKKMESRGP-LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE3 LGSMNQACIHVEGS----RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLG
.:: . . . : :.:: ... .. : ::.::.... :. : :. :.:.::
XP_011 FGSATTISHYPDYSWSAQRRAL-VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE3 CVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPH
:.:: . : . : :. : .. . :... ::: . .....:. .:. :.:..:
XP_011 CILYLLCFRQHP----FEDGAKLRI-VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLS
260 270 280 290 300
290 300
pF1KE3 IPLLLSQLEALQPPAPGQHTTQI
: .. ::. .
XP_011 IAEVVHQLQEIAAARNVNPKSPITELLEQNGGYGSATLSRGPPPPVGPAGSGYSGGLALA
310 320 330 340 350 360
>>XP_005272325 (OMIM: 602052) PREDICTED: cyclin-G-associ (1300 aa)
initn: 315 init1: 137 opt: 426 Z-score: 188.7 bits: 45.1 E(85289): 0.0009
Smith-Waterman score: 426; 30.6% identity (62.6% similar) in 281 aa overlap (26-293:46-316)
10 20 30 40 50
pF1KE3 MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE
:.::::..: .. . .:. :::::.: .:
XP_005 SLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE
20 30 40 50 60 70
60 70 80 90 100
pF1KE3 QQ-DREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA------WLLLPFFKRGTLWN
.. .: :. :..: .:::: : .: .:.:. .::: . .: : .
XP_005 EEKNRAIIQEVCFMKKLSGHPNI---VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE3 EIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMD
.......: :. : .: .. ::... .: . ::::: :.::...: : :
XP_005 FLKKMESRGP-LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE3 LGSMNQACIHVEGS----RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLG
.:: . . . : :.:: ... .. : ::.::.... :. : :. :.:.::
XP_005 FGSATTISHYPDYSWSAQRRAL-VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE3 CVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPH
:.:: . : . : :. : .. . :... ::: . .....:. .:. :.:..:
XP_005 CILYLLCFRQHP----FEDGAKLRI-VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLS
260 270 280 290 300
290 300
pF1KE3 IPLLLSQLEALQPPAPGQHTTQI
: .. ::. .
XP_005 IAEVVHQLQEIAAARNVNPKSPITELLEQNGGYGSATLSRGPPPPVGPAGSGYSGGLALA
310 320 330 340 350 360
>>XP_011511730 (OMIM: 602052) PREDICTED: cyclin-G-associ (1306 aa)
initn: 282 init1: 137 opt: 426 Z-score: 188.7 bits: 45.1 E(85289): 0.00091
Smith-Waterman score: 426; 30.6% identity (62.6% similar) in 281 aa overlap (26-293:46-316)
10 20 30 40 50
pF1KE3 MGHALCVCSRGTVIIDNKRYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE
:.::::..: .. . .:. :::::.: .:
XP_011 SLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE
20 30 40 50 60 70
60 70 80 90 100
pF1KE3 QQ-DREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA------WLLLPFFKRGTLWN
.. .: :. :..: .:::: : .: .:.:. .::: . .: : .
XP_011 EEKNRAIIQEVCFMKKLSGHPNI---VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE3 EIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMD
.......: :. : .: .. ::... .: . ::::: :.::...: : :
XP_011 FLKKMESRGP-LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE3 LGSMNQACIHVEGS----RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLG
.:: . . . : :.:: ... .. : ::.::.... :. : :. :.:.::
XP_011 FGSATTISHYPDYSWSAQRRAL-VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG
200 210 220 230 240 250
230 240 250 260 270 280
pF1KE3 CVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALRQLLNSMMTVDPHQRPH
:.:: . : . : :. : .. . :... ::: . .....:. .:. :.:..:
XP_011 CILYLLCFRQHP----FEDGAKLRI-VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLS
260 270 280 290 300
290 300
pF1KE3 IPLLLSQLEALQPPAPGQHTTQI
: .. ::. .
XP_011 IAEVVHQLQEIAAARNVNPKSPITELLEQNGGYGSATLSRGPPPPVGPAGSGYSGGLALA
310 320 330 340 350 360
305 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:09:04 2016 done: Sun Nov 6 05:09:05 2016
Total Scan time: 6.520 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]